RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 ZNF321PQ8N8H1 164 aa3.44□□□□□ -1.86
PRPF39-212ENST00000557477 CLHC1Q8NHS4 586 aa3.44□□□□□ -1.86
PRPF39-212ENST00000557477 ZNF461Q8TAF7 563 aa3.44□□□□□ -1.86
PRPF39-212ENST00000557477 RAB3IL1Q8TBN0 382 aa3.44□□□□□ -1.86
PRPF39-212ENST00000557477 SLC2A14Q8TDB8 520 aa3.44□□□□□ -1.86
PRPF39-212ENST00000557477 FGF13Q92913 245 aa3.44□□□□□ -1.86
PRPF39-212ENST00000557477 FGF14Q92915 247 aa3.44□□□□□ -1.86
PRPF39-212ENST00000557477 LRRC39Q96DD0 335 aa3.44□□□□□ -1.86
PRPF39-212ENST00000557477 ZNF607Q96SK3 696 aa3.44□□□□□ -1.86
PRPF39-212ENST00000557477 SLC6A7Q99884 636 aa3.44□□□□□ -1.86
PRPF39-212ENST00000557477 CNPY3Q9BT09 278 aa3.44□□□□□ -1.86
PRPF39-212ENST00000557477 ZSCAN5AQ9BUG6 496 aa3.44□□□□□ -1.86
PRPF39-212ENST00000557477 EDEM2Q9BV94 578 aa3.44□□□□□ -1.86
PRPF39-212ENST00000557477 ZNF717Q9BY31 904 aaPredicted RBP3.44□□□□□ -1.86
PRPF39-212ENST00000557477 DEFB126Q9BYW3 111 aa3.44□□□□□ -1.86
PRPF39-212ENST00000557477 POLR1EQ9GZS1 481 aaKnown RBP3.44□□□□□ -1.86
PRPF39-212ENST00000557477 SPACA1Q9HBV2 294 aa3.44□□□□□ -1.86
PRPF39-212ENST00000557477 LZTFL1Q9NQ48 299 aa3.44□□□□□ -1.86
PRPF39-212ENST00000557477 AGPAT3Q9NRZ7 376 aa3.44□□□□□ -1.86
PRPF39-212ENST00000557477 NUDT15Q9NV35 164 aa3.44□□□□□ -1.86
PRPF39-212ENST00000557477 ADAM22Q9P0K1 906 aa3.44□□□□□ -1.86
PRPF39-212ENST00000557477 UVRAGQ9P2Y5 699 aa3.44□□□□□ -1.86
PRPF39-212ENST00000557477 RPL26L1Q9UNX3 145 aaKnown RBP3.44□□□□□ -1.86
PRPF39-212ENST00000557477 MRPS33Q9Y291 106 aaKnown RBP3.44□□□□□ -1.86
PRPF39-212ENST00000557477 OARD1Q9Y530 152 aa3.44□□□□□ -1.86
PRPF39-212ENST00000557477 GVINP1Q7Z2Y8 2422 aa3.44□□□□□ -1.86
PRPF39-212ENST00000557477 CACNA1GO43497 2377 aa3.44□□□□□ -1.86
PRPF39-212ENST00000557477 DENND4AQ7Z401 1863 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 MIA3Q5JRA6 1907 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 LOXHD1Q8IVV2 1947 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 ARHGEF35A5YM69 484 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 TMEM150BA6NC51 233 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 GMNCA6NCL1 334 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 EFCAB10A6NFE3 127 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 ARL5CA6NH57 179 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 EVPLLA8MZ36 301 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 hCG_2039718K7EN88 272 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 CCRL2O00421 344 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 TOR1AO14656 332 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 CLOCKO15516 846 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 GMFGO60234 142 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 CCDC22O60826 627 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 GPX5O75715 221 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 SEMA3DO95025 777 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 APOC1P02654 83 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 SLC2A3P11169 496 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 ETS2P15036 469 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 TCP1P17987 556 aaKnown RBP3.43□□□□□ -1.86
PRPF39-212ENST00000557477 PGCP20142 388 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 RAB4AP20338 218 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 CXCR2P25025 360 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 OTX2P32243 289 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 CHI3L1P36222 383 aaPredicted RBP3.43□□□□□ -1.86
PRPF39-212ENST00000557477 TALDO1P37837 337 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 SLCO1A2P46721 670 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 CXCL12P48061 93 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 HCAR3P49019 387 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 GNG11P61952 73 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 RPL10AP62906 217 aaKnown RBP3.43□□□□□ -1.86
PRPF39-212ENST00000557477 ARHGAP19Q14CB8 494 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 ZMYND11Q15326 602 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 SF3A2Q15428 464 aaKnown RBP3.43□□□□□ -1.86
PRPF39-212ENST00000557477 TATDN3Q17R31 274 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 KCTD21Q4G0X4 260 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 UTF1Q5T230 341 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 C1orf185Q5T7R7 199 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 HES5Q5TA89 166 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 N4BP2L1Q5TBK1 243 aaPredicted RBP3.43□□□□□ -1.86
PRPF39-212ENST00000557477 RWDD4Q6NW29 188 aaKnown RBP3.43□□□□□ -1.86
PRPF39-212ENST00000557477 FAHD2BQ6P2I3 314 aaPredicted RBP3.43□□□□□ -1.86
PRPF39-212ENST00000557477 PRMT9Q6P2P2 845 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 BAIAP2L2Q6UXY1 529 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 NIPA1Q7RTP0 329 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 SETD3Q86TU7 594 aaPredicted RBP3.43□□□□□ -1.86
PRPF39-212ENST00000557477 ACOT1Q86TX2 421 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 RALGPS2Q86X27 583 aaPredicted RBP3.43□□□□□ -1.86
PRPF39-212ENST00000557477 LYG1Q8N1E2 194 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 GPR137CQ8N3F9 429 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 RIBC1Q8N443 379 aaPredicted RBP3.43□□□□□ -1.86
PRPF39-212ENST00000557477 LINC00612Q8N6U2 182 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 OR51G2Q8NGK0 314 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 ITFG1Q8TB96 612 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 MCOLN3Q8TDD5 553 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 MYDGFQ969H8 173 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 BORCS5Q969J3 196 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 FAHD2AQ96GK7 314 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 CPB2Q96IY4 423 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 DNAJC1Q96KC8 554 aaKnown RBP3.43□□□□□ -1.86
PRPF39-212ENST00000557477 SENP8Q96LD8 212 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 C12orf66Q96MD2 445 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 PAXXQ9BUH6 204 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 FRMD8P1Q9BZ68 369 aaPredicted RBP3.43□□□□□ -1.86
PRPF39-212ENST00000557477 CAB39LQ9H9S4 337 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 SIAEQ9HAT2 523 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 ZFP14Q9HCL3 533 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 RAB18Q9NP72 206 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 C20orf96Q9NUD7 363 aaPredicted RBP3.43□□□□□ -1.86
PRPF39-212ENST00000557477 DDX19AQ9NUU7 478 aaKnown RBP3.43□□□□□ -1.86
PRPF39-212ENST00000557477 PARVAQ9NVD7 372 aa3.43□□□□□ -1.86
PRPF39-212ENST00000557477 MARCH5Q9NX47 278 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms