RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 CD53P19397 219 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 ENPP1P22413 925 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 GDF1P27539 372 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 CRABP1P29762 137 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 SDC2P34741 201 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 CASRP41180 1078 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 CENPAP49450 140 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 AGFG1P52594 562 aaKnown RBP6.55□□□□□ -1.36
SPG11-204ENST00000557866 GBX2P52951 348 aaPredicted RBP6.55□□□□□ -1.36
SPG11-204ENST00000557866 GFRA1P56159 465 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 CAV3P56539 151 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 TAS2R43P59537 309 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 NANOS3P60323 173 aaKnown RBP6.55□□□□□ -1.36
SPG11-204ENST00000557866 RPS11P62280 158 aaKnown RBP eCLIP6.55□□□□□ -1.36
SPG11-204ENST00000557866 ACTA2P62736 377 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 ACTG2P63267 376 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 SIRPAP78324 504 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 MFAP5Q13361 173 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 DYNC1I2Q13409 638 aaKnown RBP6.55□□□□□ -1.36
SPG11-204ENST00000557866 CAMK2DQ13557 499 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 CDK5R1Q15078 307 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 TOMM20Q15388 145 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 FAM27D1Q5T7N8 215 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 LIPNQ5VXI9 398 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 SLC25A47Q6Q0C1 308 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 LINC00299Q6ZSB3 139 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 DPY19L4Q7Z388 723 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.55□□□□□ -1.36
SPG11-204ENST00000557866 ZIC4Q8N9L1 334 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 OR13C5Q8NGS8 318 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 OR6X1Q8NH79 312 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 OR14L1PQ8NHC6 308 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 MCFD2Q8NI22 146 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 ABHD4Q8TB40 342 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 SNX33Q8WV41 574 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 HSD17B8Q92506 261 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 GHSRQ92847 366 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 MAP6Q96JE9 813 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 KCTD7Q96MP8 289 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 SFXN2Q96NB2 322 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 COQ7Q99807 217 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 MED18Q9BUE0 208 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 MMP27Q9H306 513 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 ZNF703Q9H7S9 590 aaPredicted RBP6.55□□□□□ -1.36
SPG11-204ENST00000557866 SIAEQ9HAT2 523 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 PLGRKTQ9HBL7 147 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 SNTG1Q9NSN8 517 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 QPCTLQ9NXS2 382 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 ABI3Q9P2A4 366 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 BOKQ9UMX3 212 aaPredicted RBP6.55□□□□□ -1.36
SPG11-204ENST00000557866 RASD1Q9Y272 281 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 A3GALT2U3KPV4 340 aa6.55□□□□□ -1.36
SPG11-204ENST00000557866 MPDZO75970 2070 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 RIF1Q5UIP0 2472 aaKnown RBP6.54□□□□□ -1.36
SPG11-204ENST00000557866 A0A1B0GTH9 108 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 SMIM30A4D0T7 59 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 OR5H15A6NDH6 313 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 TRABD2BA6NFA1 517 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 FAM166BA8MTA8 275 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 CTDSP2O14595 271 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 SMAD9O15198 467 aaKnown RBP6.54□□□□□ -1.36
SPG11-204ENST00000557866 SEC14L5O43304 696 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 NME2P1O60361 137 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 IL1AP01583 271 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 HPNP05981 417 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 CD1AP06126 327 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 SP1P08047 785 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 GALP22466 123 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 EDNRAP25101 427 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 CAPZA2P47755 286 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 GDI2P50395 445 aaKnown RBP6.54□□□□□ -1.36
SPG11-204ENST00000557866 CLDN17P56750 224 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 RAC3P60763 192 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 MXD1Q05195 221 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 EGR3Q06889 387 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 DCTN2Q13561 401 aaKnown RBP6.54□□□□□ -1.36
SPG11-204ENST00000557866 SLC17A1Q14916 467 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 PCK2Q16822 640 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 ZNF829Q3KNS6 432 aaPredicted RBP6.54□□□□□ -1.36
SPG11-204ENST00000557866 PHYHD1Q5SRE7 291 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 AGAP7PQ5VUJ5 663 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 CARD17Q5XLA6 110 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 TMEM225Q6GV28 225 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 SLC25A25Q6KCM7 469 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 RPL22L1Q6P5R6 122 aaKnown RBP6.54□□□□□ -1.36
SPG11-204ENST00000557866 UNQ9370/PRO34162Q6UXP9 181 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 CREB3L2Q70SY1 520 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 GALNTL5Q7Z4T8 443 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 GPAT4Q86UL3 456 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 TMEM251Q8N6I4 163 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 NOXO1Q8NFA2 376 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 SLC26A10Q8NG04 563 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 OR9K2Q8NGE7 335 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 OR2V1Q8NHB1 315 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 OTOSQ8NHW6 89 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 THEM6Q8WUY1 208 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 KCNE4Q8WWG9 221 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 C11orf40Q8WZ69 217 aa6.54□□□□□ -1.36
SPG11-204ENST00000557866 RGP1Q92546 391 aaPredicted RBP6.54□□□□□ -1.36
SPG11-204ENST00000557866 NSMAFQ92636 917 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms