RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 NIPBLQ6KC79 2804 aaeCLIP3.44□□□□□ -1.86
PRPF39-209ENST00000556353 HIVEP1P15822 2718 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 PKDREJQ9NTG1 2253 aa3.44□□□□□ -1.86
PRPF39-209ENST00000556353 ILVBLA1L0T0 632 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 FUOMA2VDF0 154 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 OR6C70A6NIJ9 312 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 PRAMEF26H0Y7S4 382 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 PGRMC1O00264 195 aaKnown RBP3.43□□□□□ -1.86
PRPF39-209ENST00000556353 SLC33A1O00400 549 aaPredicted RBP3.43□□□□□ -1.86
PRPF39-209ENST00000556353 KPNA3O00505 521 aaPredicted RBP3.43□□□□□ -1.86
PRPF39-209ENST00000556353 CLDN11O75508 207 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 LDOC1O95751 146 aaPredicted RBP3.43□□□□□ -1.86
PRPF39-209ENST00000556353 MT-ATP6P00846 226 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 PCCBP05166 539 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 RHOCP08134 193 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 FAM58BPP0C7Q3 252 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 MLNP12872 115 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 ADRB3P13945 408 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 GDF1P27539 372 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 HMGCLP35914 325 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 CRATP43155 626 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 KIR3DL2P43630 455 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 NPBWR1P48145 328 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 ARRB1P49407 418 aaPredicted RBP3.43□□□□□ -1.86
PRPF39-209ENST00000556353 CAPZA1P52907 286 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 CDH4P55283 916 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 KRTAP10-1P60331 282 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 ST8SIA6P61647 398 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 GLO1Q04760 184 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 TSTA3Q13630 321 aaPredicted RBP3.43□□□□□ -1.86
PRPF39-209ENST00000556353 EXOC3L4Q17RC7 722 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 SLC25A52Q3SY17 297 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 BCL7AQ4VC05 210 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 ZNF311Q5JNZ3 666 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 KCTD11Q693B1 232 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 SCYL2Q6P3W7 929 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 GUSBP11Q6P575 273 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 Q6ZSR6 202 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 CYP4V2Q6ZWL3 525 aaPredicted RBP3.43□□□□□ -1.86
PRPF39-209ENST00000556353 FRA10AC1Q70Z53 315 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 AMZ2Q86W34 360 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 CLVS1Q8IUQ0 354 aaPredicted RBP3.43□□□□□ -1.86
PRPF39-209ENST00000556353 ATP6V0D2Q8N8Y2 350 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 ZNF557Q8N988 423 aaPredicted RBP3.43□□□□□ -1.86
PRPF39-209ENST00000556353 DCAF4L2Q8NA75 395 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 JOSD2Q8TAC2 188 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 BSCL2Q96G97 398 aaPredicted RBP3.43□□□□□ -1.86
PRPF39-209ENST00000556353 BMFQ96LC9 184 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 CALN1Q9BXU9 219 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 TM6SF2Q9BZW4 377 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 LHX3Q9UBR4 397 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 KCNN3Q9UGI6 736 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 LCMT1Q9UIC8 334 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 DNAJC12Q9UKB3 198 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 STAP1Q9ULZ2 295 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 RNF24Q9Y225 148 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 ENTPD4Q9Y227 616 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 AP3M1Q9Y2T2 418 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 PLLPQ9Y342 182 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 TMED7Q9Y3B3 224 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 ETV7Q9Y603 341 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 AP4B1Q9Y6B7 739 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 HEATR5BQ9P2D3 2071 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 SPG11Q96JI7 2443 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 CACNA1CQ13936 2221 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 C2CD3Q4AC94 2353 aa3.43□□□□□ -1.86
PRPF39-209ENST00000556353 SPTY2D1-AS1A0A0U1RR47 76 aa3.42□□□□□ -1.86
PRPF39-209ENST00000556353 H0YJX3 145 aa3.42□□□□□ -1.86
PRPF39-209ENST00000556353 ZNF701M0R085 212 aaPredicted RBP3.42□□□□□ -1.86
PRPF39-209ENST00000556353 DFNA5O60443 496 aa3.42□□□□□ -1.86
PRPF39-209ENST00000556353 TBX19O60806 448 aa3.42□□□□□ -1.86
PRPF39-209ENST00000556353 CSO75390 466 aaKnown RBP3.42□□□□□ -1.86
PRPF39-209ENST00000556353 WBP4O75554 376 aaKnown RBP3.42□□□□□ -1.86
PRPF39-209ENST00000556353 MBD3O95983 291 aa3.42□□□□□ -1.86
PRPF39-209ENST00000556353 UGT2B4P06133 528 aa3.42□□□□□ -1.86
PRPF39-209ENST00000556353 ANXA5P08758 320 aa3.42□□□□□ -1.86
PRPF39-209ENST00000556353 GSTT2P0CG29 244 aa3.42□□□□□ -1.86
PRPF39-209ENST00000556353 GSTT2BP0CG30 244 aa3.42□□□□□ -1.86
PRPF39-209ENST00000556353 CALCBP10092 127 aa3.42□□□□□ -1.86
PRPF39-209ENST00000556353 UROSP10746 265 aa3.42□□□□□ -1.86
PRPF39-209ENST00000556353 SLC2A3P11169 496 aa3.42□□□□□ -1.86
PRPF39-209ENST00000556353 CPA3P15088 417 aa3.42□□□□□ -1.86
PRPF39-209ENST00000556353 UCHL3P15374 230 aa3.42□□□□□ -1.86
PRPF39-209ENST00000556353 NT5EP21589 574 aa3.42□□□□□ -1.86
PRPF39-209ENST00000556353 PPP2R1BP30154 601 aa3.42□□□□□ -1.86
PRPF39-209ENST00000556353 OR1E1P30953 314 aa3.42□□□□□ -1.86
PRPF39-209ENST00000556353 GPR4P46093 362 aa3.42□□□□□ -1.86
PRPF39-209ENST00000556353 SLC25A1P53007 311 aa3.42□□□□□ -1.86
PRPF39-209ENST00000556353 PFN3P60673 137 aa3.42□□□□□ -1.86
PRPF39-209ENST00000556353 MRPS25P82663 173 aaKnown RBP3.42□□□□□ -1.86
PRPF39-209ENST00000556353 OGDHQ02218 1023 aa3.42□□□□□ -1.86
PRPF39-209ENST00000556353 GNA12Q03113 381 aa3.42□□□□□ -1.86
PRPF39-209ENST00000556353 ILKQ13418 452 aa3.42□□□□□ -1.86
PRPF39-209ENST00000556353 IRF4Q15306 451 aa3.42□□□□□ -1.86
PRPF39-209ENST00000556353 CDKN3Q16667 212 aa3.42□□□□□ -1.86
PRPF39-209ENST00000556353 PPP1R3AQ16821 1122 aa3.42□□□□□ -1.86
PRPF39-209ENST00000556353 DEFB133Q30KQ1 61 aa3.42□□□□□ -1.86
PRPF39-209ENST00000556353 IQCCQ4KMZ1 466 aa3.42□□□□□ -1.86
PRPF39-209ENST00000556353 TEX30Q5JUR7 227 aa3.42□□□□□ -1.86
PRPF39-209ENST00000556353 BRMS1LQ5PSV4 323 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms