RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 ABCC10Q5T3U5 1492 aa3.82□□□□□ -1.8
PSEN1-211ENST00000554995 EEA1Q15075 1411 aa3.82□□□□□ -1.8
PSEN1-211ENST00000554995 TRAV39A0A0B4J263 110 aa3.82□□□□□ -1.8
PSEN1-211ENST00000554995 GJE1A6NN92 205 aa3.82□□□□□ -1.8
PSEN1-211ENST00000554995 LYRM9A8MSI8 78 aa3.82□□□□□ -1.8
PSEN1-211ENST00000554995 SERPINE3A8MV23 424 aa3.82□□□□□ -1.8
PSEN1-211ENST00000554995 HIDE1A8MVS5 230 aa3.82□□□□□ -1.8
PSEN1-211ENST00000554995 H3BNH8 94 aa3.82□□□□□ -1.8
PSEN1-211ENST00000554995 SLC9A3R1O14745 358 aaPredicted RBP3.82□□□□□ -1.8
PSEN1-211ENST00000554995 ZBTB5O15062 677 aa3.82□□□□□ -1.8
PSEN1-211ENST00000554995 EMC8O43402 210 aa3.82□□□□□ -1.8
PSEN1-211ENST00000554995 KLF8O95600 359 aaPredicted RBP3.82□□□□□ -1.8
PSEN1-211ENST00000554995 HPNP05981 417 aa3.82□□□□□ -1.8
PSEN1-211ENST00000554995 CLTAP09496 248 aa3.82□□□□□ -1.8
PSEN1-211ENST00000554995 IGHV3-43DP0DP04 118 aa3.82□□□□□ -1.8
PSEN1-211ENST00000554995 TDGF1P13385 188 aa3.82□□□□□ -1.8
PSEN1-211ENST00000554995 U2AF2P26368 475 aaKnown RBP eCLIP3.82□□□□□ -1.8
PSEN1-211ENST00000554995 GPX4P36969 197 aaPredicted RBP3.82□□□□□ -1.8
PSEN1-211ENST00000554995 TNFSF9P41273 254 aa3.82□□□□□ -1.8
PSEN1-211ENST00000554995 TDGF1P3P51864 188 aa3.82□□□□□ -1.8
PSEN1-211ENST00000554995 NUP107P57740 925 aa3.82□□□□□ -1.8
PSEN1-211ENST00000554995 GGTLC2Q14390 218 aa3.82□□□□□ -1.8
PSEN1-211ENST00000554995 NCF4Q15080 339 aa3.82□□□□□ -1.8
PSEN1-211ENST00000554995 PSMD5Q16401 504 aa3.82□□□□□ -1.8
PSEN1-211ENST00000554995 SPECC1LQ69YQ0 1117 aa3.82□□□□□ -1.8
PSEN1-211ENST00000554995 SPINK14Q6IE38 97 aa3.82□□□□□ -1.8
PSEN1-211ENST00000554995 ACP7Q6ZNF0 438 aa3.82□□□□□ -1.8
PSEN1-211ENST00000554995 CMTM8Q8IZV2 173 aa3.82□□□□□ -1.8
PSEN1-211ENST00000554995 LYG1Q8N1E2 194 aa3.82□□□□□ -1.8
PSEN1-211ENST00000554995 CA5BP1Q8WTZ4 195 aa3.82□□□□□ -1.8
PSEN1-211ENST00000554995 ECSITQ9BQ95 431 aa3.82□□□□□ -1.8
PSEN1-211ENST00000554995 GABARAPL3Q9BY60 117 aa3.82□□□□□ -1.8
PSEN1-211ENST00000554995 PIGUQ9H490 435 aa3.82□□□□□ -1.8
PSEN1-211ENST00000554995 MYOZ2Q9NPC6 264 aa3.82□□□□□ -1.8
PSEN1-211ENST00000554995 ACP6Q9NPH0 428 aa3.82□□□□□ -1.8
PSEN1-211ENST00000554995 SAR1BQ9Y6B6 198 aa3.82□□□□□ -1.8
PSEN1-211ENST00000554995 EIF4G3O43432 1585 aaKnown RBP3.81□□□□□ -1.8
PSEN1-211ENST00000554995 AQRO60306 1485 aaKnown RBP eCLIP3.81□□□□□ -1.8
PSEN1-211ENST00000554995 CEMIPQ8WUJ3 1361 aa3.81□□□□□ -1.8
PSEN1-211ENST00000554995 A0A1W2PRD5 423 aa3.81□□□□□ -1.8
PSEN1-211ENST00000554995 TMEM120BA0PK00 339 aa3.81□□□□□ -1.8
PSEN1-211ENST00000554995 ZNF99A8MXY4 864 aaPredicted RBP3.81□□□□□ -1.8
PSEN1-211ENST00000554995 H0YHG0 523 aa3.81□□□□□ -1.8
PSEN1-211ENST00000554995 SMKR1H3BMG3 65 aa3.81□□□□□ -1.8
PSEN1-211ENST00000554995 ICOSLGO75144 302 aa3.81□□□□□ -1.8
PSEN1-211ENST00000554995 FKBP6O75344 327 aa3.81□□□□□ -1.8
PSEN1-211ENST00000554995 SRP72O76094 671 aaKnown RBP3.81□□□□□ -1.8
PSEN1-211ENST00000554995 LY6G6DO95868 133 aa3.81□□□□□ -1.8
PSEN1-211ENST00000554995 CSTAP01040 98 aa3.81□□□□□ -1.8
PSEN1-211ENST00000554995 AK4P27144 223 aaPredicted RBP3.81□□□□□ -1.8
PSEN1-211ENST00000554995 HRH1P35367 487 aa3.81□□□□□ -1.8
PSEN1-211ENST00000554995 NBL1P41271 181 aa3.81□□□□□ -1.8
PSEN1-211ENST00000554995 RPS15AP62244 130 aaKnown RBP3.81□□□□□ -1.8
PSEN1-211ENST00000554995 MXD1Q05195 221 aa3.81□□□□□ -1.8
PSEN1-211ENST00000554995 ZNF726P1Q15940 193 aa3.81□□□□□ -1.8
PSEN1-211ENST00000554995 IL17AQ16552 155 aa3.81□□□□□ -1.8
PSEN1-211ENST00000554995 H3F3CQ6NXT2 135 aa3.81□□□□□ -1.8
PSEN1-211ENST00000554995 LINC00173Q6ZV60 143 aa3.81□□□□□ -1.8
PSEN1-211ENST00000554995 TMEM179Q6ZVK1 233 aa3.81□□□□□ -1.8
PSEN1-211ENST00000554995 FAM122BQ7Z309 247 aa3.81□□□□□ -1.8
PSEN1-211ENST00000554995 TMEM150AQ86TG1 271 aa3.81□□□□□ -1.8
PSEN1-211ENST00000554995 OR2L5Q8NG80 312 aa3.81□□□□□ -1.8
PSEN1-211ENST00000554995 OR2A1Q8NGT9 310 aa3.81□□□□□ -1.8
PSEN1-211ENST00000554995 LINC01006Q8NI28 216 aa3.81□□□□□ -1.8
PSEN1-211ENST00000554995 TOP1MTQ969P6 601 aa3.81□□□□□ -1.8
PSEN1-211ENST00000554995 EEF1AKMT3Q96AZ1 226 aa3.81□□□□□ -1.8
PSEN1-211ENST00000554995 LRRC58Q96CX6 371 aa3.81□□□□□ -1.8
PSEN1-211ENST00000554995 AURKBQ96GD4 344 aaPredicted RBP3.81□□□□□ -1.8
PSEN1-211ENST00000554995 YTHDF1Q9BYJ9 559 aaKnown RBP3.81□□□□□ -1.8
PSEN1-211ENST00000554995 SLCO1B3Q9NPD5 702 aa3.81□□□□□ -1.8
PSEN1-211ENST00000554995 IL17CQ9P0M4 197 aa3.81□□□□□ -1.8
PSEN1-211ENST00000554995 RCL1Q9Y2P8 373 aaKnown RBP3.81□□□□□ -1.8
PSEN1-211ENST00000554995 F11RQ9Y624 299 aaKnown RBP3.81□□□□□ -1.8
PSEN1-211ENST00000554995 LRRK1Q38SD2 2015 aa3.81□□□□□ -1.8
PSEN1-211ENST00000554995 RLFQ13129 1914 aa3.81□□□□□ -1.8
PSEN1-211ENST00000554995 BIVM-ERCC5R4GMW8 1640 aa3.81□□□□□ -1.8
PSEN1-211ENST00000554995 IGLV3-10A0A075B6K4 115 aa3.8□□□□□ -1.8
PSEN1-211ENST00000554995 A0A1W2PPV4 95 aa3.8□□□□□ -1.8
PSEN1-211ENST00000554995 HAT1O14929 419 aa3.8□□□□□ -1.8
PSEN1-211ENST00000554995 NUPL2O15504 423 aaKnown RBP3.8□□□□□ -1.8
PSEN1-211ENST00000554995 SNAI1O95863 264 aaPredicted RBP3.8□□□□□ -1.8
PSEN1-211ENST00000554995 TGM6O95932 706 aa3.8□□□□□ -1.8
PSEN1-211ENST00000554995 MBP02144 154 aa3.8□□□□□ -1.8
PSEN1-211ENST00000554995 CT45A6P0DMU7 189 aa3.8□□□□□ -1.8
PSEN1-211ENST00000554995 CT45A5P0DMU8 189 aa3.8□□□□□ -1.8
PSEN1-211ENST00000554995 CT45A7P0DMV0 189 aa3.8□□□□□ -1.8
PSEN1-211ENST00000554995 CD1EP15812 388 aa3.8□□□□□ -1.8
PSEN1-211ENST00000554995 CNR1P21554 472 aa3.8□□□□□ -1.8
PSEN1-211ENST00000554995 NUP62P37198 522 aaPredicted RBP3.8□□□□□ -1.8
PSEN1-211ENST00000554995 CTRLP40313 264 aa3.8□□□□□ -1.8
PSEN1-211ENST00000554995 SLC26A3P40879 764 aa3.8□□□□□ -1.8
PSEN1-211ENST00000554995 ETV1P50549 477 aa3.8□□□□□ -1.8
PSEN1-211ENST00000554995 NCBP2P52298 156 aaKnown RBP eCLIP3.8□□□□□ -1.8
PSEN1-211ENST00000554995 TMED1Q13445 227 aa3.8□□□□□ -1.8
PSEN1-211ENST00000554995 OR7A5Q15622 319 aa3.8□□□□□ -1.8
PSEN1-211ENST00000554995 GUCA2BQ16661 112 aa3.8□□□□□ -1.8
PSEN1-211ENST00000554995 RFX4Q33E94 735 aa3.8□□□□□ -1.8
PSEN1-211ENST00000554995 CT45A1Q5HYN5 189 aa3.8□□□□□ -1.8
PSEN1-211ENST00000554995 OTPQ5XKR4 325 aa3.8□□□□□ -1.8
PSEN1-211ENST00000554995 FRMPD2BQ6IN97 320 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms