RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 ROPN1BQ9BZX4 212 aaPredicted RBP1.58□□□□□ -2.16
CCDC38-206ENST00000548771 SYNDIG1Q9H7V2 258 aa1.58□□□□□ -2.16
CCDC38-206ENST00000548771 NT5MQ9NPB1 228 aa1.58□□□□□ -2.16
CCDC38-206ENST00000548771 KCNJ16Q9NPI9 418 aa1.58□□□□□ -2.16
CCDC38-206ENST00000548771 CTSFQ9UBX1 484 aa1.58□□□□□ -2.16
CCDC38-206ENST00000548771 PSG8Q9UQ74 426 aa1.58□□□□□ -2.16
CCDC38-206ENST00000548771 IGKV3D-11A0A0A0MRZ8 115 aa1.57□□□□□ -2.16
CCDC38-206ENST00000548771 CLRN2A0PK11 232 aa1.57□□□□□ -2.16
CCDC38-206ENST00000548771 RRP8O43159 456 aaKnown RBP1.57□□□□□ -2.16
CCDC38-206ENST00000548771 SPAG6O75602 509 aa1.57□□□□□ -2.16
CCDC38-206ENST00000548771 TMEM50AO95807 157 aa1.57□□□□□ -2.16
CCDC38-206ENST00000548771 FGGP02679 453 aa1.57□□□□□ -2.16
CCDC38-206ENST00000548771 LINC00869P0C866 280 aa1.57□□□□□ -2.16
CCDC38-206ENST00000548771 POLR2MP0CAP2 368 aa1.57□□□□□ -2.16
CCDC38-206ENST00000548771 IFNA8P32881 189 aa1.57□□□□□ -2.16
CCDC38-206ENST00000548771 HNMTP50135 292 aa1.57□□□□□ -2.16
CCDC38-206ENST00000548771 UBE2HP62256 183 aa1.57□□□□□ -2.16
CCDC38-206ENST00000548771 KCNJ2P63252 427 aa1.57□□□□□ -2.16
CCDC38-206ENST00000548771 ACTG2P63267 376 aa1.57□□□□□ -2.16
CCDC38-206ENST00000548771 PITPNAQ00169 270 aa1.57□□□□□ -2.16
CCDC38-206ENST00000548771 PPIL2Q13356 520 aa1.57□□□□□ -2.16
CCDC38-206ENST00000548771 RGNQ15493 299 aa1.57□□□□□ -2.16
CCDC38-206ENST00000548771 TGFBIQ15582 683 aa1.57□□□□□ -2.16
CCDC38-206ENST00000548771 SMUG1Q53HV7 270 aa1.57□□□□□ -2.16
CCDC38-206ENST00000548771 C6orf226Q5I0X4 101 aa1.57□□□□□ -2.16
CCDC38-206ENST00000548771 CCNJQ5T5M9 372 aa1.57□□□□□ -2.16
CCDC38-206ENST00000548771 ANKRD22Q5VYY1 191 aa1.57□□□□□ -2.16
CCDC38-206ENST00000548771 PRMT9Q6P2P2 845 aa1.57□□□□□ -2.16
CCDC38-206ENST00000548771 DNAJC24Q6P3W2 148 aa1.57□□□□□ -2.16
CCDC38-206ENST00000548771 DUX4L9Q6RFH8 374 aaPredicted RBP1.57□□□□□ -2.16
CCDC38-206ENST00000548771 TEX43Q6ZNM6 134 aa1.57□□□□□ -2.16
CCDC38-206ENST00000548771 WDR86Q86TI4 376 aa1.57□□□□□ -2.16
CCDC38-206ENST00000548771 CALHM1Q8IU99 346 aa1.57□□□□□ -2.16
CCDC38-206ENST00000548771 HSD17B11Q8NBQ5 300 aa1.57□□□□□ -2.16
CCDC38-206ENST00000548771 OR4F6Q8NGB9 312 aa1.57□□□□□ -2.16
CCDC38-206ENST00000548771 OR10R2Q8NGX6 335 aa1.57□□□□□ -2.16
CCDC38-206ENST00000548771 RHEBL1Q8TAI7 183 aa1.57□□□□□ -2.16
CCDC38-206ENST00000548771 FAM49BQ9NUQ9 324 aa1.57□□□□□ -2.16
CCDC38-206ENST00000548771 SLC7A8Q9UHI5 535 aa1.57□□□□□ -2.16
CCDC38-206ENST00000548771 CTNNA3Q9UI47 895 aa1.57□□□□□ -2.16
CCDC38-206ENST00000548771 ZNF639Q9UID6 485 aa1.57□□□□□ -2.16
CCDC38-206ENST00000548771 IKZF2Q9UKS7 526 aa1.57□□□□□ -2.16
CCDC38-206ENST00000548771 CARHSP1Q9Y2V2 147 aaKnown RBP1.57□□□□□ -2.16
CCDC38-206ENST00000548771 IGLV1-50A0A075B6I6 118 aa1.56□□□□□ -2.16
CCDC38-206ENST00000548771 A0A1W2PPV9 198 aa1.56□□□□□ -2.16
CCDC38-206ENST00000548771 OR52A4PA6NMU1 304 aa1.56□□□□□ -2.16
CCDC38-206ENST00000548771 SERPIND1P05546 499 aa1.56□□□□□ -2.16
CCDC38-206ENST00000548771 CT62P0C5K7 136 aa1.56□□□□□ -2.16
CCDC38-206ENST00000548771 UBTFL6P0CB48 400 aaPredicted RBP1.56□□□□□ -2.16
CCDC38-206ENST00000548771 TPMTP51580 245 aa1.56□□□□□ -2.16
CCDC38-206ENST00000548771 YWHAGP61981 247 aaKnown RBP eCLIP1.56□□□□□ -2.16
CCDC38-206ENST00000548771 LOXL1Q08397 574 aaPredicted RBP1.56□□□□□ -2.16
CCDC38-206ENST00000548771 TWF1Q12792 350 aa1.56□□□□□ -2.16
CCDC38-206ENST00000548771 CHIT1Q13231 466 aa1.56□□□□□ -2.16
CCDC38-206ENST00000548771 GK3PQ14409 553 aa1.56□□□□□ -2.16
CCDC38-206ENST00000548771 PIGHQ14442 188 aaPredicted RBP1.56□□□□□ -2.16
CCDC38-206ENST00000548771 IRF4Q15306 451 aa1.56□□□□□ -2.16
CCDC38-206ENST00000548771 SNRNP35Q16560 246 aaKnown RBP1.56□□□□□ -2.16
CCDC38-206ENST00000548771 THEM4Q5T1C6 240 aa1.56□□□□□ -2.16
CCDC38-206ENST00000548771 RAET1LQ5VY80 246 aa1.56□□□□□ -2.16
CCDC38-206ENST00000548771 CEMP1Q6PRD7 247 aaPredicted RBP1.56□□□□□ -2.16
CCDC38-206ENST00000548771 NTM-AS1Q6ZSK4 140 aa1.56□□□□□ -2.16
CCDC38-206ENST00000548771 SLC25A48Q6ZT89 311 aaKnown RBP1.56□□□□□ -2.16
CCDC38-206ENST00000548771 PPP1R42Q7Z4L9 355 aa1.56□□□□□ -2.16
CCDC38-206ENST00000548771 PDIK1LQ8N165 341 aa1.56□□□□□ -2.16
CCDC38-206ENST00000548771 PIBF1Q8WXW3 757 aa1.56□□□□□ -2.16
CCDC38-206ENST00000548771 CNDP1Q96KN2 507 aa1.56□□□□□ -2.16
CCDC38-206ENST00000548771 NPY6RQ99463 290 aa1.56□□□□□ -2.16
CCDC38-206ENST00000548771 FOXC2Q99958 501 aa1.56□□□□□ -2.16
CCDC38-206ENST00000548771 LRRC40Q9H9A6 602 aa1.56□□□□□ -2.16
CCDC38-206ENST00000548771 FN3KRPQ9HA64 309 aa1.56□□□□□ -2.16
CCDC38-206ENST00000548771 SUN2Q9UH99 717 aa1.56□□□□□ -2.16
CCDC38-206ENST00000548771 TMED5Q9Y3A6 229 aa1.56□□□□□ -2.16
CCDC38-206ENST00000548771 YEATS2Q9ULM3 1422 aa1.56□□□□□ -2.16
CCDC38-206ENST00000548771 GPATCH8Q9UKJ3 1502 aaKnown RBP1.56□□□□□ -2.16
CCDC38-206ENST00000548771 ZNF407Q9C0G0 2248 aa1.55□□□□□ -2.16
CCDC38-206ENST00000548771 IGLV3-12A0A075B6K2 115 aa1.55□□□□□ -2.16
CCDC38-206ENST00000548771 ARHGEF35A5YM69 484 aa1.55□□□□□ -2.16
CCDC38-206ENST00000548771 A8MUU9 505 aa1.55□□□□□ -2.16
CCDC38-206ENST00000548771 SPECC1L-ADORA2AF8WAN1 911 aa1.55□□□□□ -2.16
CCDC38-206ENST00000548771 FOXE1O00358 373 aaPredicted RBP1.55□□□□□ -2.16
CCDC38-206ENST00000548771 EEDO75530 441 aaKnown RBP1.55□□□□□ -2.16
CCDC38-206ENST00000548771 SURF6O75683 361 aaKnown RBP1.55□□□□□ -2.16
CCDC38-206ENST00000548771 RP2O75695 350 aa1.55□□□□□ -2.16
CCDC38-206ENST00000548771 IL4P05112 153 aa1.55□□□□□ -2.16
CCDC38-206ENST00000548771 C1GALT1C1LP0DN25 315 aa1.55□□□□□ -2.16
CCDC38-206ENST00000548771 RAB3BP20337 219 aa1.55□□□□□ -2.16
CCDC38-206ENST00000548771 DTYMKP23919 212 aa1.55□□□□□ -2.16
CCDC38-206ENST00000548771 ZNF138P52744 262 aa1.55□□□□□ -2.16
CCDC38-206ENST00000548771 GPX6P59796 221 aa1.55□□□□□ -2.16
CCDC38-206ENST00000548771 MRPS22P82650 360 aaKnown RBP1.55□□□□□ -2.16
CCDC38-206ENST00000548771 ANKDD1AQ495B1 522 aa1.55□□□□□ -2.16
CCDC38-206ENST00000548771 CTSL3PQ5NE16 218 aa1.55□□□□□ -2.16
CCDC38-206ENST00000548771 SPECC1LQ69YQ0 1117 aa1.55□□□□□ -2.16
CCDC38-206ENST00000548771 ARL9Q6T311 187 aa1.55□□□□□ -2.16
CCDC38-206ENST00000548771 CASC1Q6TDU7 716 aa1.55□□□□□ -2.16
CCDC38-206ENST00000548771 RGS9BPQ6ZS82 235 aa1.55□□□□□ -2.16
CCDC38-206ENST00000548771 ASCL5Q7RTU5 278 aa1.55□□□□□ -2.16
CCDC38-206ENST00000548771 NBPF5PQ86XG9 351 aaPredicted RBP1.55□□□□□ -2.16
CCDC38-206ENST00000548771 EIF1ADQ8N9N8 165 aaKnown RBP1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms