RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 EIF3KQ9UBQ5 218 aaKnown RBP7.64□□□□□ -1.19
SYNE2-209ENST00000553308 ZNF229Q9UJW7 825 aa7.64□□□□□ -1.19
SYNE2-209ENST00000553308 ZDHHC8Q9ULC8 765 aa7.64□□□□□ -1.19
SYNE2-209ENST00000553308 UGT2A1Q9Y4X1 527 aa7.64□□□□□ -1.19
SYNE2-209ENST00000553308 MMP24Q9Y5R2 645 aa7.64□□□□□ -1.19
SYNE2-209ENST00000553308 IGKV1D-43A0A0B4J1Z2 117 aa7.63□□□□□ -1.19
SYNE2-209ENST00000553308 TRAV40A0A0B4J280 105 aa7.63□□□□□ -1.19
SYNE2-209ENST00000553308 MCIDASD6RGH6 385 aa7.63□□□□□ -1.19
SYNE2-209ENST00000553308 BLOC1S5-TXNDC5H3BN57 136 aa7.63□□□□□ -1.19
SYNE2-209ENST00000553308 HOXA3O43365 443 aaPredicted RBP7.63□□□□□ -1.19
SYNE2-209ENST00000553308 FMO6PO60774 539 aa7.63□□□□□ -1.19
SYNE2-209ENST00000553308 TRMUO75648 421 aaKnown RBP7.63□□□□□ -1.19
SYNE2-209ENST00000553308 PLATP00750 562 aa7.63□□□□□ -1.19
SYNE2-209ENST00000553308 KNG1P01042 644 aa7.63□□□□□ -1.19
SYNE2-209ENST00000553308 NGFP01138 241 aa7.63□□□□□ -1.19
SYNE2-209ENST00000553308 F13BP05160 661 aa7.63□□□□□ -1.19
SYNE2-209ENST00000553308 ACADSP16219 412 aa7.63□□□□□ -1.19
SYNE2-209ENST00000553308 SLC6A2P23975 617 aa7.63□□□□□ -1.19
SYNE2-209ENST00000553308 CD80P33681 288 aa7.63□□□□□ -1.19
SYNE2-209ENST00000553308 MTNR1AP48039 350 aa7.63□□□□□ -1.19
SYNE2-209ENST00000553308 GDI2P50395 445 aaKnown RBP7.63□□□□□ -1.19
SYNE2-209ENST00000553308 WDR4P57081 412 aaKnown RBP7.63□□□□□ -1.19
SYNE2-209ENST00000553308 PPP1CBP62140 327 aa7.63□□□□□ -1.19
SYNE2-209ENST00000553308 BTG1P62324 171 aa7.63□□□□□ -1.19
SYNE2-209ENST00000553308 ERVK-25P63136 954 aa7.63□□□□□ -1.19
SYNE2-209ENST00000553308 MRPS34P82930 218 aaKnown RBP7.63□□□□□ -1.19
SYNE2-209ENST00000553308 PSG4Q00888 419 aa7.63□□□□□ -1.19
SYNE2-209ENST00000553308 PAX8Q06710 450 aa7.63□□□□□ -1.19
SYNE2-209ENST00000553308 FMODQ06828 376 aa7.63□□□□□ -1.19
SYNE2-209ENST00000553308 RPL18Q07020 188 aaKnown RBP7.63□□□□□ -1.19
SYNE2-209ENST00000553308 ESCO2Q56NI9 601 aa7.63□□□□□ -1.19
SYNE2-209ENST00000553308 ZMAT1Q5H9K5 638 aa7.63□□□□□ -1.19
SYNE2-209ENST00000553308 MTX3Q5HYI7 312 aa7.63□□□□□ -1.19
SYNE2-209ENST00000553308 PAGE3Q5JUK9 113 aa7.63□□□□□ -1.19
SYNE2-209ENST00000553308 ENTPD8Q5MY95 495 aa7.63□□□□□ -1.19
SYNE2-209ENST00000553308 C10orf128Q5T292 105 aa7.63□□□□□ -1.19
SYNE2-209ENST00000553308 TTC33Q6PID6 262 aaPredicted RBP7.63□□□□□ -1.19
SYNE2-209ENST00000553308 C9orf139Q6ZV77 190 aa7.63□□□□□ -1.19
SYNE2-209ENST00000553308 NANOGNBQ7Z5D8 188 aa7.63□□□□□ -1.19
SYNE2-209ENST00000553308 LRRC28Q86X40 367 aaPredicted RBP7.63□□□□□ -1.19
SYNE2-209ENST00000553308 RBM45Q8IUH3 476 aaKnown RBP7.63□□□□□ -1.19
SYNE2-209ENST00000553308 KIR3DL3Q8N743 410 aa7.63□□□□□ -1.19
SYNE2-209ENST00000553308 ZNF283Q8N7M2 679 aa7.63□□□□□ -1.19
SYNE2-209ENST00000553308 GPR32P1Q8NGA4 272 aa7.63□□□□□ -1.19
SYNE2-209ENST00000553308 OR4D11Q8NGI4 311 aa7.63□□□□□ -1.19
SYNE2-209ENST00000553308 OR6T1Q8NGN1 323 aa7.63□□□□□ -1.19
SYNE2-209ENST00000553308 VANGL1Q8TAA9 524 aaPredicted RBP7.63□□□□□ -1.19
SYNE2-209ENST00000553308 ADAMTS16Q8TE57 1224 aa7.63□□□□□ -1.19
SYNE2-209ENST00000553308 ASB10Q8WXI3 467 aa7.63□□□□□ -1.19
SYNE2-209ENST00000553308 SIGLEC11Q96RL6 698 aa7.63□□□□□ -1.19
SYNE2-209ENST00000553308 ZNF607Q96SK3 696 aa7.63□□□□□ -1.19
SYNE2-209ENST00000553308 PKP2Q99959 881 aa7.63□□□□□ -1.19
SYNE2-209ENST00000553308 KCNN2Q9H2S1 579 aa7.63□□□□□ -1.19
SYNE2-209ENST00000553308 CENPHQ9H3R5 247 aa7.63□□□□□ -1.19
SYNE2-209ENST00000553308 TMEM38AQ9H6F2 299 aa7.63□□□□□ -1.19
SYNE2-209ENST00000553308 SIAEQ9HAT2 523 aa7.63□□□□□ -1.19
SYNE2-209ENST00000553308 TNFRSF19Q9NS68 423 aa7.63□□□□□ -1.19
SYNE2-209ENST00000553308 CGGBP1Q9UFW8 167 aaPredicted RBP7.63□□□□□ -1.19
SYNE2-209ENST00000553308 OR5V1Q9UGF6 321 aa7.63□□□□□ -1.19
SYNE2-209ENST00000553308 KLHL21Q9UJP4 597 aa7.63□□□□□ -1.19
SYNE2-209ENST00000553308 SLC7A7Q9UM01 511 aa7.63□□□□□ -1.19
SYNE2-209ENST00000553308 TRBV5-3A0A0A0MS03 114 aa7.62□□□□□ -1.19
SYNE2-209ENST00000553308 A0A1W2PRG6 482 aa7.62□□□□□ -1.19
SYNE2-209ENST00000553308 FAM181BA6NEQ2 426 aa7.62□□□□□ -1.19
SYNE2-209ENST00000553308 CEACAM18A8MTB9 384 aa7.62□□□□□ -1.19
SYNE2-209ENST00000553308 TIMM8AO60220 97 aaPredicted RBP7.62□□□□□ -1.19
SYNE2-209ENST00000553308 SERPINB7O75635 380 aa7.62□□□□□ -1.19
SYNE2-209ENST00000553308 TGDSO95455 350 aa7.62□□□□□ -1.19
SYNE2-209ENST00000553308 HIST1H2ABP04908 130 aa7.62□□□□□ -1.19
SYNE2-209ENST00000553308 PPIBP23284 216 aaKnown RBP7.62□□□□□ -1.19
SYNE2-209ENST00000553308 LIPAP38571 399 aa7.62□□□□□ -1.19
SYNE2-209ENST00000553308 ZNF133P52736 654 aaPredicted RBP7.62□□□□□ -1.19
SYNE2-209ENST00000553308 UGT2B15P54855 530 aa7.62□□□□□ -1.19
SYNE2-209ENST00000553308 RAG2P55895 527 aa7.62□□□□□ -1.19
SYNE2-209ENST00000553308 RELBQ01201 579 aa7.62□□□□□ -1.19
SYNE2-209ENST00000553308 PAX2Q02962 417 aa7.62□□□□□ -1.19
SYNE2-209ENST00000553308 PSG7Q13046 419 aa7.62□□□□□ -1.19
SYNE2-209ENST00000553308 CDK5R2Q13319 367 aa7.62□□□□□ -1.19
SYNE2-209ENST00000553308 SGCAQ16586 387 aa7.62□□□□□ -1.19
SYNE2-209ENST00000553308 DUSP7Q16829 419 aa7.62□□□□□ -1.19
SYNE2-209ENST00000553308 TNFAIP8L3Q5GJ75 292 aa7.62□□□□□ -1.19
SYNE2-209ENST00000553308 BRICD5Q6PL45 260 aa7.62□□□□□ -1.19
SYNE2-209ENST00000553308 UNQ6126/PRO20091Q6UXV3 157 aa7.62□□□□□ -1.19
SYNE2-209ENST00000553308 Q6ZR03 302 aa7.62□□□□□ -1.19
SYNE2-209ENST00000553308 C17orf107Q6ZR85 190 aa7.62□□□□□ -1.19
SYNE2-209ENST00000553308 RHOUQ7L0Q8 258 aa7.62□□□□□ -1.19
SYNE2-209ENST00000553308 HIST3H2AQ7L7L0 130 aa7.62□□□□□ -1.19
SYNE2-209ENST00000553308 FUNDC1Q8IVP5 155 aa7.62□□□□□ -1.19
SYNE2-209ENST00000553308 OR2Z1Q8NG97 314 aa7.62□□□□□ -1.19
SYNE2-209ENST00000553308 ITLN1Q8WWA0 313 aa7.62□□□□□ -1.19
SYNE2-209ENST00000553308 NSMAFQ92636 917 aa7.62□□□□□ -1.19
SYNE2-209ENST00000553308 HDAC2Q92769 488 aaKnown RBP7.62□□□□□ -1.19
SYNE2-209ENST00000553308 HIST1H2ACQ93077 130 aa7.62□□□□□ -1.19
SYNE2-209ENST00000553308 UPRTQ96BW1 309 aa7.62□□□□□ -1.19
SYNE2-209ENST00000553308 NMD3Q96D46 503 aaKnown RBP7.62□□□□□ -1.19
SYNE2-209ENST00000553308 CCT8L2Q96SF2 557 aa7.62□□□□□ -1.19
SYNE2-209ENST00000553308 ZNF426Q9BUY5 554 aa7.62□□□□□ -1.19
SYNE2-209ENST00000553308 SLC19A3Q9BZV2 496 aa7.62□□□□□ -1.19
SYNE2-209ENST00000553308 OR2H1Q9GZK4 316 aa7.62□□□□□ -1.19
SYNE2-209ENST00000553308 WNT5BQ9H1J7 359 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms