RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 PQLC1Q8N2U9 271 aa15.21■□□□□ 0.03
SHMT2-225ENST00000556798 PARP8Q8N3A8 854 aa15.21■□□□□ 0.03
SHMT2-225ENST00000556798 OR9Q1Q8NGQ5 310 aa15.21■□□□□ 0.03
SHMT2-225ENST00000556798 MS4A3Q96HJ5 214 aa15.21■□□□□ 0.03
SHMT2-225ENST00000556798 DDOQ99489 341 aa15.21■□□□□ 0.03
SHMT2-225ENST00000556798 CIB1Q99828 191 aa15.21■□□□□ 0.03
SHMT2-225ENST00000556798 RNF121Q9H920 327 aa15.21■□□□□ 0.03
SHMT2-225ENST00000556798 TMEFF2Q9UIK5 374 aaPredicted RBP15.21■□□□□ 0.03
SHMT2-225ENST00000556798 KLHL21Q9UJP4 597 aa15.21■□□□□ 0.03
SHMT2-225ENST00000556798 RTTNQ86VV8 2226 aa15.2■□□□□ 0.02
SHMT2-225ENST00000556798 NOTCH2Q04721 2471 aa15.2■□□□□ 0.02
SHMT2-225ENST00000556798 PDZD2O15018 2839 aa15.2■□□□□ 0.02
SHMT2-225ENST00000556798 RIIAD1A6NNX1 92 aa15.2■□□□□ 0.02
SHMT2-225ENST00000556798 SHISA9B4DS77 424 aa15.2■□□□□ 0.02
SHMT2-225ENST00000556798 ATP6V1G2-DDX39BF2Z307 99 aa15.2■□□□□ 0.02
SHMT2-225ENST00000556798 IFNGP01579 166 aa15.2■□□□□ 0.02
SHMT2-225ENST00000556798 MSR1P21757 451 aa15.2■□□□□ 0.02
SHMT2-225ENST00000556798 IGFBP5P24593 272 aa15.2■□□□□ 0.02
SHMT2-225ENST00000556798 CRABP1P29762 137 aa15.2■□□□□ 0.02
SHMT2-225ENST00000556798 PYCR1P32322 319 aa15.2■□□□□ 0.02
SHMT2-225ENST00000556798 GUCA1AP43080 201 aaPredicted RBP15.2■□□□□ 0.02
SHMT2-225ENST00000556798 CRISP1P54107 249 aa15.2■□□□□ 0.02
SHMT2-225ENST00000556798 PPP2R2BQ00005 443 aa15.2■□□□□ 0.02
SHMT2-225ENST00000556798 ENDOGQ14249 297 aaKnown RBP15.2■□□□□ 0.02
SHMT2-225ENST00000556798 RAB39AQ14964 217 aa15.2■□□□□ 0.02
SHMT2-225ENST00000556798 FAM27BQ5VT28 67 aa15.2■□□□□ 0.02
SHMT2-225ENST00000556798 SLC22A25Q6T423 547 aa15.2■□□□□ 0.02
SHMT2-225ENST00000556798 GLB1L2Q8IW92 636 aa15.2■□□□□ 0.02
SHMT2-225ENST00000556798 LILRB1Q8NHL6 650 aaPredicted RBP15.2■□□□□ 0.02
SHMT2-225ENST00000556798 AKAP1Q92667 903 aaKnown RBP eCLIP15.2■□□□□ 0.02
SHMT2-225ENST00000556798 FBXO17Q96EF6 278 aa15.2■□□□□ 0.02
SHMT2-225ENST00000556798 RADILQ96JH8 1075 aa15.2■□□□□ 0.02
SHMT2-225ENST00000556798 ZNF75AQ96N20 296 aa15.2■□□□□ 0.02
SHMT2-225ENST00000556798 ZNF416Q9BWM5 594 aa15.2■□□□□ 0.02
SHMT2-225ENST00000556798 OSBPL10Q9BXB5 764 aa15.2■□□□□ 0.02
SHMT2-225ENST00000556798 CCNB1IP1Q9NPC3 277 aa15.2■□□□□ 0.02
SHMT2-225ENST00000556798 MOKQ9UQ07 419 aa15.2■□□□□ 0.02
SHMT2-225ENST00000556798 FAM183AA6NL82 134 aa15.19■□□□□ 0.02
SHMT2-225ENST00000556798 EI24O14681 340 aa15.19■□□□□ 0.02
SHMT2-225ENST00000556798 GYPBP06028 91 aa15.19■□□□□ 0.02
SHMT2-225ENST00000556798 MMP7P09237 267 aaPredicted RBP15.19■□□□□ 0.02
SHMT2-225ENST00000556798 GAAP10253 952 aa15.19■□□□□ 0.02
SHMT2-225ENST00000556798 ZNF14P17017 642 aaPredicted RBP15.19■□□□□ 0.02
SHMT2-225ENST00000556798 ZNF3P17036 446 aa15.19■□□□□ 0.02
SHMT2-225ENST00000556798 ZNF32P17041 273 aa15.19■□□□□ 0.02
SHMT2-225ENST00000556798 PAX7P23759 505 aa15.19■□□□□ 0.02
SHMT2-225ENST00000556798 EPHA2P29317 976 aa15.19■□□□□ 0.02
SHMT2-225ENST00000556798 CALCRP30988 508 aa15.19■□□□□ 0.02
SHMT2-225ENST00000556798 CDH11P55287 796 aa15.19■□□□□ 0.02
SHMT2-225ENST00000556798 CDK5Q00535 292 aa15.19■□□□□ 0.02
SHMT2-225ENST00000556798 NAAAQ02083 359 aa15.19■□□□□ 0.02
SHMT2-225ENST00000556798 MEP1BQ16820 701 aa15.19■□□□□ 0.02
SHMT2-225ENST00000556798 TMEM53Q6P2H8 277 aa15.19■□□□□ 0.02
SHMT2-225ENST00000556798 B3GLCTQ6Y288 498 aa15.19■□□□□ 0.02
SHMT2-225ENST00000556798 ZBTB46Q86UZ6 589 aa15.19■□□□□ 0.02
SHMT2-225ENST00000556798 ZNF584Q8IVC4 421 aa15.19■□□□□ 0.02
SHMT2-225ENST00000556798 FAM169BQ8N8A8 192 aa15.19■□□□□ 0.02
SHMT2-225ENST00000556798 OR51L1Q8NGJ5 315 aa15.19■□□□□ 0.02
SHMT2-225ENST00000556798 ZNRF4Q8WWF5 429 aa15.19■□□□□ 0.02
SHMT2-225ENST00000556798 C11orf40Q8WZ69 217 aa15.19■□□□□ 0.02
SHMT2-225ENST00000556798 RBM4BQ9BQ04 359 aaKnown RBP15.19■□□□□ 0.02
SHMT2-225ENST00000556798 RBM4Q9BWF3 364 aaKnown RBP15.19■□□□□ 0.02
SHMT2-225ENST00000556798 RACGAP1Q9H0H5 632 aa15.19■□□□□ 0.02
SHMT2-225ENST00000556798 KCNN2Q9H2S1 579 aa15.19■□□□□ 0.02
SHMT2-225ENST00000556798 MED20Q9H944 212 aa15.19■□□□□ 0.02
SHMT2-225ENST00000556798 SLC25A19Q9HC21 320 aa15.19■□□□□ 0.02
SHMT2-225ENST00000556798 MOV10Q9HCE1 1003 aaKnown RBP15.19■□□□□ 0.02
SHMT2-225ENST00000556798 CMC2Q9NRP2 79 aa15.19■□□□□ 0.02
SHMT2-225ENST00000556798 FKBP7Q9Y680 259 aa15.19■□□□□ 0.02
SHMT2-225ENST00000556798 SURF4O15260 269 aa15.18■□□□□ 0.02
SHMT2-225ENST00000556798 MGRN1O60291 552 aa15.18■□□□□ 0.02
SHMT2-225ENST00000556798 CST2P09228 141 aa15.18■□□□□ 0.02
SHMT2-225ENST00000556798 CLUP10909 449 aa15.18■□□□□ 0.02
SHMT2-225ENST00000556798 DAG1Q14118 895 aa15.18■□□□□ 0.02
SHMT2-225ENST00000556798 PTGES3Q15185 160 aaKnown RBP15.18■□□□□ 0.02
SHMT2-225ENST00000556798 RCN1Q15293 331 aa15.18■□□□□ 0.02
SHMT2-225ENST00000556798 C3orf36Q3SXR2 165 aa15.18■□□□□ 0.02
SHMT2-225ENST00000556798 ZNF672Q499Z4 452 aaPredicted RBP15.18■□□□□ 0.02
SHMT2-225ENST00000556798 DPPA2Q7Z7J5 298 aa15.18■□□□□ 0.02
SHMT2-225ENST00000556798 CBR4Q8N4T8 237 aa15.18■□□□□ 0.02
SHMT2-225ENST00000556798 PROKR2Q8NFJ6 384 aa15.18■□□□□ 0.02
SHMT2-225ENST00000556798 OTULINQ96BN8 352 aa15.18■□□□□ 0.02
SHMT2-225ENST00000556798 KCNS3Q9BQ31 491 aa15.18■□□□□ 0.02
SHMT2-225ENST00000556798 HCAR1Q9BXC0 346 aa15.18■□□□□ 0.02
SHMT2-225ENST00000556798 RIBC2Q9H4K1 309 aa15.18■□□□□ 0.02
SHMT2-225ENST00000556798 POU2F3Q9UKI9 436 aa15.18■□□□□ 0.02
SHMT2-225ENST00000556798 HS3ST1O14792 307 aa15.17■□□□□ 0.02
SHMT2-225ENST00000556798 HLA-DQA2P01906 255 aa15.17■□□□□ 0.02
SHMT2-225ENST00000556798 CRYAAP02489 173 aa15.17■□□□□ 0.02
SHMT2-225ENST00000556798 POLR2IP36954 125 aaKnown RBP15.17■□□□□ 0.02
SHMT2-225ENST00000556798 ESRRGP62508 458 aa15.17■□□□□ 0.02
SHMT2-225ENST00000556798 HSF2Q03933 536 aa15.17■□□□□ 0.02
SHMT2-225ENST00000556798 PABPC1L2AQ5JQF8 200 aa15.17■□□□□ 0.02
SHMT2-225ENST00000556798 LYPD4Q6UWN0 246 aa15.17■□□□□ 0.02
SHMT2-225ENST00000556798 PAMR1Q6UXH9 720 aa15.17■□□□□ 0.02
SHMT2-225ENST00000556798 SLC26A10Q8NG04 563 aa15.17■□□□□ 0.02
SHMT2-225ENST00000556798 OR2T4Q8NH00 348 aa15.17■□□□□ 0.02
SHMT2-225ENST00000556798 AKR7LQ8NHP1 331 aa15.17■□□□□ 0.02
SHMT2-225ENST00000556798 NMNAT2Q9BZQ4 307 aa15.17■□□□□ 0.02
SHMT2-225ENST00000556798 TVP23BQ9NYZ1 205 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms