RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 ZNF665Q9H7R5 613 aa16■□□□□ 0.15
CPSF2-203ENST00000554290 SAR1AQ9NR31 198 aa16■□□□□ 0.15
CPSF2-203ENST00000554290 PLSCR5A0PG75 271 aa15.99■□□□□ 0.15
CPSF2-203ENST00000554290 FAM220BPB1ANY3 271 aa15.99■□□□□ 0.15
CPSF2-203ENST00000554290 CLDN25C9JDP6 229 aa15.99■□□□□ 0.15
CPSF2-203ENST00000554290 IFI30P13284 250 aa15.99■□□□□ 0.15
CPSF2-203ENST00000554290 ZNF81P51508 661 aa15.99■□□□□ 0.15
CPSF2-203ENST00000554290 PCBD1P61457 104 aa15.99■□□□□ 0.15
CPSF2-203ENST00000554290 SELENOWP63302 87 aa15.99■□□□□ 0.15
CPSF2-203ENST00000554290 GLO1Q04760 184 aa15.99■□□□□ 0.15
CPSF2-203ENST00000554290 TOP3AQ13472 1001 aaPredicted RBP15.99■□□□□ 0.15
CPSF2-203ENST00000554290 AVPI1Q5T686 147 aa15.99■□□□□ 0.15
CPSF2-203ENST00000554290 FAM205BPQ63HN1 556 aa15.99■□□□□ 0.15
CPSF2-203ENST00000554290 USP51Q70EK9 711 aa15.99■□□□□ 0.15
CPSF2-203ENST00000554290 MICU2Q8IYU8 434 aa15.99■□□□□ 0.15
CPSF2-203ENST00000554290 RAB39BQ96DA2 213 aa15.99■□□□□ 0.15
CPSF2-203ENST00000554290 PRRC1Q96M27 445 aa15.99■□□□□ 0.15
CPSF2-203ENST00000554290 SAP30LQ9HAJ7 183 aa15.99■□□□□ 0.15
CPSF2-203ENST00000554290 TIMM10BQ9Y5J6 103 aa15.99■□□□□ 0.15
CPSF2-203ENST00000554290 IGKV1D-43A0A0B4J1Z2 117 aa15.98■□□□□ 0.15
CPSF2-203ENST00000554290 ELOVL7A1L3X0 281 aa15.98■□□□□ 0.15
CPSF2-203ENST00000554290 A6NIZ1 184 aa15.98■□□□□ 0.15
CPSF2-203ENST00000554290 PIP5K1CO60331 668 aa15.98■□□□□ 0.15
CPSF2-203ENST00000554290 PNPP00491 289 aa15.98■□□□□ 0.15
CPSF2-203ENST00000554290 CTXN1P60606 82 aa15.98■□□□□ 0.15
CPSF2-203ENST00000554290 RAP1BP61224 184 aa15.98■□□□□ 0.15
CPSF2-203ENST00000554290 RAP1AP62834 184 aa15.98■□□□□ 0.15
CPSF2-203ENST00000554290 ERVK-25P63136 954 aa15.98■□□□□ 0.15
CPSF2-203ENST00000554290 PSG4Q00888 419 aa15.98■□□□□ 0.15
CPSF2-203ENST00000554290 TSTQ16762 297 aaKnown RBP15.98■□□□□ 0.15
CPSF2-203ENST00000554290 ANKDD1AQ495B1 522 aa15.98■□□□□ 0.15
CPSF2-203ENST00000554290 FAM209AQ5JX71 171 aa15.98■□□□□ 0.15
CPSF2-203ENST00000554290 AKR7LQ8NHP1 331 aa15.98■□□□□ 0.15
CPSF2-203ENST00000554290 ZNF418Q8TF45 676 aaPredicted RBP15.98■□□□□ 0.15
CPSF2-203ENST00000554290 RAB1CQ92928 201 aa15.98■□□□□ 0.15
CPSF2-203ENST00000554290 ELMOD3Q96FG2 381 aa15.98■□□□□ 0.15
CPSF2-203ENST00000554290 MARS2Q96GW9 593 aaKnown RBP15.98■□□□□ 0.15
CPSF2-203ENST00000554290 CYSLTR2Q9NS75 346 aa15.98■□□□□ 0.15
CPSF2-203ENST00000554290 FGFR1OP2Q9NVK5 253 aa15.98■□□□□ 0.15
CPSF2-203ENST00000554290 A4GNTQ9UNA3 340 aa15.98■□□□□ 0.15
CPSF2-203ENST00000554290 AP3M1Q9Y2T2 418 aa15.98■□□□□ 0.15
CPSF2-203ENST00000554290 LOC100509620A0A075B734 347 aa15.97■□□□□ 0.15
CPSF2-203ENST00000554290 IGHMP01871 453 aa15.97■□□□□ 0.15
CPSF2-203ENST00000554290 CST2P09228 141 aa15.97■□□□□ 0.15
CPSF2-203ENST00000554290 H2AFXP16104 143 aaPredicted RBP15.97■□□□□ 0.15
CPSF2-203ENST00000554290 LAP3P28838 519 aa15.97■□□□□ 0.15
CPSF2-203ENST00000554290 LIPAP38571 399 aa15.97■□□□□ 0.15
CPSF2-203ENST00000554290 WNT5AP41221 380 aa15.97■□□□□ 0.15
CPSF2-203ENST00000554290 SPATA46Q5T0L3 261 aa15.97■□□□□ 0.15
CPSF2-203ENST00000554290 MBNL2Q5VZF2 373 aaKnown RBP15.97■□□□□ 0.15
CPSF2-203ENST00000554290 ARL9Q6T311 187 aa15.97■□□□□ 0.15
CPSF2-203ENST00000554290 OAFQ86UD1 273 aa15.97■□□□□ 0.15
CPSF2-203ENST00000554290 MEX3DQ86XN8 651 aaKnown RBP15.97■□□□□ 0.15
CPSF2-203ENST00000554290 ZNF101Q8IZC7 436 aa15.97■□□□□ 0.15
CPSF2-203ENST00000554290 ZFAND2BQ8WV99 257 aa15.97■□□□□ 0.15
CPSF2-203ENST00000554290 FNDC11Q9BVV2 318 aa15.97■□□□□ 0.15
CPSF2-203ENST00000554290 OR2H1Q9GZK4 316 aa15.97■□□□□ 0.15
CPSF2-203ENST00000554290 EGLN1Q9GZT9 426 aa15.97■□□□□ 0.15
CPSF2-203ENST00000554290 CAPN7Q9Y6W3 813 aa15.97■□□□□ 0.15
CPSF2-203ENST00000554290 H3BSA7 217 aa15.96■□□□□ 0.15
CPSF2-203ENST00000554290 SPRY3O43610 288 aa15.96■□□□□ 0.15
CPSF2-203ENST00000554290 MPZL1O95297 269 aa15.96■□□□□ 0.15
CPSF2-203ENST00000554290 IFNW1P05000 195 aa15.96■□□□□ 0.15
CPSF2-203ENST00000554290 MPV17P39210 176 aa15.96■□□□□ 0.15
CPSF2-203ENST00000554290 MMP15P51511 669 aa15.96■□□□□ 0.15
CPSF2-203ENST00000554290 ARHGDIAP52565 204 aa15.96■□□□□ 0.15
CPSF2-203ENST00000554290 SF3A3Q12874 501 aaKnown RBP eCLIP15.96■□□□□ 0.15
CPSF2-203ENST00000554290 TRAM2Q15035 370 aa15.96■□□□□ 0.15
CPSF2-203ENST00000554290 OFCC1Q8IZS5 231 aa15.96■□□□□ 0.15
CPSF2-203ENST00000554290 OR51A7Q8NH64 312 aa15.96■□□□□ 0.15
CPSF2-203ENST00000554290 ABHD4Q8TB40 342 aa15.96■□□□□ 0.15
CPSF2-203ENST00000554290 SLC25A40Q8TBP6 338 aa15.96■□□□□ 0.15
CPSF2-203ENST00000554290 KLF14Q8TD94 323 aaPredicted RBP15.96■□□□□ 0.15
CPSF2-203ENST00000554290 IPCEF1Q8WWN9 437 aaPredicted RBP15.96■□□□□ 0.15
CPSF2-203ENST00000554290 CCL17Q92583 94 aa15.96■□□□□ 0.15
CPSF2-203ENST00000554290 GTF3AQ92664 365 aaKnown RBP15.96■□□□□ 0.15
CPSF2-203ENST00000554290 OR2J1Q9GZK6 312 aa15.96■□□□□ 0.15
CPSF2-203ENST00000554290 WNT5BQ9H1J7 359 aa15.96■□□□□ 0.15
CPSF2-203ENST00000554290 ELOVL3Q9HB03 270 aa15.96■□□□□ 0.15
CPSF2-203ENST00000554290 CGGBP1Q9UFW8 167 aaPredicted RBP15.96■□□□□ 0.15
CPSF2-203ENST00000554290 WIPI2Q9Y4P8 454 aa15.96■□□□□ 0.15
CPSF2-203ENST00000554290 A0A0G2JMP0 313 aa15.95■□□□□ 0.14
CPSF2-203ENST00000554290 A0A0X1KG70 313 aa15.95■□□□□ 0.14
CPSF2-203ENST00000554290 A0A1W2PPL8 197 aa15.95■□□□□ 0.14
CPSF2-203ENST00000554290 C12orf71A8MTZ7 269 aa15.95■□□□□ 0.14
CPSF2-203ENST00000554290 SLC22A2O15244 555 aa15.95■□□□□ 0.14
CPSF2-203ENST00000554290 PLPP2O43688 288 aa15.95■□□□□ 0.14
CPSF2-203ENST00000554290 VENTXO95231 258 aa15.95■□□□□ 0.14
CPSF2-203ENST00000554290 IGHV1-46P01743 117 aa15.95■□□□□ 0.14
CPSF2-203ENST00000554290 MAKP20794 623 aa15.95■□□□□ 0.14
CPSF2-203ENST00000554290 YAP1P46937 504 aaKnown RBP15.95■□□□□ 0.14
CPSF2-203ENST00000554290 PPP1CBP62140 327 aa15.95■□□□□ 0.14
CPSF2-203ENST00000554290 PRKCDQ05655 676 aa15.95■□□□□ 0.14
CPSF2-203ENST00000554290 SLC3A1Q07837 685 aa15.95■□□□□ 0.14
CPSF2-203ENST00000554290 ZMAT1Q5H9K5 638 aa15.95■□□□□ 0.14
CPSF2-203ENST00000554290 C12orf54Q6X4T0 127 aa15.95■□□□□ 0.14
CPSF2-203ENST00000554290 THSD4Q6ZMP0 1018 aa15.95■□□□□ 0.14
CPSF2-203ENST00000554290 FOXL2NBQ6ZUU3 175 aa15.95■□□□□ 0.14
CPSF2-203ENST00000554290 ARPINQ7Z6K5 226 aa15.95■□□□□ 0.14
CPSF2-203ENST00000554290 IGFN1Q86VF2 1251 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms