RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 TAS2R1Q9NYW7 299 aa13.18□□□□□ -0.3
SSH1-204ENST00000546697 GRHPRQ9UBQ7 328 aa13.18□□□□□ -0.3
SSH1-204ENST00000546697 CHD3Q12873 2000 aaKnown RBP13.17□□□□□ -0.3
SSH1-204ENST00000546697 LOC390937A0A1W2PQ73 354 aa13.17□□□□□ -0.3
SSH1-204ENST00000546697 CD5LO43866 347 aa13.17□□□□□ -0.3
SSH1-204ENST00000546697 ZNF32P17041 273 aa13.17□□□□□ -0.3
SSH1-204ENST00000546697 CDAP32320 146 aa13.17□□□□□ -0.3
SSH1-204ENST00000546697 PCBD1P61457 104 aa13.17□□□□□ -0.3
SSH1-204ENST00000546697 ERVK-25P63136 954 aa13.17□□□□□ -0.3
SSH1-204ENST00000546697 PSG4Q00888 419 aa13.17□□□□□ -0.3
SSH1-204ENST00000546697 PLP2Q04941 152 aa13.17□□□□□ -0.3
SSH1-204ENST00000546697 TOP3AQ13472 1001 aaPredicted RBP13.17□□□□□ -0.3
SSH1-204ENST00000546697 GK3PQ14409 553 aa13.17□□□□□ -0.3
SSH1-204ENST00000546697 TBC1D28Q2M2D7 210 aa13.17□□□□□ -0.3
SSH1-204ENST00000546697 RFX4Q33E94 735 aa13.17□□□□□ -0.3
SSH1-204ENST00000546697 PABPC1L2AQ5JQF8 200 aa13.17□□□□□ -0.3
SSH1-204ENST00000546697 SMARCD3Q6STE5 483 aa13.17□□□□□ -0.3
SSH1-204ENST00000546697 ZDHHC21Q8IVQ6 265 aa13.17□□□□□ -0.3
SSH1-204ENST00000546697 SVOPLQ8N434 492 aa13.17□□□□□ -0.3
SSH1-204ENST00000546697 PAQR4Q8N4S7 273 aaPredicted RBP13.17□□□□□ -0.3
SSH1-204ENST00000546697 OR4C15Q8NGM1 316 aa13.17□□□□□ -0.3
SSH1-204ENST00000546697 HTRA1Q92743 480 aa13.17□□□□□ -0.3
SSH1-204ENST00000546697 ASB9Q96DX5 294 aa13.17□□□□□ -0.3
SSH1-204ENST00000546697 ZNF570Q96NI8 536 aa13.17□□□□□ -0.3
SSH1-204ENST00000546697 BCL2L14Q9BZR8 327 aa13.17□□□□□ -0.3
SSH1-204ENST00000546697 RAB1BQ9H0U4 201 aa13.17□□□□□ -0.3
SSH1-204ENST00000546697 MS4A5Q9H3V2 200 aa13.17□□□□□ -0.3
SSH1-204ENST00000546697 ATPIF1Q9UII2 106 aa13.17□□□□□ -0.3
SSH1-204ENST00000546697 LYVE1Q9Y5Y7 322 aa13.17□□□□□ -0.3
SSH1-204ENST00000546697 YLPM1P49750 1951 aaKnown RBP13.17□□□□□ -0.3
SSH1-204ENST00000546697 RTTNQ86VV8 2226 aa13.17□□□□□ -0.3
SSH1-204ENST00000546697 IQCMA0A1B0GVH7 501 aa13.16□□□□□ -0.3
SSH1-204ENST00000546697 UNC119BA6NIH7 251 aa13.16□□□□□ -0.3
SSH1-204ENST00000546697 H3BSA7 217 aa13.16□□□□□ -0.3
SSH1-204ENST00000546697 ACOT8O14734 319 aa13.16□□□□□ -0.3
SSH1-204ENST00000546697 SMAD7O15105 426 aaKnown RBP13.16□□□□□ -0.3
SSH1-204ENST00000546697 TLX2O43763 284 aaPredicted RBP13.16□□□□□ -0.3
SSH1-204ENST00000546697 IDH3BO43837 385 aa13.16□□□□□ -0.3
SSH1-204ENST00000546697 HOXB6P17509 224 aaKnown RBP13.16□□□□□ -0.3
SSH1-204ENST00000546697 MSR1P21757 451 aa13.16□□□□□ -0.3
SSH1-204ENST00000546697 RRM2P31350 389 aa13.16□□□□□ -0.3
SSH1-204ENST00000546697 RPL4P36578 427 aaKnown RBP13.16□□□□□ -0.3
SSH1-204ENST00000546697 IFNGR2P38484 337 aa13.16□□□□□ -0.3
SSH1-204ENST00000546697 RAD52P43351 418 aa13.16□□□□□ -0.3
SSH1-204ENST00000546697 UCP2P55851 309 aa13.16□□□□□ -0.3
SSH1-204ENST00000546697 LSM6P62312 80 aaKnown RBP13.16□□□□□ -0.3
SSH1-204ENST00000546697 MRPS11P82912 194 aaKnown RBP13.16□□□□□ -0.3
SSH1-204ENST00000546697 MS4A2Q01362 244 aa13.16□□□□□ -0.3
SSH1-204ENST00000546697 GALK2Q01415 458 aa13.16□□□□□ -0.3
SSH1-204ENST00000546697 TSPAN31Q12999 210 aa13.16□□□□□ -0.3
SSH1-204ENST00000546697 KRR1Q13601 381 aaKnown RBP13.16□□□□□ -0.3
SSH1-204ENST00000546697 VHLLQ6RSH7 139 aa13.16□□□□□ -0.3
SSH1-204ENST00000546697 ZNF786Q8N393 782 aa13.16□□□□□ -0.3
SSH1-204ENST00000546697 OR2H1Q9GZK4 316 aa13.16□□□□□ -0.3
SSH1-204ENST00000546697 WNT5BQ9H1J7 359 aa13.16□□□□□ -0.3
SSH1-204ENST00000546697 LRMDAQ9H2I8 198 aa13.16□□□□□ -0.3
SSH1-204ENST00000546697 KCNN2Q9H2S1 579 aa13.16□□□□□ -0.3
SSH1-204ENST00000546697 AURKCQ9UQB9 309 aa13.16□□□□□ -0.3
SSH1-204ENST00000546697 TIMM10BQ9Y5J6 103 aa13.16□□□□□ -0.3
SSH1-204ENST00000546697 SVEP1Q4LDE5 3571 aa13.15□□□□□ -0.3
SSH1-204ENST00000546697 LOC100509620A0A075B734 347 aa13.15□□□□□ -0.3
SSH1-204ENST00000546697 C12orf71A8MTZ7 269 aa13.15□□□□□ -0.3
SSH1-204ENST00000546697 XKRYO14609 159 aa13.15□□□□□ -0.3
SSH1-204ENST00000546697 SCG5P05408 212 aa13.15□□□□□ -0.3
SSH1-204ENST00000546697 CTLA4P16410 223 aa13.15□□□□□ -0.3
SSH1-204ENST00000546697 TUBG1P23258 451 aa13.15□□□□□ -0.3
SSH1-204ENST00000546697 STOMP27105 288 aa13.15□□□□□ -0.3
SSH1-204ENST00000546697 LAP3P28838 519 aa13.15□□□□□ -0.3
SSH1-204ENST00000546697 NR4A2P43354 598 aa13.15□□□□□ -0.3
SSH1-204ENST00000546697 PDLIM4P50479 330 aa13.15□□□□□ -0.3
SSH1-204ENST00000546697 RPS6KA3P51812 740 aa13.15□□□□□ -0.3
SSH1-204ENST00000546697 MXRA7P84157 204 aa13.15□□□□□ -0.3
SSH1-204ENST00000546697 SPIBQ01892 262 aa13.15□□□□□ -0.3
SSH1-204ENST00000546697 TRAP1Q12931 704 aaKnown RBP13.15□□□□□ -0.3
SSH1-204ENST00000546697 PGBD2Q6P3X8 592 aa13.15□□□□□ -0.3
SSH1-204ENST00000546697 PGM2L1Q6PCE3 622 aa13.15□□□□□ -0.3
SSH1-204ENST00000546697 ZNF620Q6ZNG0 422 aa13.15□□□□□ -0.3
SSH1-204ENST00000546697 RINLQ6ZS11 566 aa13.15□□□□□ -0.3
SSH1-204ENST00000546697 PTCHD4Q6ZW05 846 aa13.15□□□□□ -0.3
SSH1-204ENST00000546697 LRRC18Q8N456 261 aa13.15□□□□□ -0.3
SSH1-204ENST00000546697 ZNF540Q8NDQ6 660 aa13.15□□□□□ -0.3
SSH1-204ENST00000546697 OR52J3Q8NH60 311 aa13.15□□□□□ -0.3
SSH1-204ENST00000546697 NSMAFQ92636 917 aa13.15□□□□□ -0.3
SSH1-204ENST00000546697 ZNF416Q9BWM5 594 aa13.15□□□□□ -0.3
SSH1-204ENST00000546697 OR52D1Q9H346 318 aa13.15□□□□□ -0.3
SSH1-204ENST00000546697 RNF121Q9H920 327 aa13.15□□□□□ -0.3
SSH1-204ENST00000546697 TUBG2Q9NRH3 451 aa13.15□□□□□ -0.3
SSH1-204ENST00000546697 TMEM160Q9NX00 188 aa13.15□□□□□ -0.3
SSH1-204ENST00000546697 NKIRAS2Q9NYR9 191 aa13.15□□□□□ -0.3
SSH1-204ENST00000546697 IL20Q9NYY1 176 aa13.15□□□□□ -0.3
SSH1-204ENST00000546697 ABCA2Q9BZC7 2435 aa13.15□□□□□ -0.3
SSH1-204ENST00000546697 M0R233 179 aa13.14□□□□□ -0.31
SSH1-204ENST00000546697 LY6HO94772 140 aa13.14□□□□□ -0.31
SSH1-204ENST00000546697 IGHV3-13P01766 116 aa13.14□□□□□ -0.31
SSH1-204ENST00000546697 ERCC1P07992 297 aaPredicted RBP13.14□□□□□ -0.31
SSH1-204ENST00000546697 TACSTD2P09758 323 aa13.14□□□□□ -0.31
SSH1-204ENST00000546697 APEX1P27695 318 aaKnown RBP13.14□□□□□ -0.31
SSH1-204ENST00000546697 CDKN2AP42771 156 aaKnown RBP13.14□□□□□ -0.31
SSH1-204ENST00000546697 GUCA1AP43080 201 aaPredicted RBP13.14□□□□□ -0.31
SSH1-204ENST00000546697 HIST1H3AP68431 136 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms