RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 VIMP08670 466 aaKnown RBP13.52□□□□□ -0.25
SCFD1-224ENST00000557713 GATA3P23771 443 aa13.52□□□□□ -0.25
SCFD1-224ENST00000557713 GCH1P30793 250 aa13.52□□□□□ -0.25
SCFD1-224ENST00000557713 FMODQ06828 376 aa13.52□□□□□ -0.25
SCFD1-224ENST00000557713 LAPTM4AQ15012 233 aa13.52□□□□□ -0.25
SCFD1-224ENST00000557713 SGCAQ16586 387 aa13.52□□□□□ -0.25
SCFD1-224ENST00000557713 SPATA46Q5T0L3 261 aa13.52□□□□□ -0.25
SCFD1-224ENST00000557713 SLC25A47Q6Q0C1 308 aa13.52□□□□□ -0.25
SCFD1-224ENST00000557713 ZDHHC22Q8N966 263 aa13.52□□□□□ -0.25
SCFD1-224ENST00000557713 SLC25A40Q8TBP6 338 aa13.52□□□□□ -0.25
SCFD1-224ENST00000557713 KLF14Q8TD94 323 aaPredicted RBP13.52□□□□□ -0.25
SCFD1-224ENST00000557713 TMEM239Q8WW34 195 aa13.52□□□□□ -0.25
SCFD1-224ENST00000557713 IPCEF1Q8WWN9 437 aaPredicted RBP13.52□□□□□ -0.25
SCFD1-224ENST00000557713 OR2J1Q9GZK6 312 aa13.52□□□□□ -0.25
SCFD1-224ENST00000557713 POLR2J2Q9GZM3 115 aaKnown RBP13.52□□□□□ -0.25
SCFD1-224ENST00000557713 POLR2J3Q9H1A7 115 aaKnown RBP13.52□□□□□ -0.25
SCFD1-224ENST00000557713 C7orf69Q9H7B7 122 aa13.52□□□□□ -0.25
SCFD1-224ENST00000557713 ESM1Q9NQ30 184 aa13.52□□□□□ -0.25
SCFD1-224ENST00000557713 STX18Q9P2W9 335 aaKnown RBP13.52□□□□□ -0.25
SCFD1-224ENST00000557713 EIF3KQ9UBQ5 218 aaKnown RBP13.52□□□□□ -0.25
SCFD1-224ENST00000557713 RIMS3Q9UJD0 308 aa13.52□□□□□ -0.25
SCFD1-224ENST00000557713 ZSCAN5BA6NJL1 495 aa13.51□□□□□ -0.25
SCFD1-224ENST00000557713 ICMTO60725 284 aa13.51□□□□□ -0.25
SCFD1-224ENST00000557713 OR5F1O95221 314 aa13.51□□□□□ -0.25
SCFD1-224ENST00000557713 TNFRSF1BP20333 461 aa13.51□□□□□ -0.25
SCFD1-224ENST00000557713 GDI2P50395 445 aaKnown RBP13.51□□□□□ -0.25
SCFD1-224ENST00000557713 TAS2R41P59536 307 aa13.51□□□□□ -0.25
SCFD1-224ENST00000557713 PIN1Q13526 163 aaPredicted RBP13.51□□□□□ -0.25
SCFD1-224ENST00000557713 SPRNQ5BIV9 151 aa13.51□□□□□ -0.25
SCFD1-224ENST00000557713 NANOGP8Q6NSW7 305 aa13.51□□□□□ -0.25
SCFD1-224ENST00000557713 CALHM3Q86XJ0 350 aa13.51□□□□□ -0.25
SCFD1-224ENST00000557713 C1orf174Q8IYL3 243 aa13.51□□□□□ -0.25
SCFD1-224ENST00000557713 AKR7LQ8NHP1 331 aa13.51□□□□□ -0.25
SCFD1-224ENST00000557713 THOC1Q96FV9 657 aaKnown RBP13.51□□□□□ -0.25
SCFD1-224ENST00000557713 ATP6V1G3Q96LB4 118 aa13.51□□□□□ -0.25
SCFD1-224ENST00000557713 TXNIPQ9H3M7 391 aa13.51□□□□□ -0.25
SCFD1-224ENST00000557713 CYSLTR2Q9NS75 346 aa13.51□□□□□ -0.25
SCFD1-224ENST00000557713 BAG5Q9UL15 447 aa13.51□□□□□ -0.25
SCFD1-224ENST00000557713 PLSCR5A0PG75 271 aa13.5□□□□□ -0.25
SCFD1-224ENST00000557713 FBP2O00757 339 aa13.5□□□□□ -0.25
SCFD1-224ENST00000557713 SHOX2O60902 331 aaPredicted RBP13.5□□□□□ -0.25
SCFD1-224ENST00000557713 NGFP01138 241 aa13.5□□□□□ -0.25
SCFD1-224ENST00000557713 CD55P08174 381 aa13.5□□□□□ -0.25
SCFD1-224ENST00000557713 THRBP10828 461 aa13.5□□□□□ -0.25
SCFD1-224ENST00000557713 LIPAP38571 399 aa13.5□□□□□ -0.25
SCFD1-224ENST00000557713 ERVK-25P63136 954 aa13.5□□□□□ -0.25
SCFD1-224ENST00000557713 SLC3A1Q07837 685 aa13.5□□□□□ -0.25
SCFD1-224ENST00000557713 TUSC1Q2TAM9 212 aa13.5□□□□□ -0.25
SCFD1-224ENST00000557713 TTMPQ5BVD1 217 aa13.5□□□□□ -0.25
SCFD1-224ENST00000557713 UNQ6126/PRO20091Q6UXV3 157 aa13.5□□□□□ -0.25
SCFD1-224ENST00000557713 RFPL4BQ6ZWI9 263 aa13.5□□□□□ -0.25
SCFD1-224ENST00000557713 BPIFB2Q8N4F0 458 aa13.5□□□□□ -0.25
SCFD1-224ENST00000557713 DYDC1Q8WWB3 177 aa13.5□□□□□ -0.25
SCFD1-224ENST00000557713 NSMAFQ92636 917 aa13.5□□□□□ -0.25
SCFD1-224ENST00000557713 DVL3Q92997 716 aaPredicted RBP13.5□□□□□ -0.25
SCFD1-224ENST00000557713 GAL3ST1Q99999 423 aa13.5□□□□□ -0.25
SCFD1-224ENST00000557713 OR2H1Q9GZK4 316 aa13.5□□□□□ -0.25
SCFD1-224ENST00000557713 EGLN1Q9GZT9 426 aa13.5□□□□□ -0.25
SCFD1-224ENST00000557713 WNT5BQ9H1J7 359 aa13.5□□□□□ -0.25
SCFD1-224ENST00000557713 ZDHHC8Q9ULC8 765 aa13.5□□□□□ -0.25
SCFD1-224ENST00000557713 HIF3AQ9Y2N7 669 aa13.5□□□□□ -0.25
SCFD1-224ENST00000557713 MEGF8Q7Z7M0 2845 aa13.49□□□□□ -0.25
SCFD1-224ENST00000557713 PPIAL4EA0A075B759 164 aa13.49□□□□□ -0.25
SCFD1-224ENST00000557713 PPIAL4CA0A0B4J2A2 164 aa13.49□□□□□ -0.25
SCFD1-224ENST00000557713 PPIAL4DF5H284 164 aa13.49□□□□□ -0.25
SCFD1-224ENST00000557713 H3BSA7 217 aa13.49□□□□□ -0.25
SCFD1-224ENST00000557713 PRSS23O95084 383 aa13.49□□□□□ -0.25
SCFD1-224ENST00000557713 CST2P09228 141 aa13.49□□□□□ -0.25
SCFD1-224ENST00000557713 PPIAL4FP0DN26 164 aa13.49□□□□□ -0.25
SCFD1-224ENST00000557713 FPR2P25090 351 aa13.49□□□□□ -0.25
SCFD1-224ENST00000557713 ZFP36P26651 326 aaKnown RBP13.49□□□□□ -0.25
SCFD1-224ENST00000557713 LAP3P28838 519 aa13.49□□□□□ -0.25
SCFD1-224ENST00000557713 PPP1CBP62140 327 aa13.49□□□□□ -0.25
SCFD1-224ENST00000557713 UBA52P62987 128 aaKnown RBP13.49□□□□□ -0.25
SCFD1-224ENST00000557713 LCN2P80188 198 aa13.49□□□□□ -0.25
SCFD1-224ENST00000557713 CD47Q08722 323 aa13.49□□□□□ -0.25
SCFD1-224ENST00000557713 CYLC2Q14093 348 aaPredicted RBP13.49□□□□□ -0.25
SCFD1-224ENST00000557713 TAF11Q15544 211 aa13.49□□□□□ -0.25
SCFD1-224ENST00000557713 AWAT1Q58HT5 328 aa13.49□□□□□ -0.25
SCFD1-224ENST00000557713 RABL3Q5HYI8 236 aa13.49□□□□□ -0.25
SCFD1-224ENST00000557713 FOXL2NBQ6ZUU3 175 aa13.49□□□□□ -0.25
SCFD1-224ENST00000557713 ALDH16A1Q8IZ83 802 aa13.49□□□□□ -0.25
SCFD1-224ENST00000557713 CLDN22Q8N7P3 220 aa13.49□□□□□ -0.25
SCFD1-224ENST00000557713 ABHD4Q8TB40 342 aa13.49□□□□□ -0.25
SCFD1-224ENST00000557713 RBP7Q96R05 134 aa13.49□□□□□ -0.25
SCFD1-224ENST00000557713 DIRC2Q96SL1 478 aa13.49□□□□□ -0.25
SCFD1-224ENST00000557713 ALG12Q9BV10 488 aa13.49□□□□□ -0.25
SCFD1-224ENST00000557713 CGGBP1Q9UFW8 167 aaPredicted RBP13.49□□□□□ -0.25
SCFD1-224ENST00000557713 MED31Q9Y3C7 131 aa13.49□□□□□ -0.25
SCFD1-224ENST00000557713 TIMM10BQ9Y5J6 103 aa13.49□□□□□ -0.25
SCFD1-224ENST00000557713 GMNCA6NCL1 334 aa13.48□□□□□ -0.25
SCFD1-224ENST00000557713 NR2C1P13056 603 aa13.48□□□□□ -0.25
SCFD1-224ENST00000557713 OR1E2P47887 323 aa13.48□□□□□ -0.25
SCFD1-224ENST00000557713 RPL27P61353 136 aaKnown RBP13.48□□□□□ -0.25
SCFD1-224ENST00000557713 ALG10Q5BKT4 473 aa13.48□□□□□ -0.25
SCFD1-224ENST00000557713 METTL21CQ5VZV1 264 aa13.48□□□□□ -0.25
SCFD1-224ENST00000557713 ZNF771Q7L3S4 317 aaPredicted RBP13.48□□□□□ -0.25
SCFD1-224ENST00000557713 TREML1Q86YW5 311 aa13.48□□□□□ -0.25
SCFD1-224ENST00000557713 GEMIN6Q8WXD5 167 aaKnown RBP13.48□□□□□ -0.25
SCFD1-224ENST00000557713 C22orf15Q8WYQ4 148 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms