RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 NMD3Q96D46 503 aaKnown RBP10.48□□□□□ -0.73
SPG11-219ENST00000559822 RAB39BQ96DA2 213 aa10.48□□□□□ -0.73
SPG11-219ENST00000559822 TIMD4Q96H15 378 aa10.48□□□□□ -0.73
SPG11-219ENST00000559822 FNDC11Q9BVV2 318 aa10.48□□□□□ -0.73
SPG11-219ENST00000559822 SAP30LQ9HAJ7 183 aa10.48□□□□□ -0.73
SPG11-219ENST00000559822 CYSLTR2Q9NS75 346 aa10.48□□□□□ -0.73
SPG11-219ENST00000559822 CGGBP1Q9UFW8 167 aaPredicted RBP10.48□□□□□ -0.73
SPG11-219ENST00000559822 A4GNTQ9UNA3 340 aa10.48□□□□□ -0.73
SPG11-219ENST00000559822 UGT2A1Q9Y4X1 527 aa10.48□□□□□ -0.73
SPG11-219ENST00000559822 A0A0A6YYJ9 748 aa10.47□□□□□ -0.73
SPG11-219ENST00000559822 TRAV20A0A0B4J274 112 aa10.47□□□□□ -0.73
SPG11-219ENST00000559822 IGHV1-69-2A0A0G2JMI3 117 aa10.47□□□□□ -0.73
SPG11-219ENST00000559822 C5orf49A4QMS7 147 aa10.47□□□□□ -0.73
SPG11-219ENST00000559822 CLDN25C9JDP6 229 aa10.47□□□□□ -0.73
SPG11-219ENST00000559822 H3BSA7 217 aa10.47□□□□□ -0.73
SPG11-219ENST00000559822 HAX1O00165 279 aa10.47□□□□□ -0.73
SPG11-219ENST00000559822 NDUFAB1O14561 156 aa10.47□□□□□ -0.73
SPG11-219ENST00000559822 GSTA4O15217 222 aa10.47□□□□□ -0.73
SPG11-219ENST00000559822 PIP5K1CO60331 668 aa10.47□□□□□ -0.73
SPG11-219ENST00000559822 CDC14BO60729 498 aa10.47□□□□□ -0.73
SPG11-219ENST00000559822 CST2P09228 141 aa10.47□□□□□ -0.73
SPG11-219ENST00000559822 CDAP32320 146 aa10.47□□□□□ -0.73
SPG11-219ENST00000559822 LIPAP38571 399 aa10.47□□□□□ -0.73
SPG11-219ENST00000559822 ZNF81P51508 661 aa10.47□□□□□ -0.73
SPG11-219ENST00000559822 CTXN1P60606 82 aa10.47□□□□□ -0.73
SPG11-219ENST00000559822 FMODQ06828 376 aa10.47□□□□□ -0.73
SPG11-219ENST00000559822 TRAM2Q15035 370 aa10.47□□□□□ -0.73
SPG11-219ENST00000559822 HFEQ30201 348 aa10.47□□□□□ -0.73
SPG11-219ENST00000559822 ZMAT1Q5H9K5 638 aa10.47□□□□□ -0.73
SPG11-219ENST00000559822 SLC25A47Q6Q0C1 308 aa10.47□□□□□ -0.73
SPG11-219ENST00000559822 RNF113BQ8IZP6 322 aaKnown RBP10.47□□□□□ -0.73
SPG11-219ENST00000559822 RP9Q8TA86 221 aaKnown RBP10.47□□□□□ -0.73
SPG11-219ENST00000559822 GEMIN6Q8WXD5 167 aaKnown RBP10.47□□□□□ -0.73
SPG11-219ENST00000559822 ELMOD3Q96FG2 381 aa10.47□□□□□ -0.73
SPG11-219ENST00000559822 POM121L2Q96KW2 1035 aa10.47□□□□□ -0.73
SPG11-219ENST00000559822 TSPAN32Q96QS1 320 aa10.47□□□□□ -0.73
SPG11-219ENST00000559822 WACQ9BTA9 647 aa10.47□□□□□ -0.73
SPG11-219ENST00000559822 ELOVL3Q9HB03 270 aa10.47□□□□□ -0.73
SPG11-219ENST00000559822 TREM2Q9NZC2 230 aa10.47□□□□□ -0.73
SPG11-219ENST00000559822 TIMM10BQ9Y5J6 103 aa10.47□□□□□ -0.73
SPG11-219ENST00000559822 SVEP1Q4LDE5 3571 aa10.46□□□□□ -0.73
SPG11-219ENST00000559822 EFCAB9A8MZ26 197 aa10.46□□□□□ -0.73
SPG11-219ENST00000559822 FAM157AC9JC47 383 aa10.46□□□□□ -0.73
SPG11-219ENST00000559822 ZNF682O95780 498 aa10.46□□□□□ -0.73
SPG11-219ENST00000559822 MSR1P21757 451 aa10.46□□□□□ -0.73
SPG11-219ENST00000559822 LAP3P28838 519 aa10.46□□□□□ -0.73
SPG11-219ENST00000559822 ARHGDIAP52565 204 aa10.46□□□□□ -0.73
SPG11-219ENST00000559822 ERVK-25P63136 954 aa10.46□□□□□ -0.73
SPG11-219ENST00000559822 PSG4Q00888 419 aa10.46□□□□□ -0.73
SPG11-219ENST00000559822 PRKCDQ05655 676 aa10.46□□□□□ -0.73
SPG11-219ENST00000559822 SLC3A1Q07837 685 aa10.46□□□□□ -0.73
SPG11-219ENST00000559822 IFI44LQ53G44 452 aa10.46□□□□□ -0.73
SPG11-219ENST00000559822 HSP90B2PQ58FF3 399 aa10.46□□□□□ -0.73
SPG11-219ENST00000559822 MBNL2Q5VZF2 373 aaKnown RBP10.46□□□□□ -0.73
SPG11-219ENST00000559822 ACSM5Q6NUN0 579 aa10.46□□□□□ -0.73
SPG11-219ENST00000559822 USP51Q70EK9 711 aa10.46□□□□□ -0.73
SPG11-219ENST00000559822 RRM2BQ7LG56 351 aa10.46□□□□□ -0.73
SPG11-219ENST00000559822 SYT9Q86SS6 491 aa10.46□□□□□ -0.73
SPG11-219ENST00000559822 OAFQ86UD1 273 aa10.46□□□□□ -0.73
SPG11-219ENST00000559822 CYP4Z1Q86W10 505 aa10.46□□□□□ -0.73
SPG11-219ENST00000559822 NRMQ8IXM6 262 aa10.46□□□□□ -0.73
SPG11-219ENST00000559822 RAB1CQ92928 201 aa10.46□□□□□ -0.73
SPG11-219ENST00000559822 RCN3Q96D15 328 aa10.46□□□□□ -0.73
SPG11-219ENST00000559822 LRRC37BQ96QE4 947 aa10.46□□□□□ -0.73
SPG11-219ENST00000559822 DIRC2Q96SL1 478 aa10.46□□□□□ -0.73
SPG11-219ENST00000559822 HOPXQ9BPY8 73 aaPredicted RBP10.46□□□□□ -0.73
SPG11-219ENST00000559822 OR2H1Q9GZK4 316 aa10.46□□□□□ -0.73
SPG11-219ENST00000559822 EGLN1Q9GZT9 426 aa10.46□□□□□ -0.73
SPG11-219ENST00000559822 OCEL1Q9H607 264 aa10.46□□□□□ -0.73
SPG11-219ENST00000559822 LPAR2Q9HBW0 351 aa10.46□□□□□ -0.73
SPG11-219ENST00000559822 NDRG4Q9ULP0 352 aaKnown RBP10.46□□□□□ -0.73
SPG11-219ENST00000559822 TRAV27A0A087WT01 109 aa10.45□□□□□ -0.74
SPG11-219ENST00000559822 IGKV1D-43A0A0B4J1Z2 117 aa10.45□□□□□ -0.74
SPG11-219ENST00000559822 A0A1W2PPL8 197 aa10.45□□□□□ -0.74
SPG11-219ENST00000559822 C12orf71A8MTZ7 269 aa10.45□□□□□ -0.74
SPG11-219ENST00000559822 CXCR6O00574 342 aa10.45□□□□□ -0.74
SPG11-219ENST00000559822 XKRYO14609 159 aa10.45□□□□□ -0.74
SPG11-219ENST00000559822 AHCYL1O43865 530 aa10.45□□□□□ -0.74
SPG11-219ENST00000559822 ICMTO60725 284 aa10.45□□□□□ -0.74
SPG11-219ENST00000559822 CCDC22O60826 627 aa10.45□□□□□ -0.74
SPG11-219ENST00000559822 PNPP00491 289 aa10.45□□□□□ -0.74
SPG11-219ENST00000559822 ITGA2P17301 1181 aa10.45□□□□□ -0.74
SPG11-219ENST00000559822 MAKP20794 623 aa10.45□□□□□ -0.74
SPG11-219ENST00000559822 TUBG1P23258 451 aa10.45□□□□□ -0.74
SPG11-219ENST00000559822 WNT5AP41221 380 aa10.45□□□□□ -0.74
SPG11-219ENST00000559822 LMO4P61968 165 aa10.45□□□□□ -0.74
SPG11-219ENST00000559822 SRSF2Q01130 221 aaKnown RBP10.45□□□□□ -0.74
SPG11-219ENST00000559822 MVKQ03426 396 aa10.45□□□□□ -0.74
SPG11-219ENST00000559822 GLO1Q04760 184 aa10.45□□□□□ -0.74
SPG11-219ENST00000559822 LIPEQ05469 1076 aa10.45□□□□□ -0.74
SPG11-219ENST00000559822 SF3A3Q12874 501 aaKnown RBP eCLIP10.45□□□□□ -0.743e-6■□□□□ 9.9
SPG11-219ENST00000559822 TSTQ16762 297 aaKnown RBP10.45□□□□□ -0.74
SPG11-219ENST00000559822 CGB2Q6NT52 195 aa10.45□□□□□ -0.74
SPG11-219ENST00000559822 ZNF730Q6ZMV8 503 aa10.45□□□□□ -0.74
SPG11-219ENST00000559822 FOXL2NBQ6ZUU3 175 aa10.45□□□□□ -0.74
SPG11-219ENST00000559822 FKBP9P1Q75LS8 142 aa10.45□□□□□ -0.74
SPG11-219ENST00000559822 ZER1Q7Z7L7 766 aa10.45□□□□□ -0.74
SPG11-219ENST00000559822 PEG10Q86TG7 708 aaKnown RBP10.45□□□□□ -0.74
SPG11-219ENST00000559822 ZNF101Q8IZC7 436 aa10.45□□□□□ -0.74
SPG11-219ENST00000559822 FAM156AQ8NDB6 213 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms