RNA–Protein interactions for RNA: ENST00000559873.5

USP3-216, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-216ENST00000559873 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.8□□□□□ -1
USP3-216ENST00000559873 A0A1W2PR80 420 aa8.8□□□□□ -1
USP3-216ENST00000559873 SNTNA6NMZ2 147 aa8.8□□□□□ -1
USP3-216ENST00000559873 M0R1B8 84 aa8.8□□□□□ -1
USP3-216ENST00000559873 MPZL2O60487 215 aa8.8□□□□□ -1
USP3-216ENST00000559873 TMCC2O75069 709 aa8.8□□□□□ -1
USP3-216ENST00000559873 GLCEO94923 617 aa8.8□□□□□ -1
USP3-216ENST00000559873 HLA-HP01893 362 aa8.8□□□□□ -1
USP3-216ENST00000559873 CD3EP07766 207 aa8.8□□□□□ -1
USP3-216ENST00000559873 CBR1P16152 277 aa8.8□□□□□ -1
USP3-216ENST00000559873 FMO3P31513 532 aa8.8□□□□□ -1
USP3-216ENST00000559873 CDAP32320 146 aa8.8□□□□□ -1
USP3-216ENST00000559873 ZNF83P51522 516 aa8.8□□□□□ -1
USP3-216ENST00000559873 RPS7P62081 194 aaKnown RBP8.8□□□□□ -1
USP3-216ENST00000559873 RAB1AP62820 205 aa8.8□□□□□ -1
USP3-216ENST00000559873 KEAP1Q14145 624 aa8.8□□□□□ -1
USP3-216ENST00000559873 KLHL12Q53G59 568 aa8.8□□□□□ -1
USP3-216ENST00000559873 SLC35D3Q5M8T2 416 aa8.8□□□□□ -1
USP3-216ENST00000559873 TMEM236Q5W0B7 351 aa8.8□□□□□ -1
USP3-216ENST00000559873 LPCAT4Q643R3 524 aa8.8□□□□□ -1
USP3-216ENST00000559873 PLBD1Q6P4A8 553 aa8.8□□□□□ -1
USP3-216ENST00000559873 MDP1Q86V88 176 aa8.8□□□□□ -1
USP3-216ENST00000559873 TMEM200AQ86VY9 491 aa8.8□□□□□ -1
USP3-216ENST00000559873 GID4Q8IVV7 300 aa8.8□□□□□ -1
USP3-216ENST00000559873 SKA3Q8IX90 412 aa8.8□□□□□ -1
USP3-216ENST00000559873 ALDH16A1Q8IZ83 802 aa8.8□□□□□ -1
USP3-216ENST00000559873 LRRC18Q8N456 261 aa8.8□□□□□ -1
USP3-216ENST00000559873 GALNT4Q8N4A0 578 aa8.8□□□□□ -1
USP3-216ENST00000559873 WDR31Q8NA23 367 aa8.8□□□□□ -1
USP3-216ENST00000559873 OR8J1Q8NGP2 316 aa8.8□□□□□ -1
USP3-216ENST00000559873 FAM81AQ8TBF8 368 aa8.8□□□□□ -1
USP3-216ENST00000559873 TRUB1Q8WWH5 349 aaKnown RBP8.8□□□□□ -1
USP3-216ENST00000559873 NABP1Q96AH0 204 aa8.8□□□□□ -1
USP3-216ENST00000559873 PIK3IP1Q96FE7 263 aa8.8□□□□□ -1
USP3-216ENST00000559873 RADILQ96JH8 1075 aa8.8□□□□□ -1
USP3-216ENST00000559873 HRASLS5Q96KN8 279 aa8.8□□□□□ -1
USP3-216ENST00000559873 TSSK2Q96PF2 358 aa8.8□□□□□ -1
USP3-216ENST00000559873 DDOQ99489 341 aa8.8□□□□□ -1
USP3-216ENST00000559873 SLC29A1Q99808 456 aa8.8□□□□□ -1
USP3-216ENST00000559873 SH3GL3Q99963 347 aa8.8□□□□□ -1
USP3-216ENST00000559873 APOL4Q9BPW4 351 aa8.8□□□□□ -1
USP3-216ENST00000559873 CDADC1Q9BWV3 514 aa8.8□□□□□ -1
USP3-216ENST00000559873 NMNAT2Q9BZQ4 307 aa8.8□□□□□ -1
USP3-216ENST00000559873 GRIP2Q9C0E4 1043 aa8.8□□□□□ -1
USP3-216ENST00000559873 TOR3AQ9H497 397 aa8.8□□□□□ -1
USP3-216ENST00000559873 RNF115Q9Y4L5 304 aa8.8□□□□□ -1
USP3-216ENST00000559873 GMPPBQ9Y5P6 360 aa8.8□□□□□ -1
USP3-216ENST00000559873 SLC22A31A6NKX4 558 aa8.79□□□□□ -1
USP3-216ENST00000559873 FAM183AA6NL82 134 aa8.79□□□□□ -1
USP3-216ENST00000559873 TLX2O43763 284 aaPredicted RBP8.79□□□□□ -1
USP3-216ENST00000559873 ATP6V1G2O95670 118 aa8.79□□□□□ -1
USP3-216ENST00000559873 SNAP29O95721 258 aa8.79□□□□□ -1
USP3-216ENST00000559873 IGKV3-15P01624 115 aa8.79□□□□□ -1
USP3-216ENST00000559873 CRYAAP02489 173 aa8.79□□□□□ -1
USP3-216ENST00000559873 GAAP10253 952 aa8.79□□□□□ -1
USP3-216ENST00000559873 ZNF32P17041 273 aa8.79□□□□□ -1
USP3-216ENST00000559873 COL8A1P27658 744 aa8.79□□□□□ -1
USP3-216ENST00000559873 GSTT1P30711 240 aa8.79□□□□□ -1
USP3-216ENST00000559873 GGT2P36268 569 aa8.79□□□□□ -1
USP3-216ENST00000559873 IDH3GP51553 393 aaPredicted RBP8.79□□□□□ -1
USP3-216ENST00000559873 TUBA1BP68363 451 aa8.79□□□□□ -1
USP3-216ENST00000559873 TUBA4AP68366 448 aa8.79□□□□□ -1
USP3-216ENST00000559873 ADAM8P78325 824 aa8.79□□□□□ -1
USP3-216ENST00000559873 TLE4Q04727 773 aa8.79□□□□□ -1
USP3-216ENST00000559873 ETFDHQ16134 617 aa8.79□□□□□ -1
USP3-216ENST00000559873 KCNMB1Q16558 191 aa8.79□□□□□ -1
USP3-216ENST00000559873 ZIK1Q3SY52 487 aaPredicted RBP8.79□□□□□ -1
USP3-216ENST00000559873 ZNF362Q5T0B9 420 aaPredicted RBP8.79□□□□□ -1
USP3-216ENST00000559873 MEDAGQ5VYS4 303 aa8.79□□□□□ -1
USP3-216ENST00000559873 NXNL2Q5VZ03 156 aa8.79□□□□□ -1
USP3-216ENST00000559873 TTC23Q5W5X9 447 aa8.79□□□□□ -1
USP3-216ENST00000559873 TUBA1AQ71U36 451 aa8.79□□□□□ -1
USP3-216ENST00000559873 CPOQ8IVL8 374 aa8.79□□□□□ -1
USP3-216ENST00000559873 TCEANCQ8N8B7 351 aa8.79□□□□□ -1
USP3-216ENST00000559873 SETD9Q8NE22 299 aa8.79□□□□□ -1
USP3-216ENST00000559873 IL17RDQ8NFM7 739 aa8.79□□□□□ -1
USP3-216ENST00000559873 SLC26A10Q8NG04 563 aa8.79□□□□□ -1
USP3-216ENST00000559873 OR2AJ1Q8NGZ0 328 aa8.79□□□□□ -1
USP3-216ENST00000559873 TMEM163Q8TC26 289 aa8.79□□□□□ -1
USP3-216ENST00000559873 C11orf40Q8WZ69 217 aa8.79□□□□□ -1
USP3-216ENST00000559873 RFKQ969G6 155 aa8.79□□□□□ -1
USP3-216ENST00000559873 PLPPR2Q96GM1 343 aa8.79□□□□□ -1
USP3-216ENST00000559873 PITX2Q99697 317 aa8.79□□□□□ -1
USP3-216ENST00000559873 ZNF416Q9BWM5 594 aa8.79□□□□□ -1
USP3-216ENST00000559873 OR51V1Q9H2C8 321 aa8.79□□□□□ -1
USP3-216ENST00000559873 EMC7Q9NPA0 242 aa8.79□□□□□ -1
USP3-216ENST00000559873 HINT3Q9NQE9 182 aaKnown RBP8.79□□□□□ -1
USP3-216ENST00000559873 NPAP1Q9NZP6 1156 aa8.79□□□□□ -1
USP3-216ENST00000559873 CRNNQ9UBG3 495 aaPredicted RBP8.79□□□□□ -1
USP3-216ENST00000559873 ASH2LQ9UBL3 628 aa8.79□□□□□ -1
USP3-216ENST00000559873 NDRG4Q9ULP0 352 aaKnown RBP8.79□□□□□ -1
USP3-216ENST00000559873 TIMM10BQ9Y5J6 103 aa8.79□□□□□ -1
USP3-216ENST00000559873 UNC79Q9P2D8 2635 aa8.79□□□□□ -1
USP3-216ENST00000559873 ADGRG4Q8IZF6 3080 aa8.79□□□□□ -1
USP3-216ENST00000559873 ABCA4P78363 2273 aa8.78□□□□□ -1
USP3-216ENST00000559873 LOC100130705A0A1B0GUX0 176 aa8.78□□□□□ -1
USP3-216ENST00000559873 DEFB108AA8MXU0 73 aa8.78□□□□□ -1
USP3-216ENST00000559873 H0YJX3 145 aa8.78□□□□□ -1
USP3-216ENST00000559873 DCTN6O00399 190 aa8.78□□□□□ -1
USP3-216ENST00000559873 SLC16A6O15403 523 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms