RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 CRYBB2P43320 205 aa14.81□□□□□ -0.04
CHMP1A-205ENST00000548650 RPL27P61353 136 aaKnown RBP14.81□□□□□ -0.04
CHMP1A-205ENST00000548650 ERVK-25P63136 954 aa14.81□□□□□ -0.04
CHMP1A-205ENST00000548650 SELENOWP63302 87 aa14.81□□□□□ -0.04
CHMP1A-205ENST00000548650 PSG4Q00888 419 aa14.81□□□□□ -0.04
CHMP1A-205ENST00000548650 SGCAQ16586 387 aa14.81□□□□□ -0.04
CHMP1A-205ENST00000548650 SPATA46Q5T0L3 261 aa14.81□□□□□ -0.04
CHMP1A-205ENST00000548650 FAM27BQ5VT28 67 aa14.81□□□□□ -0.04
CHMP1A-205ENST00000548650 USP51Q70EK9 711 aa14.81□□□□□ -0.04
CHMP1A-205ENST00000548650 VTCN1Q7Z7D3 282 aa14.81□□□□□ -0.04
CHMP1A-205ENST00000548650 MEX3DQ86XN8 651 aaKnown RBP14.81□□□□□ -0.04
CHMP1A-205ENST00000548650 NRMQ8IXM6 262 aa14.81□□□□□ -0.04
CHMP1A-205ENST00000548650 SEMA6DQ8NFY4 1073 aa14.81□□□□□ -0.04
CHMP1A-205ENST00000548650 RCN3Q96D15 328 aa14.81□□□□□ -0.04
CHMP1A-205ENST00000548650 MARS2Q96GW9 593 aaKnown RBP14.81□□□□□ -0.04
CHMP1A-205ENST00000548650 WNT5BQ9H1J7 359 aa14.81□□□□□ -0.04
CHMP1A-205ENST00000548650 KCNN2Q9H2S1 579 aa14.81□□□□□ -0.04
CHMP1A-205ENST00000548650 METTL17Q9H7H0 456 aaPredicted RBP14.81□□□□□ -0.04
CHMP1A-205ENST00000548650 ZNF665Q9H7R5 613 aa14.81□□□□□ -0.04
CHMP1A-205ENST00000548650 CMTM6Q9NX76 183 aa14.81□□□□□ -0.04
CHMP1A-205ENST00000548650 GRIP1Q9Y3R0 1128 aa14.81□□□□□ -0.04
CHMP1A-205ENST00000548650 SNX13Q9Y5W8 968 aa14.81□□□□□ -0.04
CHMP1A-205ENST00000548650 CACNG2Q9Y698 323 aa14.81□□□□□ -0.04
CHMP1A-205ENST00000548650 TRAV27A0A087WT01 109 aa14.8□□□□□ -0.04
CHMP1A-205ENST00000548650 C5orf49A4QMS7 147 aa14.8□□□□□ -0.04
CHMP1A-205ENST00000548650 FFAR1O14842 300 aa14.8□□□□□ -0.04
CHMP1A-205ENST00000548650 ICMTO60725 284 aa14.8□□□□□ -0.04
CHMP1A-205ENST00000548650 DEAF1O75398 565 aaPredicted RBP14.8□□□□□ -0.04
CHMP1A-205ENST00000548650 DRD4P21917 467 aa14.8□□□□□ -0.04
CHMP1A-205ENST00000548650 LAP3P28838 519 aa14.8□□□□□ -0.04
CHMP1A-205ENST00000548650 MMP15P51511 669 aa14.8□□□□□ -0.04
CHMP1A-205ENST00000548650 MVKQ03426 396 aa14.8□□□□□ -0.04
CHMP1A-205ENST00000548650 FAM205BPQ63HN1 556 aa14.8□□□□□ -0.04
CHMP1A-205ENST00000548650 LRRC37BQ96QE4 947 aa14.8□□□□□ -0.04
CHMP1A-205ENST00000548650 OR2H1Q9GZK4 316 aa14.8□□□□□ -0.04
CHMP1A-205ENST00000548650 SAP30LQ9HAJ7 183 aa14.8□□□□□ -0.04
CHMP1A-205ENST00000548650 ARMCX1Q9P291 453 aa14.8□□□□□ -0.04
CHMP1A-205ENST00000548650 RHCGQ9UBD6 479 aa14.8□□□□□ -0.04
CHMP1A-205ENST00000548650 TRAV20A0A0B4J274 112 aa14.79□□□□□ -0.04
CHMP1A-205ENST00000548650 ZSCAN5BA6NJL1 495 aa14.79□□□□□ -0.04
CHMP1A-205ENST00000548650 J3KTA2 159 aa14.79□□□□□ -0.04
CHMP1A-205ENST00000548650 SLC22A2O15244 555 aa14.79□□□□□ -0.04
CHMP1A-205ENST00000548650 IGHV1-46P01743 117 aa14.79□□□□□ -0.04
CHMP1A-205ENST00000548650 MT-ND5P03915 603 aa14.79□□□□□ -0.04
CHMP1A-205ENST00000548650 IFNW1P05000 195 aa14.79□□□□□ -0.04
CHMP1A-205ENST00000548650 CST2P09228 141 aa14.79□□□□□ -0.04
CHMP1A-205ENST00000548650 YAP1P46937 504 aaKnown RBP14.79□□□□□ -0.04
CHMP1A-205ENST00000548650 GDI2P50395 445 aaKnown RBP14.79□□□□□ -0.04
CHMP1A-205ENST00000548650 ZNF81P51508 661 aa14.79□□□□□ -0.04
CHMP1A-205ENST00000548650 CTXN1P60606 82 aa14.79□□□□□ -0.04
CHMP1A-205ENST00000548650 TEKQ02763 1124 aa14.79□□□□□ -0.04
CHMP1A-205ENST00000548650 ENDOGQ14249 297 aaKnown RBP14.79□□□□□ -0.04
CHMP1A-205ENST00000548650 TSTQ16762 297 aaKnown RBP14.79□□□□□ -0.04
CHMP1A-205ENST00000548650 FAM209AQ5JX71 171 aa14.79□□□□□ -0.04
CHMP1A-205ENST00000548650 THEM4Q5T1C6 240 aa14.79□□□□□ -0.04
CHMP1A-205ENST00000548650 MBNL2Q5VZF2 373 aaKnown RBP14.79□□□□□ -0.04
CHMP1A-205ENST00000548650 ARPINQ7Z6K5 226 aa14.79□□□□□ -0.04
CHMP1A-205ENST00000548650 POU5F2Q8N7G0 328 aa14.79□□□□□ -0.04
CHMP1A-205ENST00000548650 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.79□□□□□ -0.04
CHMP1A-205ENST00000548650 OR13C2Q8NGS9 318 aa14.79□□□□□ -0.04
CHMP1A-205ENST00000548650 SLC25A40Q8TBP6 338 aa14.79□□□□□ -0.04
CHMP1A-205ENST00000548650 FNDC8Q8TC99 324 aa14.79□□□□□ -0.04
CHMP1A-205ENST00000548650 LZICQ8WZA0 190 aa14.79□□□□□ -0.04
CHMP1A-205ENST00000548650 G6PC2Q9NQR9 355 aa14.79□□□□□ -0.04
CHMP1A-205ENST00000548650 ZNF446Q9NWS9 450 aa14.79□□□□□ -0.04
CHMP1A-205ENST00000548650 METRNQ9UJH8 293 aa14.79□□□□□ -0.04
CHMP1A-205ENST00000548650 WIPI2Q9Y4P8 454 aa14.79□□□□□ -0.04
CHMP1A-205ENST00000548650 TENM1Q9UKZ4 2725 aa14.78□□□□□ -0.04
CHMP1A-205ENST00000548650 CLDN25C9JDP6 229 aa14.78□□□□□ -0.04
CHMP1A-205ENST00000548650 PRSS23O95084 383 aa14.78□□□□□ -0.04
CHMP1A-205ENST00000548650 VENTXO95231 258 aa14.78□□□□□ -0.04
CHMP1A-205ENST00000548650 PNPP00491 289 aa14.78□□□□□ -0.04
CHMP1A-205ENST00000548650 IGHV2-5P01817 119 aa14.78□□□□□ -0.04
CHMP1A-205ENST00000548650 ADH4P08319 380 aa14.78□□□□□ -0.04
CHMP1A-205ENST00000548650 IFNA8P32881 189 aa14.78□□□□□ -0.04
CHMP1A-205ENST00000548650 PRKCDQ05655 676 aa14.78□□□□□ -0.04
CHMP1A-205ENST00000548650 TRAM2Q15035 370 aa14.78□□□□□ -0.04
CHMP1A-205ENST00000548650 MOGQ16653 247 aa14.78□□□□□ -0.04
CHMP1A-205ENST00000548650 ZNF718Q3SXZ3 478 aa14.78□□□□□ -0.04
CHMP1A-205ENST00000548650 SHQ1Q6PI26 577 aaKnown RBP14.78□□□□□ -0.04
CHMP1A-205ENST00000548650 C1orf229Q6ZS94 237 aaPredicted RBP14.78□□□□□ -0.04
CHMP1A-205ENST00000548650 SLC15A3Q8IY34 581 aa14.78□□□□□ -0.04
CHMP1A-205ENST00000548650 FAM156AQ8NDB6 213 aa14.78□□□□□ -0.04
CHMP1A-205ENST00000548650 OR51A7Q8NH64 312 aa14.78□□□□□ -0.04
CHMP1A-205ENST00000548650 ABHD4Q8TB40 342 aa14.78□□□□□ -0.04
CHMP1A-205ENST00000548650 KLF14Q8TD94 323 aaPredicted RBP14.78□□□□□ -0.04
CHMP1A-205ENST00000548650 GEMIN6Q8WXD5 167 aaKnown RBP14.78□□□□□ -0.04
CHMP1A-205ENST00000548650 RBP7Q96R05 134 aa14.78□□□□□ -0.04
CHMP1A-205ENST00000548650 OR2J1Q9GZK6 312 aa14.78□□□□□ -0.04
CHMP1A-205ENST00000548650 DECR2Q9NUI1 292 aa14.78□□□□□ -0.04
CHMP1A-205ENST00000548650 EIF3KQ9UBQ5 218 aaKnown RBP14.78□□□□□ -0.04
CHMP1A-205ENST00000548650 A0A1W2PPL8 197 aa14.77□□□□□ -0.05
CHMP1A-205ENST00000548650 A6NIZ1 184 aa14.77□□□□□ -0.05
CHMP1A-205ENST00000548650 EFCAB9A8MZ26 197 aa14.77□□□□□ -0.05
CHMP1A-205ENST00000548650 H3BSA7 217 aa14.77□□□□□ -0.05
CHMP1A-205ENST00000548650 H7C1C5 153 aa14.77□□□□□ -0.05
CHMP1A-205ENST00000548650 HAX1O00165 279 aa14.77□□□□□ -0.05
CHMP1A-205ENST00000548650 NME4O00746 187 aa14.77□□□□□ -0.05
CHMP1A-205ENST00000548650 TPD52L2O43399 206 aaKnown RBP14.77□□□□□ -0.05
CHMP1A-205ENST00000548650 SPRY3O43610 288 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms