RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 C3orf36Q3SXR2 165 aa13.12□□□□□ -0.31
CD9-210ENST00000543916 FAM27BQ5VT28 67 aa13.12□□□□□ -0.31
CD9-210ENST00000543916 DNM1P34Q6PK57 102 aa13.12□□□□□ -0.31
CD9-210ENST00000543916 UGT2A3Q6UWM9 527 aa13.12□□□□□ -0.31
CD9-210ENST00000543916 ZBTB46Q86UZ6 589 aa13.12□□□□□ -0.31
CD9-210ENST00000543916 GLB1L2Q8IW92 636 aa13.12□□□□□ -0.31
CD9-210ENST00000543916 FBXO17Q96EF6 278 aa13.12□□□□□ -0.31
CD9-210ENST00000543916 MS4A3Q96HJ5 214 aa13.12□□□□□ -0.31
CD9-210ENST00000543916 ZNF416Q9BWM5 594 aa13.12□□□□□ -0.31
CD9-210ENST00000543916 OSBPL10Q9BXB5 764 aa13.12□□□□□ -0.31
CD9-210ENST00000543916 RACGAP1Q9H0H5 632 aa13.12□□□□□ -0.31
CD9-210ENST00000543916 SLC25A19Q9HC21 320 aa13.12□□□□□ -0.31
CD9-210ENST00000543916 MOV10Q9HCE1 1003 aaKnown RBP13.12□□□□□ -0.31
CD9-210ENST00000543916 EMC7Q9NPA0 242 aa13.12□□□□□ -0.31
CD9-210ENST00000543916 CMC2Q9NRP2 79 aa13.12□□□□□ -0.31
CD9-210ENST00000543916 CACNA1DQ01668 2161 aa13.11□□□□□ -0.31
CD9-210ENST00000543916 FAM171A2A8MVW0 826 aa13.11□□□□□ -0.31
CD9-210ENST00000543916 ATP6V1G2-DDX39BF2Z307 99 aa13.11□□□□□ -0.31
CD9-210ENST00000543916 RAB36O95755 333 aa13.11□□□□□ -0.31
CD9-210ENST00000543916 CST2P09228 141 aa13.11□□□□□ -0.31
CD9-210ENST00000543916 GAAP10253 952 aa13.11□□□□□ -0.31
CD9-210ENST00000543916 EPHA2P29317 976 aa13.11□□□□□ -0.31
CD9-210ENST00000543916 CALCRP30988 508 aa13.11□□□□□ -0.31
CD9-210ENST00000543916 PYCR1P32322 319 aa13.11□□□□□ -0.31
CD9-210ENST00000543916 NAAAQ02083 359 aa13.11□□□□□ -0.31
CD9-210ENST00000543916 RAB39AQ14964 217 aa13.11□□□□□ -0.31
CD9-210ENST00000543916 SLC36A2Q495M3 483 aa13.11□□□□□ -0.31
CD9-210ENST00000543916 TMEM53Q6P2H8 277 aa13.11□□□□□ -0.31
CD9-210ENST00000543916 ZNF584Q8IVC4 421 aa13.11□□□□□ -0.31
CD9-210ENST00000543916 OR9Q1Q8NGQ5 310 aa13.11□□□□□ -0.31
CD9-210ENST00000543916 ZNRF4Q8WWF5 429 aa13.11□□□□□ -0.31
CD9-210ENST00000543916 AKAP1Q92667 903 aaKnown RBP eCLIP13.11□□□□□ -0.31
CD9-210ENST00000543916 RBM4Q9BWF3 364 aaKnown RBP13.11□□□□□ -0.31
CD9-210ENST00000543916 NMNAT2Q9BZQ4 307 aa13.11□□□□□ -0.31
CD9-210ENST00000543916 RNF121Q9H920 327 aa13.11□□□□□ -0.31
CD9-210ENST00000543916 UBTD1Q9HAC8 227 aa13.11□□□□□ -0.31
CD9-210ENST00000543916 MOKQ9UQ07 419 aa13.11□□□□□ -0.31
CD9-210ENST00000543916 FKBP7Q9Y680 259 aa13.11□□□□□ -0.31
CD9-210ENST00000543916 FAM183AA6NL82 134 aa13.1□□□□□ -0.31
CD9-210ENST00000543916 RIIAD1A6NNX1 92 aa13.1□□□□□ -0.31
CD9-210ENST00000543916 EI24O14681 340 aa13.1□□□□□ -0.31
CD9-210ENST00000543916 SURF4O15260 269 aa13.1□□□□□ -0.31
CD9-210ENST00000543916 BAG2O95816 211 aa13.1□□□□□ -0.31
CD9-210ENST00000543916 IFNGP01579 166 aa13.1□□□□□ -0.31
CD9-210ENST00000543916 CLUP10909 449 aa13.1□□□□□ -0.31
CD9-210ENST00000543916 ZNF3P17036 446 aa13.1□□□□□ -0.31
CD9-210ENST00000543916 ZNF32P17041 273 aa13.1□□□□□ -0.31
CD9-210ENST00000543916 GUCA1AP43080 201 aaPredicted RBP13.1□□□□□ -0.31
CD9-210ENST00000543916 CENPAP49450 140 aa13.1□□□□□ -0.31
CD9-210ENST00000543916 ESRRGP62508 458 aa13.1□□□□□ -0.31
CD9-210ENST00000543916 DAG1Q14118 895 aa13.1□□□□□ -0.31
CD9-210ENST00000543916 PTGES3Q15185 160 aaKnown RBP13.1□□□□□ -0.31
CD9-210ENST00000543916 MEP1BQ16820 701 aa13.1□□□□□ -0.31
CD9-210ENST00000543916 ZNF672Q499Z4 452 aaPredicted RBP13.1□□□□□ -0.31
CD9-210ENST00000543916 SLC22A25Q6T423 547 aa13.1□□□□□ -0.31
CD9-210ENST00000543916 B3GLCTQ6Y288 498 aa13.1□□□□□ -0.31
CD9-210ENST00000543916 DPPA2Q7Z7J5 298 aa13.1□□□□□ -0.31
CD9-210ENST00000543916 SLC26A10Q8NG04 563 aa13.1□□□□□ -0.31
CD9-210ENST00000543916 C11orf40Q8WZ69 217 aa13.1□□□□□ -0.31
CD9-210ENST00000543916 RBM4BQ9BQ04 359 aaKnown RBP13.1□□□□□ -0.31
CD9-210ENST00000543916 HCAR1Q9BXC0 346 aa13.1□□□□□ -0.31
CD9-210ENST00000543916 KCNN2Q9H2S1 579 aa13.1□□□□□ -0.31
CD9-210ENST00000543916 MED20Q9H944 212 aa13.1□□□□□ -0.31
CD9-210ENST00000543916 CCNB1IP1Q9NPC3 277 aa13.1□□□□□ -0.31
CD9-210ENST00000543916 CSMD2Q7Z408 3487 aa13.09□□□□□ -0.31
CD9-210ENST00000543916 IGHV2OR16-5A0A0B4J2B6 119 aa13.09□□□□□ -0.31
CD9-210ENST00000543916 ZAR1LA6NP61 321 aa13.09□□□□□ -0.31
CD9-210ENST00000543916 HS3ST1O14792 307 aa13.09□□□□□ -0.31
CD9-210ENST00000543916 TFP02787 698 aa13.09□□□□□ -0.31
CD9-210ENST00000543916 SERPINA5P05154 406 aa13.09□□□□□ -0.31
CD9-210ENST00000543916 ALPLP05186 524 aa13.09□□□□□ -0.31
CD9-210ENST00000543916 GYPBP06028 91 aa13.09□□□□□ -0.31
CD9-210ENST00000543916 SPI1P17947 270 aa13.09□□□□□ -0.31
CD9-210ENST00000543916 POLR2IP36954 125 aaKnown RBP13.09□□□□□ -0.31
CD9-210ENST00000543916 SLC25A1P53007 311 aa13.09□□□□□ -0.31
CD9-210ENST00000543916 CDH11P55287 796 aa13.09□□□□□ -0.31
CD9-210ENST00000543916 ELF3P78545 371 aaPredicted RBP13.09□□□□□ -0.31
CD9-210ENST00000543916 RCN1Q15293 331 aa13.09□□□□□ -0.31
CD9-210ENST00000543916 KCNMB1Q16558 191 aa13.09□□□□□ -0.31
CD9-210ENST00000543916 PABPC1L2AQ5JQF8 200 aa13.09□□□□□ -0.31
CD9-210ENST00000543916 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.09□□□□□ -0.31
CD9-210ENST00000543916 CBR4Q8N4T8 237 aa13.09□□□□□ -0.31
CD9-210ENST00000543916 OR51L1Q8NGJ5 315 aa13.09□□□□□ -0.31
CD9-210ENST00000543916 AKR7LQ8NHP1 331 aa13.09□□□□□ -0.31
CD9-210ENST00000543916 RADILQ96JH8 1075 aa13.09□□□□□ -0.31
CD9-210ENST00000543916 GABARAPL3Q9BY60 117 aa13.09□□□□□ -0.31
CD9-210ENST00000543916 WNT5BQ9H1J7 359 aa13.09□□□□□ -0.31
CD9-210ENST00000543916 USE1Q9NZ43 259 aa13.09□□□□□ -0.31
CD9-210ENST00000543916 C12orf71A8MTZ7 269 aa13.08□□□□□ -0.32
CD9-210ENST00000543916 E7EQL1 145 aa13.08□□□□□ -0.32
CD9-210ENST00000543916 CRYAAP02489 173 aa13.08□□□□□ -0.32
CD9-210ENST00000543916 HMGN1P05114 100 aa13.08□□□□□ -0.32
CD9-210ENST00000543916 ANPEPP15144 967 aa13.08□□□□□ -0.32
CD9-210ENST00000543916 LSM6P62312 80 aaKnown RBP13.08□□□□□ -0.32
CD9-210ENST00000543916 PSG4Q00888 419 aa13.08□□□□□ -0.32
CD9-210ENST00000543916 HSF2Q03933 536 aa13.08□□□□□ -0.32
CD9-210ENST00000543916 GLO1Q04760 184 aa13.08□□□□□ -0.32
CD9-210ENST00000543916 SLX4IPQ5VYV7 408 aa13.08□□□□□ -0.32
CD9-210ENST00000543916 LYPD4Q6UWN0 246 aa13.08□□□□□ -0.32
CD9-210ENST00000543916 PAMR1Q6UXH9 720 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms