RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 TRBV5-4A0A0C4DH59 114 aa12.79□□□□□ -0.36
VTI1B-204ENST00000554659 OR6C76A6NM76 312 aa12.79□□□□□ -0.36
VTI1B-204ENST00000554659 PHF1O43189 567 aaPredicted RBP12.79□□□□□ -0.36
VTI1B-204ENST00000554659 TGFBR1P36897 503 aa12.79□□□□□ -0.36
VTI1B-204ENST00000554659 NPY4RP50391 375 aa12.79□□□□□ -0.36
VTI1B-204ENST00000554659 TRMT12Q53H54 448 aaKnown RBP12.79□□□□□ -0.36
VTI1B-204ENST00000554659 TCTN3Q6NUS6 607 aa12.79□□□□□ -0.36
VTI1B-204ENST00000554659 ANGPTL5Q86XS5 388 aa12.79□□□□□ -0.36
VTI1B-204ENST00000554659 MAP3K3Q99759 626 aa12.79□□□□□ -0.36
VTI1B-204ENST00000554659 ARID1BQ8NFD5 2236 aaPredicted RBP12.79□□□□□ -0.36
VTI1B-204ENST00000554659 HOXC11O43248 304 aaPredicted RBP12.79□□□□□ -0.36
VTI1B-204ENST00000554659 IGHEP01854 428 aa12.79□□□□□ -0.36
VTI1B-204ENST00000554659 GABRB1P18505 474 aa12.79□□□□□ -0.36
VTI1B-204ENST00000554659 CHRNB4P30926 498 aa12.79□□□□□ -0.36
VTI1B-204ENST00000554659 SSR4P51571 173 aa12.79□□□□□ -0.36
VTI1B-204ENST00000554659 DCDP81605 110 aaKnown RBP12.79□□□□□ -0.36
VTI1B-204ENST00000554659 H1FNTQ75WM6 255 aaPredicted RBP12.79□□□□□ -0.36
VTI1B-204ENST00000554659 NAXDQ8IW45 347 aa12.79□□□□□ -0.36
VTI1B-204ENST00000554659 OR4N2Q8NGD1 307 aa12.79□□□□□ -0.36
VTI1B-204ENST00000554659 SLC6A17Q9H1V8 727 aa12.79□□□□□ -0.36
VTI1B-204ENST00000554659 GNG12Q9UBI6 72 aa12.79□□□□□ -0.36
VTI1B-204ENST00000554659 NXT1Q9UKK6 140 aaKnown RBP12.79□□□□□ -0.36
VTI1B-204ENST00000554659 AKAP11Q9UKA4 1901 aa12.79□□□□□ -0.36
VTI1B-204ENST00000554659 TMPRSS11DO60235 418 aa12.79□□□□□ -0.36
VTI1B-204ENST00000554659 B4GALT3O60512 393 aa12.79□□□□□ -0.36
VTI1B-204ENST00000554659 DIO1P49895 249 aa12.79□□□□□ -0.36
VTI1B-204ENST00000554659 HCCSP53701 268 aa12.79□□□□□ -0.36
VTI1B-204ENST00000554659 MARCH3Q86UD3 253 aa12.79□□□□□ -0.36
VTI1B-204ENST00000554659 SUMF1Q8NBK3 374 aa12.79□□□□□ -0.36
VTI1B-204ENST00000554659 OR8U1Q8NH10 309 aa12.79□□□□□ -0.36
VTI1B-204ENST00000554659 SEMA4CQ9C0C4 833 aa12.79□□□□□ -0.36
VTI1B-204ENST00000554659 FGF20Q9NP95 211 aaPredicted RBP12.79□□□□□ -0.36
VTI1B-204ENST00000554659 KPTNQ9Y664 436 aa12.79□□□□□ -0.36
VTI1B-204ENST00000554659 TNFRSF10CO14798 259 aa12.78□□□□□ -0.36
VTI1B-204ENST00000554659 TMEM11P17152 192 aa12.78□□□□□ -0.36
VTI1B-204ENST00000554659 IRS1P35568 1242 aa12.78□□□□□ -0.36
VTI1B-204ENST00000554659 FABP5Q01469 135 aa12.78□□□□□ -0.36
VTI1B-204ENST00000554659 TPBGQ13641 420 aa12.78□□□□□ -0.36
VTI1B-204ENST00000554659 CAMKMTQ7Z624 323 aa12.78□□□□□ -0.36
VTI1B-204ENST00000554659 RHBDD1Q8TEB9 315 aa12.78□□□□□ -0.36
VTI1B-204ENST00000554659 ZNF385DQ9H6B1 395 aa12.78□□□□□ -0.36
VTI1B-204ENST00000554659 CGGBP1Q9UFW8 167 aaPredicted RBP12.78□□□□□ -0.36
VTI1B-204ENST00000554659 PCDHB10Q9UN67 800 aa12.78□□□□□ -0.36
VTI1B-204ENST00000554659 TUSC2O75896 110 aa12.78□□□□□ -0.36
VTI1B-204ENST00000554659 SPI1P17947 270 aa12.78□□□□□ -0.36
VTI1B-204ENST00000554659 CXCL12P48061 93 aa12.78□□□□□ -0.36
VTI1B-204ENST00000554659 ZFPM2Q8WW38 1151 aa12.78□□□□□ -0.36
VTI1B-204ENST00000554659 ZNF775Q96BV0 537 aaPredicted RBP12.78□□□□□ -0.36
VTI1B-204ENST00000554659 WWTR1Q9GZV5 400 aa12.78□□□□□ -0.36
VTI1B-204ENST00000554659 PARP12Q9H0J9 701 aaKnown RBP12.78□□□□□ -0.36
VTI1B-204ENST00000554659 MN1Q10571 1320 aaPredicted RBP12.78□□□□□ -0.36
VTI1B-204ENST00000554659 ZC3H12DA2A288 527 aaKnown RBP12.78□□□□□ -0.36
VTI1B-204ENST00000554659 CPEB2Q7Z5Q1 589 aaKnown RBP12.78□□□□□ -0.36
VTI1B-204ENST00000554659 KCNRGQ8N5I3 272 aa12.78□□□□□ -0.36
VTI1B-204ENST00000554659 RBMXL3Q8N7X1 1067 aaKnown RBP12.78□□□□□ -0.36
VTI1B-204ENST00000554659 GJC3Q8NFK1 279 aa12.78□□□□□ -0.36
VTI1B-204ENST00000554659 SFT2D1Q8WV19 159 aa12.78□□□□□ -0.36
VTI1B-204ENST00000554659 UBL7Q96S82 380 aaPredicted RBP12.78□□□□□ -0.36
VTI1B-204ENST00000554659 NKX6-2Q9C056 277 aaPredicted RBP12.78□□□□□ -0.36
VTI1B-204ENST00000554659 SLC25A32Q9H2D1 315 aa12.78□□□□□ -0.36
VTI1B-204ENST00000554659 TAF9BQ9HBM6 251 aa12.78□□□□□ -0.36
VTI1B-204ENST00000554659 UFSP2Q9NUQ7 469 aa12.78□□□□□ -0.36
VTI1B-204ENST00000554659 LHX6Q9UPM6 363 aa12.78□□□□□ -0.36
VTI1B-204ENST00000554659 HS3ST3A1Q9Y663 406 aa12.78□□□□□ -0.36
VTI1B-204ENST00000554659 LRP5LA4QPB2 252 aa12.78□□□□□ -0.36
VTI1B-204ENST00000554659 HSPB2A8KAH6 182 aa12.78□□□□□ -0.36
VTI1B-204ENST00000554659 CYTIPO60759 359 aa12.78□□□□□ -0.36
VTI1B-204ENST00000554659 PSMB3P49720 205 aa12.78□□□□□ -0.36
VTI1B-204ENST00000554659 VEGFBP49765 207 aa12.78□□□□□ -0.36
VTI1B-204ENST00000554659 DOC2BQ14184 412 aa12.78□□□□□ -0.36
VTI1B-204ENST00000554659 HSPB2Q16082 182 aa12.78□□□□□ -0.36
VTI1B-204ENST00000554659 COA3Q9Y2R0 106 aaPredicted RBP12.78□□□□□ -0.36
VTI1B-204ENST00000554659 LAMB1P07942 1786 aa12.77□□□□□ -0.36
VTI1B-204ENST00000554659 PRSS44E7EML9 344 aa12.77□□□□□ -0.36
VTI1B-204ENST00000554659 K7ESM1 405 aa12.77□□□□□ -0.36
VTI1B-204ENST00000554659 TAAR5O14804 337 aa12.77□□□□□ -0.36
VTI1B-204ENST00000554659 DFFBO76075 338 aa12.77□□□□□ -0.36
VTI1B-204ENST00000554659 NXPH3O95157 252 aa12.77□□□□□ -0.36
VTI1B-204ENST00000554659 SLC2A10O95528 541 aa12.77□□□□□ -0.36
VTI1B-204ENST00000554659 HPNP05981 417 aa12.77□□□□□ -0.36
VTI1B-204ENST00000554659 RPA2P15927 270 aa12.77□□□□□ -0.36
VTI1B-204ENST00000554659 HIST1H1CP16403 213 aaKnown RBP12.77□□□□□ -0.36
VTI1B-204ENST00000554659 HSF5Q4G112 596 aaPredicted RBP12.77□□□□□ -0.36
VTI1B-204ENST00000554659 PIGQQ9BRB3 760 aa12.77□□□□□ -0.36
VTI1B-204ENST00000554659 VPS25Q9BRG1 176 aa12.77□□□□□ -0.36
VTI1B-204ENST00000554659 LRP5O75197 1615 aa12.77□□□□□ -0.36
VTI1B-204ENST00000554659 NFYBP25208 207 aa12.77□□□□□ -0.36
VTI1B-204ENST00000554659 SDHAP31040 664 aa12.77□□□□□ -0.36
VTI1B-204ENST00000554659 PGFP49763 221 aa12.77□□□□□ -0.36
VTI1B-204ENST00000554659 PRAMEF20Q5VT98 475 aa12.77□□□□□ -0.36
VTI1B-204ENST00000554659 DOK3Q7L591 496 aa12.77□□□□□ -0.36
VTI1B-204ENST00000554659 CNEP1R1Q8N9A8 125 aa12.77□□□□□ -0.36
VTI1B-204ENST00000554659 OR4A16Q8NH70 328 aa12.77□□□□□ -0.36
VTI1B-204ENST00000554659 REEP6Q96HR9 211 aa12.77□□□□□ -0.36
VTI1B-204ENST00000554659 ANKRD36CQ5JPF3 1778 aa12.77□□□□□ -0.37
VTI1B-204ENST00000554659 H7C1Q1 480 aa12.77□□□□□ -0.37
VTI1B-204ENST00000554659 BCAT2O15382 392 aaPredicted RBP12.77□□□□□ -0.37
VTI1B-204ENST00000554659 PRAMEF4O60810 478 aa12.77□□□□□ -0.37
VTI1B-204ENST00000554659 CD1EP15812 388 aa12.77□□□□□ -0.37
VTI1B-204ENST00000554659 RAB11AP62491 216 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms