RNA–Protein interactions for RNA: ENST00000557572.1

FOXN3-217, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-217ENST00000557572 NUDT4Q9NZJ9 180 aa2.73□□□□□ -1.97
FOXN3-217ENST00000557572 WRAP73Q9P2S5 460 aaPredicted RBP2.73□□□□□ -1.97
FOXN3-217ENST00000557572 EIF3KQ9UBQ5 218 aaKnown RBP2.73□□□□□ -1.97
FOXN3-217ENST00000557572 DUX4Q9UBX2 424 aa2.73□□□□□ -1.97
FOXN3-217ENST00000557572 DHRS7Q9Y394 339 aa2.73□□□□□ -1.97
FOXN3-217ENST00000557572 POLR3HQ9Y535 204 aaPredicted RBP2.73□□□□□ -1.97
FOXN3-217ENST00000557572 CNTNAP1P78357 1384 aa2.73□□□□□ -1.97
FOXN3-217ENST00000557572 ABCB11O95342 1321 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 USP42Q9H9J4 1324 aaKnown RBP2.72□□□□□ -1.97
FOXN3-217ENST00000557572 IGLV3-22A0A075B6J6 115 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 TRBV7-9A0A0J9YWB2 115 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 A0A1B0GTH9 108 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.72□□□□□ -1.97
FOXN3-217ENST00000557572 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.72□□□□□ -1.97
FOXN3-217ENST00000557572 TSPAN11A1L157 253 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 ARGFXA6NJG6 315 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 OR5B21A6NL26 309 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 ZNF724A8MTY0 619 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 IDSB3KWA1 339 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 TRDCB7Z8K6 153 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 E5RI56 91 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 NEDD8-MDP1E9PL57 170 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 GOLGA6L19H0YKK7 550 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 PDHXO00330 501 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 PLPP3O14495 311 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 MAGEB4O15481 346 aaPredicted RBP2.72□□□□□ -1.97
FOXN3-217ENST00000557572 FGF16O43320 207 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 ENSAO43768 121 aaKnown RBP2.72□□□□□ -1.97
FOXN3-217ENST00000557572 MPDU1O75352 247 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 CLDN11O75508 207 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 CDK2AP2O75956 126 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 TDP2O95551 362 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 IFNA14P01570 189 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 CATP04040 527 aaKnown RBP2.72□□□□□ -1.97
FOXN3-217ENST00000557572 TCRBP04435 133 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 FRMD6-AS1P0C7T7 363 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 DNAH10OSP0CZ25 163 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 CSNK2A2P19784 350 aaPredicted RBP2.72□□□□□ -1.97
FOXN3-217ENST00000557572 CA6P23280 308 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 MSNP26038 577 aaKnown RBP2.72□□□□□ -1.97
FOXN3-217ENST00000557572 RANBP1P43487 201 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 OR3A2P47893 321 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 IDH2P48735 452 aaKnown RBP2.72□□□□□ -1.97
FOXN3-217ENST00000557572 DNASE1L1P49184 302 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 CLDN6P56747 220 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 CLDN12P56749 244 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 MRPS25P82663 173 aaKnown RBP2.72□□□□□ -1.97
FOXN3-217ENST00000557572 DYNC1I2Q13409 638 aaKnown RBP2.72□□□□□ -1.97
FOXN3-217ENST00000557572 OR5I1Q13606 314 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 DPYSL3Q14195 570 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 TMEM187Q14656 261 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 MTF1Q14872 753 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 ABRAXAS2Q15018 415 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 OXA1LQ15070 435 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 TRIM16LQ309B1 348 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 RFTN2Q52LD8 501 aaPredicted RBP2.72□□□□□ -1.97
FOXN3-217ENST00000557572 EIPR1Q53HC9 387 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 ATP1A1-AS1Q5TC04 95 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 DUPD1Q68J44 220 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 COX15Q7KZN9 410 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 FAM19A1Q7Z5A9 133 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 CMC1Q7Z7K0 106 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 ISCA2Q86U28 154 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 TAC4Q86UU9 113 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 FAM71AQ8IYT1 594 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 CIARTQ8N365 385 aaPredicted RBP2.72□□□□□ -1.97
FOXN3-217ENST00000557572 BPIFB2Q8N4F0 458 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 TMEM251Q8N6I4 163 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 OR1K1Q8NGR3 316 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 OR6K2Q8NGY2 324 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 GATAD1Q8WUU5 269 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 DYRK2Q92630 601 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 UFD1Q92890 307 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 OMA1Q96E52 524 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 DYNLL2Q96FJ2 89 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 ITCHQ96J02 903 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 FAM218AQ96MZ4 157 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 NKX3-1Q99801 234 aaPredicted RBP2.72□□□□□ -1.97
FOXN3-217ENST00000557572 CIB1Q99828 191 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 PSD2Q9BQI7 771 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 CABLES2Q9BTV7 478 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 NAT10Q9H0A0 1025 aaKnown RBP2.72□□□□□ -1.97
FOXN3-217ENST00000557572 ING2Q9H160 280 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 ARMC7Q9H6L4 198 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 TMBIM4Q9HC24 238 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 ZDHHC4Q9NPG8 344 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 TAS2R16Q9NYV7 291 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 GALPQ9UBC7 116 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 C19orf25Q9UFG5 118 aaPredicted RBP2.72□□□□□ -1.97
FOXN3-217ENST00000557572 MAN1B1Q9UKM7 699 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 RALYQ9UKM9 306 aaKnown RBP2.72□□□□□ -1.97
FOXN3-217ENST00000557572 UBQLN1Q9UMX0 589 aaKnown RBP2.72□□□□□ -1.97
FOXN3-217ENST00000557572 SLC22A13Q9Y226 551 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 VDAC3Q9Y277 283 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 NTNG1Q9Y2I2 539 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 PPP2R2CQ9Y2T4 447 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 MMACHCQ9Y4U1 282 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 CACNG2Q9Y698 323 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 SAR1BQ9Y6B6 198 aa2.72□□□□□ -1.97
FOXN3-217ENST00000557572 PBRM1Q86U86 1689 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms