RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 HIDE1A8MVS5 230 aa1.74□□□□□ -2.13
VPS13C-207ENST00000558919 ERLIN2O94905 339 aa1.74□□□□□ -2.13
VPS13C-207ENST00000558919 UTS2O95399 124 aa1.74□□□□□ -2.13
VPS13C-207ENST00000558919 CDC20Q12834 499 aa1.74□□□□□ -2.13
VPS13C-207ENST00000558919 ZNF77Q15935 545 aa1.74□□□□□ -2.13
VPS13C-207ENST00000558919 IMMTQ16891 758 aaKnown RBP1.74□□□□□ -2.13
VPS13C-207ENST00000558919 RAET1LQ5VY80 246 aa1.74□□□□□ -2.13
VPS13C-207ENST00000558919 OR2A2Q6IF42 318 aa1.74□□□□□ -2.13
VPS13C-207ENST00000558919 KDM7AQ6ZMT4 941 aa1.74□□□□□ -2.13
VPS13C-207ENST00000558919 EGFL6Q8IUX8 553 aa1.74□□□□□ -2.13
VPS13C-207ENST00000558919 FAM110BQ8TC76 370 aa1.74□□□□□ -2.13
VPS13C-207ENST00000558919 FAM3DQ96BQ1 224 aa1.74□□□□□ -2.13
VPS13C-207ENST00000558919 PANX2Q96RD6 677 aa1.74□□□□□ -2.13
VPS13C-207ENST00000558919 TCHPQ9BT92 498 aa1.74□□□□□ -2.13
VPS13C-207ENST00000558919 TRIM62Q9BVG3 475 aa1.74□□□□□ -2.13
VPS13C-207ENST00000558919 SLC25A2Q9BXI2 301 aa1.74□□□□□ -2.13
VPS13C-207ENST00000558919 TMEM59Q9BXS4 323 aa1.74□□□□□ -2.13
VPS13C-207ENST00000558919 ANKRD19PQ9H560 264 aa1.74□□□□□ -2.13
VPS13C-207ENST00000558919 RPF2Q9H7B2 306 aaKnown RBP1.74□□□□□ -2.13
VPS13C-207ENST00000558919 HPCAL4Q9UM19 191 aa1.74□□□□□ -2.13
VPS13C-207ENST00000558919 PEX16Q9Y5Y5 336 aa1.74□□□□□ -2.13
VPS13C-207ENST00000558919 MRPS18BQ9Y676 258 aaKnown RBP1.74□□□□□ -2.13
VPS13C-207ENST00000558919 TNS2Q63HR2 1409 aa1.74□□□□□ -2.13
VPS13C-207ENST00000558919 SCN1AP35498 2009 aa1.73□□□□□ -2.13
VPS13C-207ENST00000558919 A8MUU9 505 aa1.73□□□□□ -2.13
VPS13C-207ENST00000558919 H0Y8G0 127 aa1.73□□□□□ -2.13
VPS13C-207ENST00000558919 HAS3O00219 553 aa1.73□□□□□ -2.13
VPS13C-207ENST00000558919 CCNE2O96020 404 aa1.73□□□□□ -2.13
VPS13C-207ENST00000558919 IL4P05112 153 aa1.73□□□□□ -2.13
VPS13C-207ENST00000558919 OR56A5P0C7T3 313 aa1.73□□□□□ -2.13
VPS13C-207ENST00000558919 C1GALT1C1LP0DN25 315 aa1.73□□□□□ -2.13
VPS13C-207ENST00000558919 SLC2A3P11169 496 aa1.73□□□□□ -2.13
VPS13C-207ENST00000558919 ATP1B2P14415 290 aaPredicted RBP1.73□□□□□ -2.13
VPS13C-207ENST00000558919 SULT1E1P49888 294 aa1.73□□□□□ -2.13
VPS13C-207ENST00000558919 ATP5IP56385 69 aaPredicted RBP1.73□□□□□ -2.13
VPS13C-207ENST00000558919 LRRC74BQ6ZQY2 392 aa1.73□□□□□ -2.13
VPS13C-207ENST00000558919 ASCL5Q7RTU5 278 aa1.73□□□□□ -2.13
VPS13C-207ENST00000558919 LRP11Q86VZ4 500 aa1.73□□□□□ -2.13
VPS13C-207ENST00000558919 NBPF5PQ86XG9 351 aaPredicted RBP1.73□□□□□ -2.13
VPS13C-207ENST00000558919 NECAB1Q8N987 351 aa1.73□□□□□ -2.13
VPS13C-207ENST00000558919 LINC00304Q8N9R0 145 aa1.73□□□□□ -2.13
VPS13C-207ENST00000558919 COQ8AQ8NI60 647 aa1.73□□□□□ -2.13
VPS13C-207ENST00000558919 C15orf40Q8WUR7 153 aa1.73□□□□□ -2.13
VPS13C-207ENST00000558919 STMN2Q93045 179 aa1.73□□□□□ -2.13
VPS13C-207ENST00000558919 IFT74Q96LB3 600 aa1.73□□□□□ -2.13
VPS13C-207ENST00000558919 ROPN1BQ9BZX4 212 aaPredicted RBP1.73□□□□□ -2.13
VPS13C-207ENST00000558919 DDX19AQ9NUU7 478 aaKnown RBP1.73□□□□□ -2.13
VPS13C-207ENST00000558919 SUN2Q9UH99 717 aa1.73□□□□□ -2.13
VPS13C-207ENST00000558919 ARHGEF35A5YM69 484 aa1.72□□□□□ -2.13
VPS13C-207ENST00000558919 BTBD17A6NE02 478 aa1.72□□□□□ -2.13
VPS13C-207ENST00000558919 FOXE1O00358 373 aaPredicted RBP1.72□□□□□ -2.13
VPS13C-207ENST00000558919 SOX15O60248 233 aa1.72□□□□□ -2.13
VPS13C-207ENST00000558919 HMMRO75330 724 aa1.72□□□□□ -2.13
VPS13C-207ENST00000558919 YIF1AO95070 293 aa1.72□□□□□ -2.13
VPS13C-207ENST00000558919 SNX4O95219 450 aa1.72□□□□□ -2.13
VPS13C-207ENST00000558919 C1orf105O95561 183 aa1.72□□□□□ -2.13
VPS13C-207ENST00000558919 NDUFB10O96000 172 aa1.72□□□□□ -2.13
VPS13C-207ENST00000558919 SERPINA3P01011 423 aa1.72□□□□□ -2.13
VPS13C-207ENST00000558919 CALM1P0DP23 149 aa1.72□□□□□ -2.13
VPS13C-207ENST00000558919 CALM2P0DP24 149 aa1.72□□□□□ -2.13
VPS13C-207ENST00000558919 CALM3P0DP25 149 aa1.72□□□□□ -2.13
VPS13C-207ENST00000558919 ETS2P15036 469 aa1.72□□□□□ -2.13
VPS13C-207ENST00000558919 NCF2P19878 526 aaPredicted RBP1.72□□□□□ -2.13
VPS13C-207ENST00000558919 TAGLN2P37802 199 aaKnown RBP1.72□□□□□ -2.13
VPS13C-207ENST00000558919 CEACAM6P40199 344 aa1.72□□□□□ -2.13
VPS13C-207ENST00000558919 OPRK1P41145 380 aa1.72□□□□□ -2.13
VPS13C-207ENST00000558919 AQP2P41181 271 aa1.72□□□□□ -2.13
VPS13C-207ENST00000558919 CRYBB2P43320 205 aa1.72□□□□□ -2.13
VPS13C-207ENST00000558919 ACTR3P61158 418 aa1.72□□□□□ -2.13
VPS13C-207ENST00000558919 HMGN5P82970 282 aaKnown RBP1.72□□□□□ -2.13
VPS13C-207ENST00000558919 PITPNAQ00169 270 aa1.72□□□□□ -2.13
VPS13C-207ENST00000558919 LRRC74AQ0VAA2 488 aa1.72□□□□□ -2.13
VPS13C-207ENST00000558919 BST1Q10588 318 aa1.72□□□□□ -2.13
VPS13C-207ENST00000558919 MAB21L1Q13394 359 aa1.72□□□□□ -2.13
VPS13C-207ENST00000558919 IRF4Q15306 451 aa1.72□□□□□ -2.13
VPS13C-207ENST00000558919 SSX2Q16385 188 aa1.72□□□□□ -2.13
VPS13C-207ENST00000558919 PRAMEF5Q5TYX0 476 aa1.72□□□□□ -2.13
VPS13C-207ENST00000558919 PRAMEF6Q5VXH4 476 aa1.72□□□□□ -2.13
VPS13C-207ENST00000558919 PRMT9Q6P2P2 845 aa1.72□□□□□ -2.13
VPS13C-207ENST00000558919 CEMP1Q6PRD7 247 aaPredicted RBP1.72□□□□□ -2.13
VPS13C-207ENST00000558919 UQCC3Q6UW78 93 aa1.72□□□□□ -2.13
VPS13C-207ENST00000558919 SLC25A48Q6ZT89 311 aaKnown RBP1.72□□□□□ -2.13
VPS13C-207ENST00000558919 OAFQ86UD1 273 aa1.72□□□□□ -2.13
VPS13C-207ENST00000558919 UBE2J2Q8N2K1 259 aa1.72□□□□□ -2.13
VPS13C-207ENST00000558919 N4BP2L2Q92802 583 aaPredicted RBP1.72□□□□□ -2.13
VPS13C-207ENST00000558919 FBXO32Q969P5 355 aa1.72□□□□□ -2.13
VPS13C-207ENST00000558919 PIK3IP1Q96FE7 263 aa1.72□□□□□ -2.13
VPS13C-207ENST00000558919 TPD52L3Q96J77 140 aa1.72□□□□□ -2.13
VPS13C-207ENST00000558919 PLEKHA8Q96JA3 519 aa1.72□□□□□ -2.13
VPS13C-207ENST00000558919 TCEANC2Q96MN5 208 aa1.72□□□□□ -2.13
VPS13C-207ENST00000558919 CAMK2N2Q96S95 79 aa1.72□□□□□ -2.13
VPS13C-207ENST00000558919 SULT4A1Q9BR01 284 aa1.72□□□□□ -2.13
VPS13C-207ENST00000558919 PKIBQ9C010 78 aa1.72□□□□□ -2.13
VPS13C-207ENST00000558919 SAV1Q9H4B6 383 aaPredicted RBP1.72□□□□□ -2.13
VPS13C-207ENST00000558919 NT5MQ9NPB1 228 aa1.72□□□□□ -2.13
VPS13C-207ENST00000558919 CTSFQ9UBX1 484 aa1.72□□□□□ -2.13
VPS13C-207ENST00000558919 IKZF2Q9UKS7 526 aa1.72□□□□□ -2.13
VPS13C-207ENST00000558919 AHDC1Q5TGY3 1603 aaPredicted RBP1.71□□□□□ -2.14
VPS13C-207ENST00000558919 IGKV3D-11A0A0A0MRZ8 115 aa1.71□□□□□ -2.14
VPS13C-207ENST00000558919 A0A0U1RQV1 116 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms