RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 IQCMA0A1B0GVH7 501 aa13.12□□□□□ -0.31
ACTN1-217ENST00000556203 VSTM5A8MXK1 200 aa13.12□□□□□ -0.31
ACTN1-217ENST00000556203 H7C417 338 aa13.12□□□□□ -0.31
ACTN1-217ENST00000556203 ARPC3O15145 178 aa13.12□□□□□ -0.31
ACTN1-217ENST00000556203 GPRIN2O60269 458 aa13.12□□□□□ -0.31
ACTN1-217ENST00000556203 KHDRBS3O75525 346 aaKnown RBP13.12□□□□□ -0.31
ACTN1-217ENST00000556203 SCG5P05408 212 aa13.12□□□□□ -0.31
ACTN1-217ENST00000556203 CST2P09228 141 aa13.12□□□□□ -0.31
ACTN1-217ENST00000556203 CCL2P13500 99 aa13.12□□□□□ -0.31
ACTN1-217ENST00000556203 EFNB3Q15768 340 aa13.12□□□□□ -0.31
ACTN1-217ENST00000556203 MICAQ29983 383 aa13.12□□□□□ -0.31
ACTN1-217ENST00000556203 CLEC12BQ2HXU8 276 aa13.12□□□□□ -0.31
ACTN1-217ENST00000556203 CLEC12AQ5QGZ9 265 aa13.12□□□□□ -0.31
ACTN1-217ENST00000556203 JAZF1Q86VZ6 243 aa13.12□□□□□ -0.31
ACTN1-217ENST00000556203 PAQR4Q8N4S7 273 aaPredicted RBP13.12□□□□□ -0.31
ACTN1-217ENST00000556203 CPEB3Q8NE35 698 aaKnown RBP13.12□□□□□ -0.31
ACTN1-217ENST00000556203 OR10G2Q8NGC3 310 aa13.12□□□□□ -0.31
ACTN1-217ENST00000556203 OR52L1Q8NGH7 329 aa13.12□□□□□ -0.31
ACTN1-217ENST00000556203 OR4K13Q8NH42 304 aa13.12□□□□□ -0.31
ACTN1-217ENST00000556203 FOXN4Q96NZ1 517 aa13.12□□□□□ -0.31
ACTN1-217ENST00000556203 C1orf198Q9H425 327 aa13.12□□□□□ -0.31
ACTN1-217ENST00000556203 CDH20Q9HBT6 801 aa13.12□□□□□ -0.31
ACTN1-217ENST00000556203 BARX1Q9HBU1 254 aaPredicted RBP13.12□□□□□ -0.31
ACTN1-217ENST00000556203 PMF1-BGLAPU3KQ54 211 aa13.12□□□□□ -0.31
ACTN1-217ENST00000556203 TCRBV3S1A0A5B6 114 aa13.11□□□□□ -0.31
ACTN1-217ENST00000556203 B9A039 149 aa13.11□□□□□ -0.31
ACTN1-217ENST00000556203 H7C1Q1 480 aa13.11□□□□□ -0.31
ACTN1-217ENST00000556203 GNGT2O14610 69 aa13.11□□□□□ -0.31
ACTN1-217ENST00000556203 PTHP01270 115 aa13.11□□□□□ -0.31
ACTN1-217ENST00000556203 HIST1H1CP16403 213 aaKnown RBP13.11□□□□□ -0.31
ACTN1-217ENST00000556203 HOXB6P17509 224 aaKnown RBP13.11□□□□□ -0.31
ACTN1-217ENST00000556203 APEX1P27695 318 aaKnown RBP13.11□□□□□ -0.31
ACTN1-217ENST00000556203 NOS3P29474 1203 aa13.11□□□□□ -0.31
ACTN1-217ENST00000556203 PSG4Q00888 419 aa13.11□□□□□ -0.31
ACTN1-217ENST00000556203 ENDOGQ14249 297 aaKnown RBP13.11□□□□□ -0.31
ACTN1-217ENST00000556203 RAB35Q15286 201 aa13.11□□□□□ -0.31
ACTN1-217ENST00000556203 TBC1D28Q2M2D7 210 aa13.11□□□□□ -0.31
ACTN1-217ENST00000556203 RPL13AP3Q6NVV1 102 aa13.11□□□□□ -0.31
ACTN1-217ENST00000556203 LEG1Q6P5S2 330 aa13.11□□□□□ -0.31
ACTN1-217ENST00000556203 UGT2A3Q6UWM9 527 aa13.11□□□□□ -0.31
ACTN1-217ENST00000556203 SVOPLQ8N434 492 aa13.11□□□□□ -0.31
ACTN1-217ENST00000556203 OR1J2Q8NGS2 313 aa13.11□□□□□ -0.31
ACTN1-217ENST00000556203 AKR7LQ8NHP1 331 aa13.11□□□□□ -0.31
ACTN1-217ENST00000556203 NMNAT3Q96T66 252 aa13.11□□□□□ -0.31
ACTN1-217ENST00000556203 BDH2Q9BUT1 245 aa13.11□□□□□ -0.31
ACTN1-217ENST00000556203 ZNF416Q9BWM5 594 aa13.11□□□□□ -0.31
ACTN1-217ENST00000556203 OR2H1Q9GZK4 316 aa13.11□□□□□ -0.31
ACTN1-217ENST00000556203 NUAK2Q9H093 628 aa13.11□□□□□ -0.31
ACTN1-217ENST00000556203 PLK3Q9H4B4 646 aa13.11□□□□□ -0.31
ACTN1-217ENST00000556203 EMC7Q9NPA0 242 aa13.11□□□□□ -0.31
ACTN1-217ENST00000556203 COA3Q9Y2R0 106 aaPredicted RBP13.11□□□□□ -0.31
ACTN1-217ENST00000556203 ARID1AO14497 2285 aa13.11□□□□□ -0.31
ACTN1-217ENST00000556203 C12orf71A8MTZ7 269 aa13.1□□□□□ -0.31
ACTN1-217ENST00000556203 SSX4O60224 188 aa13.1□□□□□ -0.31
ACTN1-217ENST00000556203 FKBP6O75344 327 aa13.1□□□□□ -0.31
ACTN1-217ENST00000556203 RENP00797 406 aa13.1□□□□□ -0.31
ACTN1-217ENST00000556203 FAM157BP0CG42 384 aa13.1□□□□□ -0.31
ACTN1-217ENST00000556203 FOSL1P15407 271 aa13.1□□□□□ -0.31
ACTN1-217ENST00000556203 GSTM3P21266 225 aa13.1□□□□□ -0.31
ACTN1-217ENST00000556203 CCNOP22674 350 aa13.1□□□□□ -0.31
ACTN1-217ENST00000556203 APLNRP35414 380 aa13.1□□□□□ -0.31
ACTN1-217ENST00000556203 GLRXP35754 106 aa13.1□□□□□ -0.31
ACTN1-217ENST00000556203 NUDT6P53370 316 aa13.1□□□□□ -0.31
ACTN1-217ENST00000556203 PCBD1P61457 104 aa13.1□□□□□ -0.31
ACTN1-217ENST00000556203 GK3PQ14409 553 aa13.1□□□□□ -0.31
ACTN1-217ENST00000556203 MSMPQ1L6U9 139 aa13.1□□□□□ -0.31
ACTN1-217ENST00000556203 SLC35F1Q5T1Q4 408 aa13.1□□□□□ -0.31
ACTN1-217ENST00000556203 OTPQ5XKR4 325 aa13.1□□□□□ -0.31
ACTN1-217ENST00000556203 RASSF6Q6ZTQ3 369 aa13.1□□□□□ -0.31
ACTN1-217ENST00000556203 GLB1L2Q8IW92 636 aa13.1□□□□□ -0.31
ACTN1-217ENST00000556203 CIARTQ8N365 385 aaPredicted RBP13.1□□□□□ -0.31
ACTN1-217ENST00000556203 MRPL24Q96A35 216 aaKnown RBP13.1□□□□□ -0.31
ACTN1-217ENST00000556203 C18orf12Q96KH6 178 aa13.1□□□□□ -0.31
ACTN1-217ENST00000556203 TSSK2Q96PF2 358 aa13.1□□□□□ -0.31
ACTN1-217ENST00000556203 DGCR6LQ9BY27 220 aa13.1□□□□□ -0.31
ACTN1-217ENST00000556203 PLA2G12AQ9BZM1 189 aa13.1□□□□□ -0.31
ACTN1-217ENST00000556203 WNT5BQ9H1J7 359 aa13.1□□□□□ -0.31
ACTN1-217ENST00000556203 LRMDAQ9H2I8 198 aa13.1□□□□□ -0.31
ACTN1-217ENST00000556203 OR51B6Q9H340 312 aa13.1□□□□□ -0.31
ACTN1-217ENST00000556203 YY1AP1Q9H869 796 aa13.1□□□□□ -0.31
ACTN1-217ENST00000556203 CMAHPQ9Y471 501 aa13.1□□□□□ -0.31
ACTN1-217ENST00000556203 TIMM10BQ9Y5J6 103 aa13.1□□□□□ -0.31
ACTN1-217ENST00000556203 PLCE1Q9P212 2302 aa13.1□□□□□ -0.31
ACTN1-217ENST00000556203 HEATR1Q9H583 2144 aaKnown RBP13.09□□□□□ -0.31
ACTN1-217ENST00000556203 IDH3BO43837 385 aa13.09□□□□□ -0.31
ACTN1-217ENST00000556203 MPZL1O95297 269 aa13.09□□□□□ -0.31
ACTN1-217ENST00000556203 SOX14O95416 240 aa13.09□□□□□ -0.31
ACTN1-217ENST00000556203 SNAP29O95721 258 aa13.09□□□□□ -0.31
ACTN1-217ENST00000556203 IGFBP1P08833 259 aaPredicted RBP13.09□□□□□ -0.31
ACTN1-217ENST00000556203 STOMP27105 288 aa13.09□□□□□ -0.31
ACTN1-217ENST00000556203 CRABP1P29762 137 aa13.09□□□□□ -0.31
ACTN1-217ENST00000556203 CENPAP49450 140 aa13.09□□□□□ -0.31
ACTN1-217ENST00000556203 RPS23P62266 143 aaKnown RBP13.09□□□□□ -0.31
ACTN1-217ENST00000556203 CBX1P83916 185 aa13.09□□□□□ -0.31
ACTN1-217ENST00000556203 TNK1Q13470 666 aa13.09□□□□□ -0.31
ACTN1-217ENST00000556203 DNM1P34Q6PK57 102 aa13.09□□□□□ -0.31
ACTN1-217ENST00000556203 TMEM179BQ7Z7N9 219 aa13.09□□□□□ -0.31
ACTN1-217ENST00000556203 SYT9Q86SS6 491 aa13.09□□□□□ -0.31
ACTN1-217ENST00000556203 OR6V1Q8N148 313 aa13.09□□□□□ -0.31
ACTN1-217ENST00000556203 SDR9C7Q8NEX9 313 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms