RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 ARFIP2P53365 341 aa6.49□□□□□ -1.37
NEK3-201ENST00000550331 UGT2B15P54855 530 aa6.49□□□□□ -1.37
NEK3-201ENST00000550331 CLRN1P58418 232 aa6.49□□□□□ -1.37
NEK3-201ENST00000550331 ERVS71-1P61550 626 aa6.49□□□□□ -1.37
NEK3-201ENST00000550331 CCL8P80075 99 aa6.49□□□□□ -1.37
NEK3-201ENST00000550331 MRPS34P82930 218 aaKnown RBP6.49□□□□□ -1.37
NEK3-201ENST00000550331 RPL18Q07020 188 aaKnown RBP6.49□□□□□ -1.37
NEK3-201ENST00000550331 VMACQ2NL98 169 aa6.49□□□□□ -1.37
NEK3-201ENST00000550331 ALKBH6Q3KRA9 238 aa6.49□□□□□ -1.37
NEK3-201ENST00000550331 FAM209AQ5JX71 171 aa6.49□□□□□ -1.37
NEK3-201ENST00000550331 C10orf128Q5T292 105 aa6.49□□□□□ -1.37
NEK3-201ENST00000550331 ACSM5Q6NUN0 579 aa6.49□□□□□ -1.37
NEK3-201ENST00000550331 UNQ6126/PRO20091Q6UXV3 157 aa6.49□□□□□ -1.37
NEK3-201ENST00000550331 CCDC80Q76M96 950 aa6.49□□□□□ -1.37
NEK3-201ENST00000550331 TSPYL5Q86VY4 417 aaPredicted RBP6.49□□□□□ -1.37
NEK3-201ENST00000550331 RBM45Q8IUH3 476 aaKnown RBP6.49□□□□□ -1.37
NEK3-201ENST00000550331 RBM15BQ8NDT2 890 aaKnown RBP6.49□□□□□ -1.37
NEK3-201ENST00000550331 OR4M2Q8NGB6 313 aa6.49□□□□□ -1.37
NEK3-201ENST00000550331 OR1J1Q8NGS3 322 aa6.49□□□□□ -1.37
NEK3-201ENST00000550331 SLC26A7Q8TE54 656 aa6.49□□□□□ -1.37
NEK3-201ENST00000550331 FAM216AQ8WUB2 273 aa6.49□□□□□ -1.37
NEK3-201ENST00000550331 ASB10Q8WXI3 467 aa6.49□□□□□ -1.37
NEK3-201ENST00000550331 MCHR2Q969V1 340 aa6.49□□□□□ -1.37
NEK3-201ENST00000550331 TAMM41Q96BW9 452 aa6.49□□□□□ -1.37
NEK3-201ENST00000550331 TIMD4Q96H15 378 aa6.49□□□□□ -1.37
NEK3-201ENST00000550331 TSPAN32Q96QS1 320 aa6.49□□□□□ -1.37
NEK3-201ENST00000550331 JMJD8Q96S16 334 aa6.49□□□□□ -1.37
NEK3-201ENST00000550331 ZNF347Q96SE7 839 aa6.49□□□□□ -1.37
NEK3-201ENST00000550331 CGREF1Q99674 301 aa6.49□□□□□ -1.37
NEK3-201ENST00000550331 PRSS27Q9BQR3 290 aa6.49□□□□□ -1.37
NEK3-201ENST00000550331 RBM4Q9BWF3 364 aaKnown RBP6.49□□□□□ -1.37
NEK3-201ENST00000550331 POLR2J2Q9GZM3 115 aaKnown RBP6.49□□□□□ -1.37
NEK3-201ENST00000550331 POLR2J3Q9H1A7 115 aaKnown RBP6.49□□□□□ -1.37
NEK3-201ENST00000550331 ZNF665Q9H7R5 613 aa6.49□□□□□ -1.37
NEK3-201ENST00000550331 SMURF2Q9HAU4 748 aa6.49□□□□□ -1.37
NEK3-201ENST00000550331 MEPEQ9NQ76 525 aaPredicted RBP6.49□□□□□ -1.37
NEK3-201ENST00000550331 G6PC2Q9NQR9 355 aa6.49□□□□□ -1.37
NEK3-201ENST00000550331 PCDHB10Q9UN67 800 aa6.49□□□□□ -1.37
NEK3-201ENST00000550331 NUP214P35658 2090 aaPredicted RBP6.48□□□□□ -1.37
NEK3-201ENST00000550331 GMNCA6NCL1 334 aa6.48□□□□□ -1.37
NEK3-201ENST00000550331 NPIPB13A6NJU9 1138 aa6.48□□□□□ -1.37
NEK3-201ENST00000550331 NPIPB4C9JG80 1138 aa6.48□□□□□ -1.37
NEK3-201ENST00000550331 MCIDASD6RGH6 385 aa6.48□□□□□ -1.37
NEK3-201ENST00000550331 BLOC1S5-TXNDC5H3BN57 136 aa6.48□□□□□ -1.37
NEK3-201ENST00000550331 TRIM77I1YAP6 450 aa6.48□□□□□ -1.37
NEK3-201ENST00000550331 ICMTO60725 284 aa6.48□□□□□ -1.37
NEK3-201ENST00000550331 MPZL1O95297 269 aa6.48□□□□□ -1.37
NEK3-201ENST00000550331 NR2C1P13056 603 aa6.48□□□□□ -1.37
NEK3-201ENST00000550331 DRD4P21917 467 aa6.48□□□□□ -1.37
NEK3-201ENST00000550331 GATA3P23771 443 aa6.48□□□□□ -1.37
NEK3-201ENST00000550331 STOMP27105 288 aa6.48□□□□□ -1.37
NEK3-201ENST00000550331 APLNRP35414 380 aa6.48□□□□□ -1.37
NEK3-201ENST00000550331 LIMS1P48059 325 aa6.48□□□□□ -1.37
NEK3-201ENST00000550331 DEFA6Q01524 100 aa6.48□□□□□ -1.37
NEK3-201ENST00000550331 MVKQ03426 396 aa6.48□□□□□ -1.37
NEK3-201ENST00000550331 HSF2Q03933 536 aa6.48□□□□□ -1.37
NEK3-201ENST00000550331 NFYCQ13952 458 aa6.48□□□□□ -1.37
NEK3-201ENST00000550331 SELPLGQ14242 412 aa6.48□□□□□ -1.37
NEK3-201ENST00000550331 HFEQ30201 348 aa6.48□□□□□ -1.37
NEK3-201ENST00000550331 PABPC1L2AQ5JQF8 200 aa6.48□□□□□ -1.37
NEK3-201ENST00000550331 ARMC4Q5T2S8 1044 aa6.48□□□□□ -1.37
NEK3-201ENST00000550331 AVPI1Q5T686 147 aa6.48□□□□□ -1.37
NEK3-201ENST00000550331 C1QL2Q7Z5L3 287 aa6.48□□□□□ -1.37
NEK3-201ENST00000550331 C1orf174Q8IYL3 243 aa6.48□□□□□ -1.37
NEK3-201ENST00000550331 CPEB3Q8NE35 698 aaKnown RBP6.48□□□□□ -1.37
NEK3-201ENST00000550331 DYDC1Q8WWB3 177 aa6.48□□□□□ -1.37
NEK3-201ENST00000550331 LIPHQ8WWY8 451 aa6.48□□□□□ -1.37
NEK3-201ENST00000550331 RAB1CQ92928 201 aa6.48□□□□□ -1.37
NEK3-201ENST00000550331 GCDHQ92947 438 aaPredicted RBP6.48□□□□□ -1.37
NEK3-201ENST00000550331 NMD3Q96D46 503 aaKnown RBP6.48□□□□□ -1.37
NEK3-201ENST00000550331 ELMOD3Q96FG2 381 aa6.48□□□□□ -1.37
NEK3-201ENST00000550331 SIKE1Q9BRV8 207 aa6.48□□□□□ -1.37
NEK3-201ENST00000550331 SUCNR1Q9BXA5 334 aa6.48□□□□□ -1.37
NEK3-201ENST00000550331 TMPRSS13Q9BYE2 586 aa6.48□□□□□ -1.37
NEK3-201ENST00000550331 KCNN2Q9H2S1 579 aa6.48□□□□□ -1.37
NEK3-201ENST00000550331 OR51B6Q9H340 312 aa6.48□□□□□ -1.37
NEK3-201ENST00000550331 NANOGQ9H9S0 305 aa6.48□□□□□ -1.37
NEK3-201ENST00000550331 SAP30LQ9HAJ7 183 aa6.48□□□□□ -1.37
NEK3-201ENST00000550331 SIAEQ9HAT2 523 aa6.48□□□□□ -1.37
NEK3-201ENST00000550331 INIPQ9NRY2 104 aa6.48□□□□□ -1.37
NEK3-201ENST00000550331 CYSLTR2Q9NS75 346 aa6.48□□□□□ -1.37
NEK3-201ENST00000550331 DECR2Q9NUI1 292 aa6.48□□□□□ -1.37
NEK3-201ENST00000550331 CGGBP1Q9UFW8 167 aaPredicted RBP6.48□□□□□ -1.37
NEK3-201ENST00000550331 BAG5Q9UL15 447 aa6.48□□□□□ -1.37
NEK3-201ENST00000550331 WIPI2Q9Y4P8 454 aa6.48□□□□□ -1.37
NEK3-201ENST00000550331 UGT2A1Q9Y4X1 527 aa6.48□□□□□ -1.37
NEK3-201ENST00000550331 LOC105371242A0A075B767 164 aa6.47□□□□□ -1.37
NEK3-201ENST00000550331 PLSCR5A0PG75 271 aa6.47□□□□□ -1.37
NEK3-201ENST00000550331 TMEM89A2RUT3 159 aa6.47□□□□□ -1.37
NEK3-201ENST00000550331 HTR3EA5X5Y0 456 aa6.47□□□□□ -1.37
NEK3-201ENST00000550331 H3BSA7 217 aa6.47□□□□□ -1.37
NEK3-201ENST00000550331 TPD52L2O43399 206 aaKnown RBP6.47□□□□□ -1.37
NEK3-201ENST00000550331 PLPP2O43688 288 aa6.47□□□□□ -1.37
NEK3-201ENST00000550331 TRMUO75648 421 aaKnown RBP6.47□□□□□ -1.37
NEK3-201ENST00000550331 OR7A10O76100 309 aa6.47□□□□□ -1.37
NEK3-201ENST00000550331 OR5F1O95221 314 aa6.47□□□□□ -1.37
NEK3-201ENST00000550331 IGHV1-46P01743 117 aa6.47□□□□□ -1.37
NEK3-201ENST00000550331 IGHV2-5P01817 119 aa6.47□□□□□ -1.37
NEK3-201ENST00000550331 F13BP05160 661 aa6.47□□□□□ -1.37
NEK3-201ENST00000550331 ADH4P08319 380 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms