RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 TIGARQ9NQ88 270 aa17.36■□□□□ 0.37
RBFOX1-215ENST00000553186 GLTPQ9NZD2 209 aa17.36■□□□□ 0.37
RBFOX1-215ENST00000553186 FLVCR1Q9Y5Y0 555 aa17.36■□□□□ 0.37
RBFOX1-215ENST00000553186 SHISA3A0PJX4 238 aa17.35■□□□□ 0.37
RBFOX1-215ENST00000553186 WNT11O96014 354 aa17.35■□□□□ 0.37
RBFOX1-215ENST00000553186 ZNF823P16415 610 aa17.35■□□□□ 0.37
RBFOX1-215ENST00000553186 NTF4P34130 210 aa17.35■□□□□ 0.37
RBFOX1-215ENST00000553186 OPRL1P41146 370 aa17.35■□□□□ 0.37
RBFOX1-215ENST00000553186 RPS11P62280 158 aaKnown RBP eCLIP17.35■□□□□ 0.37
RBFOX1-215ENST00000553186 PDSS1Q5T2R2 415 aa17.35■□□□□ 0.37
RBFOX1-215ENST00000553186 MS4A15Q8N5U1 240 aa17.35■□□□□ 0.37
RBFOX1-215ENST00000553186 TMEM54Q969K7 222 aa17.35■□□□□ 0.37
RBFOX1-215ENST00000553186 PDCD1LG2Q9BQ51 273 aa17.35■□□□□ 0.37
RBFOX1-215ENST00000553186 PPIL3Q9H2H8 161 aaKnown RBP17.35■□□□□ 0.37
RBFOX1-215ENST00000553186 SNTG1Q9NSN8 517 aa17.35■□□□□ 0.37
RBFOX1-215ENST00000553186 SSUH2Q9Y2M2 353 aa17.35■□□□□ 0.37
RBFOX1-215ENST00000553186 LIPGQ9Y5X9 500 aa17.35■□□□□ 0.37
RBFOX1-215ENST00000553186 AQP8O94778 261 aa17.35■□□□□ 0.37
RBFOX1-215ENST00000553186 RPP14O95059 124 aaKnown RBP17.35■□□□□ 0.37
RBFOX1-215ENST00000553186 SDHBP21912 280 aa17.35■□□□□ 0.37
RBFOX1-215ENST00000553186 SELENOPP49908 381 aa17.35■□□□□ 0.37
RBFOX1-215ENST00000553186 ZNF133P52736 654 aaPredicted RBP17.35■□□□□ 0.37
RBFOX1-215ENST00000553186 MXD1Q05195 221 aa17.35■□□□□ 0.37
RBFOX1-215ENST00000553186 EIF2B1Q14232 305 aaKnown RBP17.35■□□□□ 0.37
RBFOX1-215ENST00000553186 BCL2A1Q16548 175 aa17.35■□□□□ 0.37
RBFOX1-215ENST00000553186 PHYHD1Q5SRE7 291 aa17.35■□□□□ 0.37
RBFOX1-215ENST00000553186 LRRN1Q6UXK5 716 aa17.35■□□□□ 0.37
RBFOX1-215ENST00000553186 ZNF679Q8IYX0 411 aa17.35■□□□□ 0.37
RBFOX1-215ENST00000553186 NEIL3Q8TAT5 605 aa17.35■□□□□ 0.37
RBFOX1-215ENST00000553186 HAVCR2Q8TDQ0 301 aa17.35■□□□□ 0.37
RBFOX1-215ENST00000553186 ST7LQ8TDW4 575 aa17.35■□□□□ 0.37
RBFOX1-215ENST00000553186 ABTB1Q969K4 478 aaPredicted RBP17.35■□□□□ 0.37
RBFOX1-215ENST00000553186 SLC25A46Q96AG3 418 aa17.35■□□□□ 0.37
RBFOX1-215ENST00000553186 KCNN2Q9H2S1 579 aa17.35■□□□□ 0.37
RBFOX1-215ENST00000553186 TPK1Q9H3S4 243 aa17.35■□□□□ 0.37
RBFOX1-215ENST00000553186 FOXD3Q9UJU5 478 aaPredicted RBP17.35■□□□□ 0.37
RBFOX1-215ENST00000553186 ACOT7O00154 380 aa17.34■□□□□ 0.37
RBFOX1-215ENST00000553186 CYTIPO60759 359 aa17.34■□□□□ 0.37
RBFOX1-215ENST00000553186 CLEC2LP0C7M8 214 aa17.34■□□□□ 0.37
RBFOX1-215ENST00000553186 SOX6P35712 828 aa17.34■□□□□ 0.37
RBFOX1-215ENST00000553186 CSNK1A1P48729 337 aa17.34■□□□□ 0.37
RBFOX1-215ENST00000553186 SRYQ05066 204 aa17.34■□□□□ 0.37
RBFOX1-215ENST00000553186 MRPL28Q13084 256 aaKnown RBP17.34■□□□□ 0.37
RBFOX1-215ENST00000553186 OR13C5Q8NGS8 318 aa17.34■□□□□ 0.37
RBFOX1-215ENST00000553186 OR52N5Q8NH56 324 aa17.34■□□□□ 0.37
RBFOX1-215ENST00000553186 MAP6Q96JE9 813 aa17.34■□□□□ 0.37
RBFOX1-215ENST00000553186 ELOVL3Q9HB03 270 aa17.34■□□□□ 0.37
RBFOX1-215ENST00000553186 FRRS1LQ9P0K9 344 aa17.34■□□□□ 0.37
RBFOX1-215ENST00000553186 UGT2A1Q9Y4X1 527 aa17.34■□□□□ 0.37
RBFOX1-215ENST00000553186 KIAA1549Q9HCM3 1950 aa17.34■□□□□ 0.37
RBFOX1-215ENST00000553186 HSPB2A8KAH6 182 aa17.33■□□□□ 0.37
RBFOX1-215ENST00000553186 ZFPL1O95159 310 aa17.33■□□□□ 0.37
RBFOX1-215ENST00000553186 CDAP32320 146 aa17.33■□□□□ 0.37
RBFOX1-215ENST00000553186 PMP22Q01453 160 aa17.33■□□□□ 0.37
RBFOX1-215ENST00000553186 HSPB2Q16082 182 aa17.33■□□□□ 0.37
RBFOX1-215ENST00000553186 FCRLAQ7L513 359 aa17.33■□□□□ 0.37
RBFOX1-215ENST00000553186 LINC00346Q8IVM7 164 aa17.33■□□□□ 0.37
RBFOX1-215ENST00000553186 SNIP1Q8TAD8 396 aaKnown RBP17.33■□□□□ 0.37
RBFOX1-215ENST00000553186 ZNF775Q96BV0 537 aaPredicted RBP17.33■□□□□ 0.37
RBFOX1-215ENST00000553186 DEFB127Q9H1M4 99 aa17.33■□□□□ 0.37
RBFOX1-215ENST00000553186 CYB5R1Q9UHQ9 305 aa17.33■□□□□ 0.37
RBFOX1-215ENST00000553186 A0A087WV48 116 aa17.33■□□□□ 0.36
RBFOX1-215ENST00000553186 TRAV17A0A0B4J275 112 aa17.33■□□□□ 0.36
RBFOX1-215ENST00000553186 A0A1W2PPL8 197 aa17.33■□□□□ 0.36
RBFOX1-215ENST00000553186 GPRIN2O60269 458 aa17.33■□□□□ 0.36
RBFOX1-215ENST00000553186 ACTL6AO96019 429 aa17.33■□□□□ 0.36
RBFOX1-215ENST00000553186 NR2C1P13056 603 aa17.33■□□□□ 0.36
RBFOX1-215ENST00000553186 RORCP51449 518 aa17.33■□□□□ 0.36
RBFOX1-215ENST00000553186 ACSM3Q53FZ2 586 aa17.33■□□□□ 0.36
RBFOX1-215ENST00000553186 C10orf128Q5T292 105 aa17.33■□□□□ 0.36
RBFOX1-215ENST00000553186 KCTD18Q6PI47 426 aaPredicted RBP17.33■□□□□ 0.36
RBFOX1-215ENST00000553186 DCXRQ7Z4W1 244 aa17.33■□□□□ 0.36
RBFOX1-215ENST00000553186 OR6N1Q8NGY5 312 aa17.33■□□□□ 0.36
RBFOX1-215ENST00000553186 ABHD3Q8WU67 409 aa17.33■□□□□ 0.36
RBFOX1-215ENST00000553186 MROQ9BYG7 248 aa17.33■□□□□ 0.36
RBFOX1-215ENST00000553186 RCE1Q9Y256 329 aa17.33■□□□□ 0.36
RBFOX1-215ENST00000553186 ALKBH1Q13686 389 aaKnown RBP17.32■□□□□ 0.36
RBFOX1-215ENST00000553186 FAM27D1Q5T7N8 215 aa17.32■□□□□ 0.36
RBFOX1-215ENST00000553186 CORO6Q6QEF8 472 aa17.32■□□□□ 0.36
RBFOX1-215ENST00000553186 C20orf196Q8IYI0 205 aa17.32■□□□□ 0.36
RBFOX1-215ENST00000553186 MEIOBQ8N635 442 aa17.32■□□□□ 0.36
RBFOX1-215ENST00000553186 SEC61A2Q9H9S3 476 aa17.32■□□□□ 0.36
RBFOX1-215ENST00000553186 AKIP1Q9NQ31 210 aa17.32■□□□□ 0.36
RBFOX1-215ENST00000553186 CACNA1CQ13936 2221 aa17.32■□□□□ 0.36
RBFOX1-215ENST00000553186 ZNF407Q9C0G0 2248 aa17.32■□□□□ 0.36
RBFOX1-215ENST00000553186 A0A1B0GTH9 108 aa17.32■□□□□ 0.36
RBFOX1-215ENST00000553186 RASGEF1BQ0VAM2 473 aa17.32■□□□□ 0.36
RBFOX1-215ENST00000553186 KCNMB1Q16558 191 aa17.32■□□□□ 0.36
RBFOX1-215ENST00000553186 FDX2Q6P4F2 183 aa17.32■□□□□ 0.36
RBFOX1-215ENST00000553186 SPATC1Q76KD6 591 aa17.32■□□□□ 0.36
RBFOX1-215ENST00000553186 CEACAM19Q7Z692 300 aa17.32■□□□□ 0.36
RBFOX1-215ENST00000553186 OR2G2Q8NGZ5 317 aa17.32■□□□□ 0.36
RBFOX1-215ENST00000553186 INTS12Q96CB8 462 aaKnown RBP17.32■□□□□ 0.36
RBFOX1-215ENST00000553186 C6orf62Q9GZU0 229 aaPredicted RBP17.32■□□□□ 0.36
RBFOX1-215ENST00000553186 A0A075B6Q4 140 aa17.31■□□□□ 0.36
RBFOX1-215ENST00000553186 KRT77Q7Z794 578 aa17.31■□□□□ 0.36
RBFOX1-215ENST00000553186 OR10H5Q8NGA6 315 aa17.31■□□□□ 0.36
RBFOX1-215ENST00000553186 RNF128Q8TEB7 428 aa17.31■□□□□ 0.36
RBFOX1-215ENST00000553186 RGP1Q92546 391 aaPredicted RBP17.31■□□□□ 0.36
RBFOX1-215ENST00000553186 HTRA1Q92743 480 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms