RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 GDF2Q9UK05 429 aaPredicted RBP16.19■□□□□ 0.18
PRPF40B-206ENST00000547764 CDH10Q9Y6N8 788 aa16.19■□□□□ 0.18
PRPF40B-206ENST00000547764 GNGT2O14610 69 aa16.18■□□□□ 0.18
PRPF40B-206ENST00000547764 IGHV4-39P01824 125 aa16.18■□□□□ 0.18
PRPF40B-206ENST00000547764 CST2P09228 141 aa16.18■□□□□ 0.18
PRPF40B-206ENST00000547764 HIST1H1CP16403 213 aaKnown RBP16.18■□□□□ 0.18
PRPF40B-206ENST00000547764 MSR1P21757 451 aa16.18■□□□□ 0.18
PRPF40B-206ENST00000547764 PLP2Q04941 152 aa16.18■□□□□ 0.18
PRPF40B-206ENST00000547764 GK3PQ14409 553 aa16.18■□□□□ 0.18
PRPF40B-206ENST00000547764 PABPC1L2AQ5JQF8 200 aa16.18■□□□□ 0.18
PRPF40B-206ENST00000547764 CLEC12AQ5QGZ9 265 aa16.18■□□□□ 0.18
PRPF40B-206ENST00000547764 RPL13AP3Q6NVV1 102 aa16.18■□□□□ 0.18
PRPF40B-206ENST00000547764 RASSF6Q6ZTQ3 369 aa16.18■□□□□ 0.18
PRPF40B-206ENST00000547764 PAPD5Q8NDF8 572 aaKnown RBP16.18■□□□□ 0.18
PRPF40B-206ENST00000547764 CPEB3Q8NE35 698 aaKnown RBP16.18■□□□□ 0.18
PRPF40B-206ENST00000547764 OR10G2Q8NGC3 310 aa16.18■□□□□ 0.18
PRPF40B-206ENST00000547764 SLCO4A1Q96BD0 722 aa16.18■□□□□ 0.18
PRPF40B-206ENST00000547764 Q96MF0 132 aa16.18■□□□□ 0.18
PRPF40B-206ENST00000547764 FOXN4Q96NZ1 517 aa16.18■□□□□ 0.18
PRPF40B-206ENST00000547764 DGCR6LQ9BY27 220 aa16.18■□□□□ 0.18
PRPF40B-206ENST00000547764 PLA2G12AQ9BZM1 189 aa16.18■□□□□ 0.18
PRPF40B-206ENST00000547764 NUAK2Q9H093 628 aa16.18■□□□□ 0.18
PRPF40B-206ENST00000547764 LRMDAQ9H2I8 198 aa16.18■□□□□ 0.18
PRPF40B-206ENST00000547764 MMADHCQ9H3L0 296 aaPredicted RBP16.18■□□□□ 0.18
PRPF40B-206ENST00000547764 RERGLQ9H628 205 aa16.18■□□□□ 0.18
PRPF40B-206ENST00000547764 IL20Q9NYY1 176 aa16.18■□□□□ 0.18
PRPF40B-206ENST00000547764 SPEF1Q9Y4P9 236 aa16.18■□□□□ 0.18
PRPF40B-206ENST00000547764 ACANP16112 2415 aa16.18■□□□□ 0.18
PRPF40B-206ENST00000547764 RTTNQ86VV8 2226 aa16.18■□□□□ 0.18
PRPF40B-206ENST00000547764 IQCMA0A1B0GVH7 501 aa16.17■□□□□ 0.18
PRPF40B-206ENST00000547764 IDH3BO43837 385 aa16.17■□□□□ 0.18
PRPF40B-206ENST00000547764 FKBP6O75344 327 aa16.17■□□□□ 0.18
PRPF40B-206ENST00000547764 KHDRBS3O75525 346 aaKnown RBP16.17■□□□□ 0.18
PRPF40B-206ENST00000547764 PTHP01270 115 aa16.17■□□□□ 0.18
PRPF40B-206ENST00000547764 BMP4P12644 408 aa16.17■□□□□ 0.18
PRPF40B-206ENST00000547764 CCL2P13500 99 aa16.17■□□□□ 0.18
PRPF40B-206ENST00000547764 NOS3P29474 1203 aa16.17■□□□□ 0.18
PRPF40B-206ENST00000547764 CBX1P83916 185 aa16.17■□□□□ 0.18
PRPF40B-206ENST00000547764 PSG4Q00888 419 aa16.17■□□□□ 0.18
PRPF40B-206ENST00000547764 GALK2Q01415 458 aa16.17■□□□□ 0.18
PRPF40B-206ENST00000547764 HSF2Q03933 536 aa16.17■□□□□ 0.18
PRPF40B-206ENST00000547764 ENDOGQ14249 297 aaKnown RBP16.17■□□□□ 0.18
PRPF40B-206ENST00000547764 EFNB3Q15768 340 aa16.17■□□□□ 0.18
PRPF40B-206ENST00000547764 LEG1Q6P5S2 330 aa16.17■□□□□ 0.18
PRPF40B-206ENST00000547764 UGT2A3Q6UWM9 527 aa16.17■□□□□ 0.18
PRPF40B-206ENST00000547764 TMEM179BQ7Z7N9 219 aa16.17■□□□□ 0.18
PRPF40B-206ENST00000547764 JAZF1Q86VZ6 243 aa16.17■□□□□ 0.18
PRPF40B-206ENST00000547764 PAQR4Q8N4S7 273 aaPredicted RBP16.17■□□□□ 0.18
PRPF40B-206ENST00000547764 OR52L1Q8NGH7 329 aa16.17■□□□□ 0.18
PRPF40B-206ENST00000547764 OR4K13Q8NH42 304 aa16.17■□□□□ 0.18
PRPF40B-206ENST00000547764 GIPC3Q8TF64 312 aa16.17■□□□□ 0.18
PRPF40B-206ENST00000547764 NMNAT3Q96T66 252 aa16.17■□□□□ 0.18
PRPF40B-206ENST00000547764 ZNF416Q9BWM5 594 aa16.17■□□□□ 0.18
PRPF40B-206ENST00000547764 C1orf198Q9H425 327 aa16.17■□□□□ 0.18
PRPF40B-206ENST00000547764 YY1AP1Q9H869 796 aa16.17■□□□□ 0.18
PRPF40B-206ENST00000547764 EMC7Q9NPA0 242 aa16.17■□□□□ 0.18
PRPF40B-206ENST00000547764 DLL4Q9NR61 685 aa16.17■□□□□ 0.18
PRPF40B-206ENST00000547764 COA3Q9Y2R0 106 aaPredicted RBP16.17■□□□□ 0.18
PRPF40B-206ENST00000547764 FLNAP21333 2647 aaKnown RBP16.16■□□□□ 0.18
PRPF40B-206ENST00000547764 ARFGEF3Q5TH69 2177 aa16.16■□□□□ 0.18
PRPF40B-206ENST00000547764 VSTM5A8MXK1 200 aa16.16■□□□□ 0.18
PRPF40B-206ENST00000547764 B9A039 149 aa16.16■□□□□ 0.18
PRPF40B-206ENST00000547764 H7C417 338 aa16.16■□□□□ 0.18
PRPF40B-206ENST00000547764 GPRIN2O60269 458 aa16.16■□□□□ 0.18
PRPF40B-206ENST00000547764 IGFBP1P08833 259 aaPredicted RBP16.16■□□□□ 0.18
PRPF40B-206ENST00000547764 GSTM3P21266 225 aa16.16■□□□□ 0.18
PRPF40B-206ENST00000547764 APEX1P27695 318 aaKnown RBP16.16■□□□□ 0.18
PRPF40B-206ENST00000547764 TBC1D28Q2M2D7 210 aa16.16■□□□□ 0.18
PRPF40B-206ENST00000547764 SLC35F1Q5T1Q4 408 aa16.16■□□□□ 0.18
PRPF40B-206ENST00000547764 GLB1L2Q8IW92 636 aa16.16■□□□□ 0.18
PRPF40B-206ENST00000547764 OR8D4Q8NGM9 314 aa16.16■□□□□ 0.18
PRPF40B-206ENST00000547764 AKR7LQ8NHP1 331 aa16.16■□□□□ 0.18
PRPF40B-206ENST00000547764 TSSK2Q96PF2 358 aa16.16■□□□□ 0.18
PRPF40B-206ENST00000547764 SNX18Q96RF0 628 aa16.16■□□□□ 0.18
PRPF40B-206ENST00000547764 FEVQ99581 238 aa16.16■□□□□ 0.18
PRPF40B-206ENST00000547764 OR2H1Q9GZK4 316 aa16.16■□□□□ 0.18
PRPF40B-206ENST00000547764 CDH20Q9HBT6 801 aa16.16■□□□□ 0.18
PRPF40B-206ENST00000547764 TIMM10BQ9Y5J6 103 aa16.16■□□□□ 0.18
PRPF40B-206ENST00000547764 PMF1-BGLAPU3KQ54 211 aa16.16■□□□□ 0.18
PRPF40B-206ENST00000547764 C12orf71A8MTZ7 269 aa16.15■□□□□ 0.18
PRPF40B-206ENST00000547764 DCTN6O00399 190 aa16.15■□□□□ 0.18
PRPF40B-206ENST00000547764 BHLHE40O14503 412 aa16.15■□□□□ 0.18
PRPF40B-206ENST00000547764 MPZL1O95297 269 aa16.15■□□□□ 0.18
PRPF40B-206ENST00000547764 RENP00797 406 aa16.15■□□□□ 0.18
PRPF40B-206ENST00000547764 CRABP1P29762 137 aa16.15■□□□□ 0.18
PRPF40B-206ENST00000547764 GLRXP35754 106 aa16.15■□□□□ 0.18
PRPF40B-206ENST00000547764 PCBD1P61457 104 aa16.15■□□□□ 0.18
PRPF40B-206ENST00000547764 SNRPD2P62316 118 aaKnown RBP16.15■□□□□ 0.18
PRPF40B-206ENST00000547764 DBPQ10586 325 aaPredicted RBP16.15■□□□□ 0.18
PRPF40B-206ENST00000547764 RAB35Q15286 201 aa16.15■□□□□ 0.18
PRPF40B-206ENST00000547764 MSMPQ1L6U9 139 aa16.15■□□□□ 0.18
PRPF40B-206ENST00000547764 OTPQ5XKR4 325 aa16.15■□□□□ 0.18
PRPF40B-206ENST00000547764 OR6V1Q8N148 313 aa16.15■□□□□ 0.18
PRPF40B-206ENST00000547764 OR52E2Q8NGJ4 325 aa16.15■□□□□ 0.18
PRPF40B-206ENST00000547764 OR1J2Q8NGS2 313 aa16.15■□□□□ 0.18
PRPF40B-206ENST00000547764 NIPSNAP1Q9BPW8 284 aa16.15■□□□□ 0.18
PRPF40B-206ENST00000547764 WNT5BQ9H1J7 359 aa16.15■□□□□ 0.18
PRPF40B-206ENST00000547764 PLK3Q9H4B4 646 aa16.15■□□□□ 0.18
PRPF40B-206ENST00000547764 BARX1Q9HBU1 254 aaPredicted RBP16.15■□□□□ 0.18
PRPF40B-206ENST00000547764 SRA1Q9HD15 236 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms