RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 TAS2R8Q9NYW2 309 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 ZNF224Q9NZL3 707 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 MED11Q9P086 117 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 MGAT4CQ9UBM8 478 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 UPB1Q9UBR1 384 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 ZNF69Q9UC07 566 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 MRTO4Q9UKD2 239 aaKnown RBP3.98□□□□□ -1.77
ATXN3-241ENST00000556374 RCE1Q9Y256 329 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 SIGLEC7Q9Y286 467 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 ZNF337Q9Y3M9 751 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 OR10H1Q9Y4A9 318 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 SLC22A7Q9Y694 548 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 TEX15Q9BXT5 2789 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 PCNX2A6NKB5 2137 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 PTPRBP23467 1997 aa3.98□□□□□ -1.77
ATXN3-241ENST00000556374 TNRC6BQ9UPQ9 1833 aaKnown RBP3.98□□□□□ -1.77
ATXN3-241ENST00000556374 C2CD3Q4AC94 2353 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 NPIPA5A0A0B4J1W7 369 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 A0A0B4J2E0 115 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 A0A1B0GTQ1 180 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 A0A1B0GWA3 101 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 A0A1B0GX12 115 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 OR6C74A6NCV1 312 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 TRABD2BA6NFA1 517 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 ZSCAN5BA6NJL1 495 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 EFCAB7A8K855 629 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 NPIPA7E9PJI5 369 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 AIPO00170 330 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 PEX12O00623 359 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 CLDN4O14493 209 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 SCAMP1O15126 338 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 ARPC1BO15143 372 aaKnown RBP3.97□□□□□ -1.77
ATXN3-241ENST00000556374 SLC31A1O15431 190 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 OGG1O15527 345 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 AKR7A2O43488 359 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 FGF17O60258 216 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 CDC40O60508 579 aaKnown RBP eCLIP3.97□□□□□ -1.77
ATXN3-241ENST00000556374 DNAJB6O75190 326 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 OR7A10O76100 309 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 NKX2-2O95096 273 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 APBB3O95704 486 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 TGM6O95932 706 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 CSTAP01040 98 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 EGFP01133 1207 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 TNFP01375 233 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 TFP02787 698 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 GYPBP06028 91 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 CELA2AP08217 269 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 GUSBP08236 651 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 HOXC4P09017 264 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-241ENST00000556374 CSF1P09603 554 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 GIPP09681 153 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-241ENST00000556374 GKN3PP0CG01 181 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 NPIPA8P0DM63 369 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 PNMTP11086 282 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 RNH1P13489 461 aaKnown RBP3.97□□□□□ -1.77
ATXN3-241ENST00000556374 ATF1P18846 271 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 POLR2CP19387 275 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-241ENST00000556374 CSRP1P21291 193 aaKnown RBP3.97□□□□□ -1.77
ATXN3-241ENST00000556374 TBXA2RP21731 343 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 HNRNPA2B1P22626 353 aaKnown RBP3.97□□□□□ -1.77
ATXN3-241ENST00000556374 ITPKBP27987 946 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 GDI1P31150 447 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 TNFRSF4P43489 277 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 CCR4P51679 360 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 ART1P52961 327 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 BLVRAP53004 296 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 OR12D2P58182 307 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 PRPS1P60891 318 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 SIRPAP78324 504 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 SSBP2P81877 361 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-241ENST00000556374 E2F1Q01094 437 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 ID2Q02363 134 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 SRSF4Q08170 494 aaKnown RBP3.97□□□□□ -1.77
ATXN3-241ENST00000556374 IL10RAQ13651 578 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 FGFBP1Q14512 234 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 INSL4Q14641 139 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 EXOSC7Q15024 291 aaKnown RBP3.97□□□□□ -1.77
ATXN3-241ENST00000556374 CDONQ4KMG0 1287 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 CLLU1Q5K131 121 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 FAM27D1Q5T7N8 215 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 HES5Q5TA89 166 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 FCRLBQ6BAA4 426 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 SIGIRRQ6IA17 410 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 SLC25A25Q6KCM7 469 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 FIGLAQ6QHK4 219 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 FAM198BQ6UWH4 519 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 TEX261Q6UWH6 196 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 WDR88Q6ZMY6 472 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 DPY19L2P2Q6ZN68 376 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 IDO2Q6ZQW0 420 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 RNF44Q7L0R7 432 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 VN1R4Q7Z5H5 301 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 KCTD20Q7Z5Y7 419 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 PXKQ7Z7A4 578 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 GRAMD2AQ8IUY3 354 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 OR4N5Q8IXE1 308 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 IZUMO1Q8IYV9 350 aa3.97□□□□□ -1.77
ATXN3-241ENST00000556374 ZNF433Q8N7K0 673 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-241ENST00000556374 ZNF676Q8N7Q3 588 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms