RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 BBS1Q8NFJ9 593 aa18.59■□□□□ 0.57
CASC4-204ENST00000557945 OR6K6Q8NGW6 343 aa18.59■□□□□ 0.57
CASC4-204ENST00000557945 TMEM163Q8TC26 289 aa18.59■□□□□ 0.57
CASC4-204ENST00000557945 FAM222BQ8WU58 562 aa18.59■□□□□ 0.57
CASC4-204ENST00000557945 ZNRF4Q8WWF5 429 aa18.59■□□□□ 0.57
CASC4-204ENST00000557945 PITX2Q99697 317 aa18.59■□□□□ 0.57
CASC4-204ENST00000557945 C1QTNF6Q9BXI9 259 aa18.59■□□□□ 0.57
CASC4-204ENST00000557945 SLC24A3Q9HC58 644 aa18.59■□□□□ 0.57
CASC4-204ENST00000557945 ZNF226Q9NYT6 803 aa18.59■□□□□ 0.57
CASC4-204ENST00000557945 NDRG4Q9ULP0 352 aaKnown RBP18.59■□□□□ 0.57
CASC4-204ENST00000557945 ARPC4-TTLL3A0A0A6YYG9 625 aa18.58■□□□□ 0.57
CASC4-204ENST00000557945 E9PQ18 207 aa18.58■□□□□ 0.57
CASC4-204ENST00000557945 SCG5P05408 212 aa18.58■□□□□ 0.57
CASC4-204ENST00000557945 PATE4P0C8F1 98 aa18.58■□□□□ 0.57
CASC4-204ENST00000557945 EPXP11678 715 aa18.58■□□□□ 0.57
CASC4-204ENST00000557945 RPS7P62081 194 aaKnown RBP18.58■□□□□ 0.57
CASC4-204ENST00000557945 FAM27BQ5VT28 67 aa18.58■□□□□ 0.57
CASC4-204ENST00000557945 UGT2A3Q6UWM9 527 aa18.58■□□□□ 0.57
CASC4-204ENST00000557945 ACBD4Q8NC06 268 aa18.58■□□□□ 0.57
CASC4-204ENST00000557945 C11orf40Q8WZ69 217 aa18.58■□□□□ 0.57
CASC4-204ENST00000557945 ANKHD1Q8IWZ3 2542 aaKnown RBP18.58■□□□□ 0.56
CASC4-204ENST00000557945 TVP23AA6NH52 213 aa18.57■□□□□ 0.56
CASC4-204ENST00000557945 SLC16A6O15403 523 aa18.57■□□□□ 0.56
CASC4-204ENST00000557945 GAAP10253 952 aa18.57■□□□□ 0.56
CASC4-204ENST00000557945 ZNF83P51522 516 aa18.57■□□□□ 0.56
CASC4-204ENST00000557945 EFNB1P98172 346 aa18.57■□□□□ 0.56
CASC4-204ENST00000557945 HSF2Q03933 536 aa18.57■□□□□ 0.56
CASC4-204ENST00000557945 SLC36A2Q495M3 483 aa18.57■□□□□ 0.56
CASC4-204ENST00000557945 TTC23Q5W5X9 447 aa18.57■□□□□ 0.56
CASC4-204ENST00000557945 SSX8Q7RTT4 187 aa18.57■□□□□ 0.56
CASC4-204ENST00000557945 BCDIN3DQ7Z5W3 292 aaKnown RBP18.57■□□□□ 0.56
CASC4-204ENST00000557945 MDP1Q86V88 176 aa18.57■□□□□ 0.56
CASC4-204ENST00000557945 DEPDC4Q8N2C3 294 aa18.57■□□□□ 0.56
CASC4-204ENST00000557945 OR10H5Q8NGA6 315 aa18.57■□□□□ 0.56
CASC4-204ENST00000557945 OR8J1Q8NGP2 316 aa18.57■□□□□ 0.56
CASC4-204ENST00000557945 UBE2FQ969M7 185 aa18.57■□□□□ 0.56
CASC4-204ENST00000557945 RNF121Q9H920 327 aa18.57■□□□□ 0.56
CASC4-204ENST00000557945 CCNB1IP1Q9NPC3 277 aa18.57■□□□□ 0.56
CASC4-204ENST00000557945 H2AFY2Q9P0M6 372 aaPredicted RBP18.57■□□□□ 0.56
CASC4-204ENST00000557945 POLR1DQ9Y2S0 133 aa18.57■□□□□ 0.56
CASC4-204ENST00000557945 COL12A1Q99715 3063 aa18.57■□□□□ 0.56
CASC4-204ENST00000557945 ZNF503-AS2A6NEH8 195 aa18.56■□□□□ 0.56
CASC4-204ENST00000557945 UBL3O95164 117 aa18.56■□□□□ 0.56
CASC4-204ENST00000557945 FMO3P31513 532 aa18.56■□□□□ 0.56
CASC4-204ENST00000557945 AQP4P55087 323 aa18.56■□□□□ 0.56
CASC4-204ENST00000557945 TEKQ02763 1124 aa18.56■□□□□ 0.56
CASC4-204ENST00000557945 KEAP1Q14145 624 aa18.56■□□□□ 0.56
CASC4-204ENST00000557945 MEP1BQ16820 701 aa18.56■□□□□ 0.56
CASC4-204ENST00000557945 SLC26A10Q8NG04 563 aa18.56■□□□□ 0.56
CASC4-204ENST00000557945 FGFBP3Q8TAT2 258 aa18.56■□□□□ 0.56
CASC4-204ENST00000557945 TRUB1Q8WWH5 349 aaKnown RBP18.56■□□□□ 0.56
CASC4-204ENST00000557945 APOL4Q9BPW4 351 aa18.56■□□□□ 0.56
CASC4-204ENST00000557945 ADI1Q9BV57 179 aa18.56■□□□□ 0.56
CASC4-204ENST00000557945 ZNF416Q9BWM5 594 aa18.56■□□□□ 0.56
CASC4-204ENST00000557945 NGBQ9NPG2 151 aa18.56■□□□□ 0.56
CASC4-204ENST00000557945 MOKQ9UQ07 419 aa18.56■□□□□ 0.56
CASC4-204ENST00000557945 C12orf71A8MTZ7 269 aa18.55■□□□□ 0.56
CASC4-204ENST00000557945 GLCEO94923 617 aa18.55■□□□□ 0.56
CASC4-204ENST00000557945 TFP02787 698 aa18.55■□□□□ 0.56
CASC4-204ENST00000557945 CST2P09228 141 aa18.55■□□□□ 0.56
CASC4-204ENST00000557945 ZNF823P16415 610 aa18.55■□□□□ 0.56
CASC4-204ENST00000557945 CAPGP40121 348 aa18.55■□□□□ 0.56
CASC4-204ENST00000557945 BLVRAP53004 296 aa18.55■□□□□ 0.56
CASC4-204ENST00000557945 APOFQ13790 326 aa18.55■□□□□ 0.56
CASC4-204ENST00000557945 ENDOGQ14249 297 aaKnown RBP18.55■□□□□ 0.56
CASC4-204ENST00000557945 KCNMB1Q16558 191 aa18.55■□□□□ 0.56
CASC4-204ENST00000557945 GSG1Q2KHT4 349 aa18.55■□□□□ 0.56
CASC4-204ENST00000557945 C1QTNF12Q5T7M4 302 aa18.55■□□□□ 0.56
CASC4-204ENST00000557945 TMEM53Q6P2H8 277 aa18.55■□□□□ 0.56
CASC4-204ENST00000557945 LYPD4Q6UWN0 246 aa18.55■□□□□ 0.56
CASC4-204ENST00000557945 DPPA2Q7Z7J5 298 aa18.55■□□□□ 0.56
CASC4-204ENST00000557945 ZNF511Q8NB15 262 aa18.55■□□□□ 0.56
CASC4-204ENST00000557945 ZMYND19Q96E35 227 aaPredicted RBP18.55■□□□□ 0.56
CASC4-204ENST00000557945 FBXO17Q96EF6 278 aa18.55■□□□□ 0.56
CASC4-204ENST00000557945 RASSF1Q9NS23 344 aa18.55■□□□□ 0.56
CASC4-204ENST00000557945 ZNF224Q9NZL3 707 aa18.55■□□□□ 0.56
CASC4-204ENST00000557945 KCNN3Q9UGI6 736 aa18.55■□□□□ 0.56
CASC4-204ENST00000557945 PRR14LQ5THK1 2151 aa18.55■□□□□ 0.56
CASC4-204ENST00000557945 PRODHO43272 600 aa18.55■□□□□ 0.56
CASC4-204ENST00000557945 RAB36O95755 333 aa18.55■□□□□ 0.56
CASC4-204ENST00000557945 CLIC3O95833 236 aa18.55■□□□□ 0.56
CASC4-204ENST00000557945 CRYGSP22914 178 aa18.55■□□□□ 0.56
CASC4-204ENST00000557945 GSTT1P30711 240 aa18.55■□□□□ 0.56
CASC4-204ENST00000557945 PCBD1P61457 104 aa18.55■□□□□ 0.56
CASC4-204ENST00000557945 LSM6P62312 80 aaKnown RBP18.55■□□□□ 0.56
CASC4-204ENST00000557945 RAB1AP62820 205 aa18.55■□□□□ 0.56
CASC4-204ENST00000557945 ADARB1P78563 741 aaKnown RBP18.55■□□□□ 0.56
CASC4-204ENST00000557945 SLC35D3Q5M8T2 416 aa18.55■□□□□ 0.56
CASC4-204ENST00000557945 LINC01590Q5TEZ4 76 aa18.55■□□□□ 0.56
CASC4-204ENST00000557945 AADACL4Q5VUY2 407 aa18.55■□□□□ 0.56
CASC4-204ENST00000557945 NXNL2Q5VZ03 156 aa18.55■□□□□ 0.56
CASC4-204ENST00000557945 IZUMO2Q6UXV1 221 aa18.55■□□□□ 0.56
CASC4-204ENST00000557945 B3GLCTQ6Y288 498 aa18.55■□□□□ 0.56
CASC4-204ENST00000557945 CDADC1Q9BWV3 514 aa18.55■□□□□ 0.56
CASC4-204ENST00000557945 NOX3Q9HBY0 568 aa18.55■□□□□ 0.56
CASC4-204ENST00000557945 MRPL22Q9NWU5 206 aaKnown RBP18.55■□□□□ 0.56
CASC4-204ENST00000557945 B3GNT2Q9NY97 397 aa18.55■□□□□ 0.56
CASC4-204ENST00000557945 NPAP1Q9NZP6 1156 aa18.55■□□□□ 0.56
CASC4-204ENST00000557945 DNAJC27Q9NZQ0 273 aa18.55■□□□□ 0.56
CASC4-204ENST00000557945 ADGRG4Q8IZF6 3080 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms