RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 ZNF524Q96C55 264 aa11.09□□□□□ -0.63
SHMT2-207ENST00000553837 ZMYND19Q96E35 227 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-207ENST00000553837 OR14A2Q96R54 314 aa11.09□□□□□ -0.63
SHMT2-207ENST00000553837 TRIM2Q9C040 744 aa11.09□□□□□ -0.63
SHMT2-207ENST00000553837 ALX4Q9H161 411 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-207ENST00000553837 TMEM185BQ9H7F4 350 aa11.09□□□□□ -0.63
SHMT2-207ENST00000553837 PRMT8Q9NR22 394 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-207ENST00000553837 PRTFDC1Q9NRG1 225 aa11.09□□□□□ -0.63
SHMT2-207ENST00000553837 ZFP57Q9NU63 452 aa11.09□□□□□ -0.63
SHMT2-207ENST00000553837 A0A1W2PPC1 479 aa11.09□□□□□ -0.63
SHMT2-207ENST00000553837 OR6C68A6NDL8 312 aa11.09□□□□□ -0.63
SHMT2-207ENST00000553837 C4orf47A7E2U8 309 aa11.09□□□□□ -0.63
SHMT2-207ENST00000553837 OIP5O43482 229 aa11.09□□□□□ -0.63
SHMT2-207ENST00000553837 CRYBA1P05813 215 aa11.09□□□□□ -0.63
SHMT2-207ENST00000553837 CALCBP10092 127 aa11.09□□□□□ -0.63
SHMT2-207ENST00000553837 GPX4P36969 197 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-207ENST00000553837 RBM34P42696 430 aaKnown RBP11.09□□□□□ -0.63
SHMT2-207ENST00000553837 RPS11P62280 158 aaKnown RBP eCLIP11.09□□□□□ -0.63
SHMT2-207ENST00000553837 DEFA6Q01524 100 aa11.09□□□□□ -0.63
SHMT2-207ENST00000553837 ZNHIT3Q15649 155 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-207ENST00000553837 GUCA2BQ16661 112 aa11.09□□□□□ -0.63
SHMT2-207ENST00000553837 TP53I3Q53FA7 332 aa11.09□□□□□ -0.63
SHMT2-207ENST00000553837 RPL22L1Q6P5R6 122 aaKnown RBP11.09□□□□□ -0.63
SHMT2-207ENST00000553837 OR2W3Q7Z3T1 314 aa11.09□□□□□ -0.63
SHMT2-207ENST00000553837 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-207ENST00000553837 GLB1L2Q8IW92 636 aa11.09□□□□□ -0.63
SHMT2-207ENST00000553837 ZNF321PQ8N8H1 164 aa11.09□□□□□ -0.63
SHMT2-207ENST00000553837 ZNF615Q8N8J6 731 aa11.09□□□□□ -0.63
SHMT2-207ENST00000553837 ZPLD1Q8TCW7 415 aa11.09□□□□□ -0.63
SHMT2-207ENST00000553837 HAVCR1Q96D42 359 aa11.09□□□□□ -0.63
SHMT2-207ENST00000553837 KLHDC3Q9BQ90 382 aa11.09□□□□□ -0.63
SHMT2-207ENST00000553837 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-207ENST00000553837 TAS2R8Q9NYW2 309 aa11.09□□□□□ -0.63
SHMT2-207ENST00000553837 ZNF629Q9UEG4 869 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-207ENST00000553837 SERTAD3Q9UJW9 196 aa11.09□□□□□ -0.63
SHMT2-207ENST00000553837 TRBV2A0A0J9YWF9 115 aa11.08□□□□□ -0.64
SHMT2-207ENST00000553837 UBE2CO00762 179 aa11.08□□□□□ -0.64
SHMT2-207ENST00000553837 PHYHO14832 338 aa11.08□□□□□ -0.64
SHMT2-207ENST00000553837 OR2F2O95006 317 aa11.08□□□□□ -0.64
SHMT2-207ENST00000553837 GUSBP08236 651 aa11.08□□□□□ -0.64
SHMT2-207ENST00000553837 CDK2P24941 298 aa11.08□□□□□ -0.64
SHMT2-207ENST00000553837 SLC6A6P31641 620 aa11.08□□□□□ -0.64
SHMT2-207ENST00000553837 UBE2MP61081 183 aaKnown RBP11.08□□□□□ -0.64
SHMT2-207ENST00000553837 ACTA2P62736 377 aa11.08□□□□□ -0.64
SHMT2-207ENST00000553837 PPIAP62937 165 aaKnown RBP11.08□□□□□ -0.64
SHMT2-207ENST00000553837 ACTG2P63267 376 aa11.08□□□□□ -0.64
SHMT2-207ENST00000553837 OR2F1Q13607 317 aa11.08□□□□□ -0.64
SHMT2-207ENST00000553837 ZNF345Q14585 488 aa11.08□□□□□ -0.64
SHMT2-207ENST00000553837 KCNAB1Q14722 419 aa11.08□□□□□ -0.64
SHMT2-207ENST00000553837 PON3Q15166 354 aa11.08□□□□□ -0.64
SHMT2-207ENST00000553837 C10orf91Q5T1B1 145 aa11.08□□□□□ -0.64
SHMT2-207ENST00000553837 PWWP2BQ6NUJ5 590 aa11.08□□□□□ -0.64
SHMT2-207ENST00000553837 ULK3Q6PHR2 472 aa11.08□□□□□ -0.64
SHMT2-207ENST00000553837 DNM1P46Q6ZS02 220 aa11.08□□□□□ -0.64
SHMT2-207ENST00000553837 FAM122BQ7Z309 247 aa11.08□□□□□ -0.64
SHMT2-207ENST00000553837 SYS1Q8N2H4 156 aa11.08□□□□□ -0.64
SHMT2-207ENST00000553837 ZNF433Q8N7K0 673 aaPredicted RBP11.08□□□□□ -0.64
SHMT2-207ENST00000553837 GATSQ8NAP1 163 aa11.08□□□□□ -0.64
SHMT2-207ENST00000553837 OR6N1Q8NGY5 312 aa11.08□□□□□ -0.64
SHMT2-207ENST00000553837 C2CD4CQ8TF44 421 aa11.08□□□□□ -0.64
SHMT2-207ENST00000553837 CPNE4Q96A23 557 aaPredicted RBP11.08□□□□□ -0.64
SHMT2-207ENST00000553837 DGAT2Q96PD7 388 aa11.08□□□□□ -0.64
SHMT2-207ENST00000553837 CRB3Q9BUF7 120 aa11.08□□□□□ -0.64
SHMT2-207ENST00000553837 FAM117AQ9C073 453 aa11.08□□□□□ -0.64
SHMT2-207ENST00000553837 OR10A5Q9H207 317 aa11.08□□□□□ -0.64
SHMT2-207ENST00000553837 NOX4Q9NPH5 578 aa11.08□□□□□ -0.64
SHMT2-207ENST00000553837 CARHSP1Q9Y2V2 147 aaKnown RBP11.08□□□□□ -0.64
SHMT2-207ENST00000553837 IER3IP1Q9Y5U9 82 aa11.08□□□□□ -0.64
SHMT2-207ENST00000553837 V9GY05 133 aa11.08□□□□□ -0.64
SHMT2-207ENST00000553837 IGHV5-51A0A0C4DH38 117 aa11.07□□□□□ -0.64
SHMT2-207ENST00000553837 BCL2L11O43521 198 aa11.07□□□□□ -0.64
SHMT2-207ENST00000553837 GPRIN2O60269 458 aa11.07□□□□□ -0.64
SHMT2-207ENST00000553837 SRPX2O60687 465 aaPredicted RBP11.07□□□□□ -0.64
SHMT2-207ENST00000553837 HEXAP06865 529 aa11.07□□□□□ -0.64
SHMT2-207ENST00000553837 CSF1P09603 554 aa11.07□□□□□ -0.64
SHMT2-207ENST00000553837 RNF224P0DH78 156 aa11.07□□□□□ -0.64
SHMT2-207ENST00000553837 CAPZBP47756 277 aa11.07□□□□□ -0.64
SHMT2-207ENST00000553837 LUMP51884 338 aaPredicted RBP11.07□□□□□ -0.64
SHMT2-207ENST00000553837 TAS2R20P59543 309 aa11.07□□□□□ -0.64
SHMT2-207ENST00000553837 BLOC1S1P78537 153 aa11.07□□□□□ -0.64
SHMT2-207ENST00000553837 FUT7Q11130 342 aa11.07□□□□□ -0.64
SHMT2-207ENST00000553837 JMJD6Q6NYC1 403 aaPredicted RBP11.07□□□□□ -0.64
SHMT2-207ENST00000553837 ZNF595Q8IYB9 648 aa11.07□□□□□ -0.64
SHMT2-207ENST00000553837 WDSUB1Q8N9V3 476 aa11.07□□□□□ -0.64
SHMT2-207ENST00000553837 MIB2Q96AX9 1013 aa11.07□□□□□ -0.64
SHMT2-207ENST00000553837 MMABQ96EY8 250 aaPredicted RBP11.07□□□□□ -0.64
SHMT2-207ENST00000553837 PELI1Q96FA3 418 aa11.07□□□□□ -0.64
SHMT2-207ENST00000553837 ANKRD10Q9NXR5 420 aa11.07□□□□□ -0.64
SHMT2-207ENST00000553837 ICAM5Q9UMF0 924 aa11.07□□□□□ -0.64
SHMT2-207ENST00000553837 PCDHB10Q9UN67 800 aa11.07□□□□□ -0.64
SHMT2-207ENST00000553837 MTCH2Q9Y6C9 303 aa11.07□□□□□ -0.64
SHMT2-207ENST00000553837 EML5Q05BV3 1969 aa11.07□□□□□ -0.64
SHMT2-207ENST00000553837 IGKV1D-42A0A075B6H8 117 aa11.07□□□□□ -0.64
SHMT2-207ENST00000553837 TRBV23-1A0A0A0MS06 115 aa11.07□□□□□ -0.64
SHMT2-207ENST00000553837 TRAV14DV4A0A0A6YYC5 116 aa11.07□□□□□ -0.64
SHMT2-207ENST00000553837 IGHV1OR15-9A0A0B4J2B8 117 aa11.07□□□□□ -0.64
SHMT2-207ENST00000553837 SERINC4A6NH21 518 aa11.07□□□□□ -0.64
SHMT2-207ENST00000553837 TERTO14746 1132 aaKnown RBP11.07□□□□□ -0.64
SHMT2-207ENST00000553837 NSA2O95478 260 aaKnown RBP11.07□□□□□ -0.64
SHMT2-207ENST00000553837 CSTAP01040 98 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms