RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 CPT1CQ8TCG5 803 aa12.14□□□□□ -0.47
APEX1-205ENST00000553555 SNX33Q8WV41 574 aa12.14□□□□□ -0.47
APEX1-205ENST00000553555 ZNF837Q96EG3 531 aaPredicted RBP12.14□□□□□ -0.47
APEX1-205ENST00000553555 GMPPAQ96IJ6 420 aaPredicted RBP12.14□□□□□ -0.47
APEX1-205ENST00000553555 MYCBPQ99417 103 aaPredicted RBP12.14□□□□□ -0.47
APEX1-205ENST00000553555 SLX1AQ9BQ83 275 aa12.14□□□□□ -0.47
APEX1-205ENST00000553555 TTTY10Q9BZA0 68 aa12.14□□□□□ -0.47
APEX1-205ENST00000553555 SLCO5A1Q9H2Y9 848 aa12.14□□□□□ -0.47
APEX1-205ENST00000553555 POLE4Q9NR33 117 aa12.14□□□□□ -0.47
APEX1-205ENST00000553555 BABAM2Q9NXR7 383 aa12.14□□□□□ -0.47
APEX1-205ENST00000553555 KCNG2Q9UJ96 466 aa12.14□□□□□ -0.47
APEX1-205ENST00000553555 CD8B2A6NJW9 211 aa12.13□□□□□ -0.47
APEX1-205ENST00000553555 PRR32B1ATL7 298 aa12.13□□□□□ -0.47
APEX1-205ENST00000553555 J3QLW9 94 aa12.13□□□□□ -0.47
APEX1-205ENST00000553555 MAGEB4O15481 346 aaPredicted RBP12.13□□□□□ -0.47
APEX1-205ENST00000553555 SS18L1O75177 396 aaPredicted RBP12.13□□□□□ -0.47
APEX1-205ENST00000553555 LALBAP00709 142 aa12.13□□□□□ -0.47
APEX1-205ENST00000553555 MT-ND5P03915 603 aa12.13□□□□□ -0.47
APEX1-205ENST00000553555 TPOP07202 933 aa12.13□□□□□ -0.47
APEX1-205ENST00000553555 SPARCP09486 303 aa12.13□□□□□ -0.47
APEX1-205ENST00000553555 SFTPCP11686 197 aa12.13□□□□□ -0.47
APEX1-205ENST00000553555 GABRA1P14867 456 aa12.13□□□□□ -0.47
APEX1-205ENST00000553555 ZNF19P17023 458 aa12.13□□□□□ -0.47
APEX1-205ENST00000553555 AGTR1P30556 359 aa12.13□□□□□ -0.47
APEX1-205ENST00000553555 OR12D2P58182 307 aa12.13□□□□□ -0.47
APEX1-205ENST00000553555 ACTA2P62736 377 aa12.13□□□□□ -0.47
APEX1-205ENST00000553555 ACTG2P63267 376 aa12.13□□□□□ -0.47
APEX1-205ENST00000553555 TSTQ16762 297 aaKnown RBP12.13□□□□□ -0.47
APEX1-205ENST00000553555 TP53I3Q53FA7 332 aa12.13□□□□□ -0.47
APEX1-205ENST00000553555 ZNF684Q5T5D7 378 aa12.13□□□□□ -0.47
APEX1-205ENST00000553555 TSPO2Q5TGU0 170 aa12.13□□□□□ -0.47
APEX1-205ENST00000553555 EGFL6Q8IUX8 553 aa12.13□□□□□ -0.47
APEX1-205ENST00000553555 ZNF454Q8N9F8 522 aa12.13□□□□□ -0.47
APEX1-205ENST00000553555 OR10H5Q8NGA6 315 aa12.13□□□□□ -0.47
APEX1-205ENST00000553555 FAM57AQ8TBR7 257 aa12.13□□□□□ -0.47
APEX1-205ENST00000553555 THEM6Q8WUY1 208 aa12.13□□□□□ -0.47
APEX1-205ENST00000553555 MRPL48Q96GC5 212 aaKnown RBP12.13□□□□□ -0.47
APEX1-205ENST00000553555 C4orf36Q96KX1 117 aa12.13□□□□□ -0.47
APEX1-205ENST00000553555 FUNDC2Q9BWH2 189 aa12.13□□□□□ -0.47
APEX1-205ENST00000553555 CRLF2Q9HC73 371 aa12.13□□□□□ -0.47
APEX1-205ENST00000553555 GPR35Q9HC97 309 aa12.13□□□□□ -0.47
APEX1-205ENST00000553555 ASF1BQ9NVP2 202 aa12.13□□□□□ -0.47
APEX1-205ENST00000553555 ATRXP46100 2492 aa12.13□□□□□ -0.47
APEX1-205ENST00000553555 SPTA1P02549 2419 aa12.13□□□□□ -0.47
APEX1-205ENST00000553555 RP1L1Q8IWN7 2480 aaPredicted RBP12.13□□□□□ -0.47
APEX1-205ENST00000553555 TMCC2O75069 709 aa12.12□□□□□ -0.47
APEX1-205ENST00000553555 WDR1O75083 606 aa12.12□□□□□ -0.47
APEX1-205ENST00000553555 CD36P16671 472 aa12.12□□□□□ -0.47
APEX1-205ENST00000553555 PTGER4P35408 488 aa12.12□□□□□ -0.47
APEX1-205ENST00000553555 TGFBR2P37173 567 aa12.12□□□□□ -0.47
APEX1-205ENST00000553555 GUCA1AP43080 201 aaPredicted RBP12.12□□□□□ -0.47
APEX1-205ENST00000553555 CAPZA2P47755 286 aa12.12□□□□□ -0.47
APEX1-205ENST00000553555 RGS6P49758 472 aa12.12□□□□□ -0.47
APEX1-205ENST00000553555 TPBGQ13641 420 aa12.12□□□□□ -0.47
APEX1-205ENST00000553555 EIF2B1Q14232 305 aaKnown RBP12.12□□□□□ -0.47
APEX1-205ENST00000553555 GUSBP1Q15486 140 aa12.12□□□□□ -0.47
APEX1-205ENST00000553555 SGCAQ16586 387 aa12.12□□□□□ -0.47
APEX1-205ENST00000553555 PRR30Q53SZ7 412 aaPredicted RBP12.12□□□□□ -0.47
APEX1-205ENST00000553555 SLC18B1Q6NT16 456 aa12.12□□□□□ -0.47
APEX1-205ENST00000553555 RPTNQ6XPR3 784 aa12.12□□□□□ -0.47
APEX1-205ENST00000553555 PLEKHG7Q6ZR37 379 aa12.12□□□□□ -0.47
APEX1-205ENST00000553555 VASH1Q7L8A9 365 aaPredicted RBP12.12□□□□□ -0.47
APEX1-205ENST00000553555 KLBQ86Z14 1044 aa12.12□□□□□ -0.47
APEX1-205ENST00000553555 C9orf106Q8NAJ2 232 aa12.12□□□□□ -0.47
APEX1-205ENST00000553555 ASB17Q8WXJ9 295 aa12.12□□□□□ -0.47
APEX1-205ENST00000553555 NABP1Q96AH0 204 aa12.12□□□□□ -0.47
APEX1-205ENST00000553555 APH1AQ96BI3 265 aa12.12□□□□□ -0.47
APEX1-205ENST00000553555 AMELYQ99218 206 aa12.12□□□□□ -0.47
APEX1-205ENST00000553555 CDADC1Q9BWV3 514 aa12.12□□□□□ -0.47
APEX1-205ENST00000553555 EMC7Q9NPA0 242 aa12.12□□□□□ -0.47
APEX1-205ENST00000553555 SLC7A10Q9NS82 523 aa12.12□□□□□ -0.47
APEX1-205ENST00000553555 CYB5R1Q9UHQ9 305 aa12.12□□□□□ -0.47
APEX1-205ENST00000553555 RTTNQ86VV8 2226 aa12.12□□□□□ -0.47
APEX1-205ENST00000553555 SHANK1Q9Y566 2161 aa12.12□□□□□ -0.47
APEX1-205ENST00000553555 RPL36A-HNRNPH2H7BZ11 118 aa12.11□□□□□ -0.47
APEX1-205ENST00000553555 CCRL2O00421 344 aa12.11□□□□□ -0.47
APEX1-205ENST00000553555 IGHV3-9P01782 118 aa12.11□□□□□ -0.47
APEX1-205ENST00000553555 HOXD4P09016 255 aaPredicted RBP12.11□□□□□ -0.47
APEX1-205ENST00000553555 CPEP16870 476 aa12.11□□□□□ -0.47
APEX1-205ENST00000553555 MSR1P21757 451 aa12.11□□□□□ -0.47
APEX1-205ENST00000553555 LSM6P62312 80 aaKnown RBP12.11□□□□□ -0.47
APEX1-205ENST00000553555 MRPS34P82930 218 aaKnown RBP12.11□□□□□ -0.47
APEX1-205ENST00000553555 ROR2Q01974 943 aaKnown RBP12.11□□□□□ -0.47
APEX1-205ENST00000553555 BDH1Q02338 343 aa12.11□□□□□ -0.47
APEX1-205ENST00000553555 EGR3Q06889 387 aa12.11□□□□□ -0.47
APEX1-205ENST00000553555 STK11Q15831 433 aa12.11□□□□□ -0.47
APEX1-205ENST00000553555 SSX1Q16384 188 aa12.11□□□□□ -0.47
APEX1-205ENST00000553555 CEACAM16Q2WEN9 425 aa12.11□□□□□ -0.47
APEX1-205ENST00000553555 RTL6Q6ICC9 239 aa12.11□□□□□ -0.47
APEX1-205ENST00000553555 OR2A2Q6IF42 318 aa12.11□□□□□ -0.47
APEX1-205ENST00000553555 KCTD20Q7Z5Y7 419 aa12.11□□□□□ -0.47
APEX1-205ENST00000553555 CD163Q86VB7 1156 aa12.11□□□□□ -0.47
APEX1-205ENST00000553555 ANKRD13BQ86YJ7 626 aa12.11□□□□□ -0.47
APEX1-205ENST00000553555 LINC00346Q8IVM7 164 aa12.11□□□□□ -0.47
APEX1-205ENST00000553555 ZNF100Q8IYN0 542 aa12.11□□□□□ -0.47
APEX1-205ENST00000553555 HTRA1Q92743 480 aa12.11□□□□□ -0.47
APEX1-205ENST00000553555 ALKBH3Q96Q83 286 aaPredicted RBP12.11□□□□□ -0.47
APEX1-205ENST00000553555 TM9SF2Q99805 663 aa12.11□□□□□ -0.47
APEX1-205ENST00000553555 ABHD6Q9BV23 337 aa12.11□□□□□ -0.47
APEX1-205ENST00000553555 NAA50Q9GZZ1 169 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms