RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 ZNF546Q86UE3 836 aa12.38□□□□□ -0.43
VPS33A-208ENST00000543633 CCDC36Q8IYA8 594 aa12.38□□□□□ -0.43
VPS33A-208ENST00000543633 BEST3Q8N1M1 668 aa12.38□□□□□ -0.43
VPS33A-208ENST00000543633 OR5T2Q8NGG2 359 aa12.38□□□□□ -0.43
VPS33A-208ENST00000543633 DUSP19Q8WTR2 217 aa12.38□□□□□ -0.43
VPS33A-208ENST00000543633 KTI12Q96EK9 354 aaPredicted RBP12.38□□□□□ -0.43
VPS33A-208ENST00000543633 ZNF285Q96NJ3 590 aa12.38□□□□□ -0.43
VPS33A-208ENST00000543633 ATG5Q9H1Y0 275 aa12.38□□□□□ -0.43
VPS33A-208ENST00000543633 SYT4Q9H2B2 425 aa12.38□□□□□ -0.43
VPS33A-208ENST00000543633 SLC6A15Q9H2J7 730 aa12.38□□□□□ -0.43
VPS33A-208ENST00000543633 ELOVL3Q9HB03 270 aa12.38□□□□□ -0.43
VPS33A-208ENST00000543633 VSX1Q9NZR4 365 aaPredicted RBP12.38□□□□□ -0.43
VPS33A-208ENST00000543633 GPR160Q9UJ42 338 aa12.38□□□□□ -0.43
VPS33A-208ENST00000543633 KCNG2Q9UJ96 466 aa12.38□□□□□ -0.43
VPS33A-208ENST00000543633 GMEB2Q9UKD1 530 aa12.38□□□□□ -0.43
VPS33A-208ENST00000543633 DHDHQ9UQ10 334 aa12.38□□□□□ -0.43
VPS33A-208ENST00000543633 FRG2CA6NGY1 282 aa12.38□□□□□ -0.43
VPS33A-208ENST00000543633 C10orf142B7Z368 130 aa12.38□□□□□ -0.43
VPS33A-208ENST00000543633 H7C1C5 153 aa12.38□□□□□ -0.43
VPS33A-208ENST00000543633 BCL2L11O43521 198 aa12.38□□□□□ -0.43
VPS33A-208ENST00000543633 UTS2O95399 124 aa12.38□□□□□ -0.43
VPS33A-208ENST00000543633 RLN2P04090 185 aa12.38□□□□□ -0.43
VPS33A-208ENST00000543633 HTR2CP28335 458 aa12.38□□□□□ -0.43
VPS33A-208ENST00000543633 CCR4P51679 360 aa12.38□□□□□ -0.43
VPS33A-208ENST00000543633 LCN6P62502 163 aa12.38□□□□□ -0.43
VPS33A-208ENST00000543633 OC90Q02509 493 aaPredicted RBP12.38□□□□□ -0.43
VPS33A-208ENST00000543633 SGCBQ16585 318 aa12.38□□□□□ -0.43
VPS33A-208ENST00000543633 DEFB110Q30KQ9 67 aa12.38□□□□□ -0.43
VPS33A-208ENST00000543633 ARHGAP40Q5TG30 622 aa12.38□□□□□ -0.43
VPS33A-208ENST00000543633 YOD1Q5VVQ6 348 aaPredicted RBP12.38□□□□□ -0.43
VPS33A-208ENST00000543633 LIN54Q6MZP7 749 aa12.38□□□□□ -0.43
VPS33A-208ENST00000543633 MOB3CQ70IA8 216 aa12.38□□□□□ -0.43
VPS33A-208ENST00000543633 STEAP2Q8NFT2 490 aa12.38□□□□□ -0.43
VPS33A-208ENST00000543633 OR1J4Q8NGS1 313 aa12.38□□□□□ -0.43
VPS33A-208ENST00000543633 OR8K3Q8NH51 312 aa12.38□□□□□ -0.43
VPS33A-208ENST00000543633 ZNF519Q8TB69 540 aa12.38□□□□□ -0.43
VPS33A-208ENST00000543633 SLC46A1Q96NT5 459 aa12.38□□□□□ -0.43
VPS33A-208ENST00000543633 SLC38A3Q99624 504 aa12.38□□□□□ -0.43
VPS33A-208ENST00000543633 PRMT8Q9NR22 394 aaPredicted RBP12.38□□□□□ -0.43
VPS33A-208ENST00000543633 TNFSF18Q9UNG2 199 aa12.38□□□□□ -0.43
VPS33A-208ENST00000543633 PLEKHA6Q9Y2H5 1048 aa12.38□□□□□ -0.43
VPS33A-208ENST00000543633 MTCH2Q9Y6C9 303 aa12.38□□□□□ -0.43
VPS33A-208ENST00000543633 CPAMD8Q8IZJ3 1885 aa12.37□□□□□ -0.43
VPS33A-208ENST00000543633 KANTRA0A1W2PQU2 76 aa12.37□□□□□ -0.43
VPS33A-208ENST00000543633 LDLRAD4O15165 306 aa12.37□□□□□ -0.43
VPS33A-208ENST00000543633 SPDEFO95238 335 aa12.37□□□□□ -0.43
VPS33A-208ENST00000543633 CYB5AP00167 134 aa12.37□□□□□ -0.43
VPS33A-208ENST00000543633 PROS1P07225 676 aa12.37□□□□□ -0.43
VPS33A-208ENST00000543633 RAB6AP20340 208 aa12.37□□□□□ -0.43
VPS33A-208ENST00000543633 TACR3P29371 465 aa12.37□□□□□ -0.43
VPS33A-208ENST00000543633 RIDAP52758 137 aaKnown RBP12.37□□□□□ -0.43
VPS33A-208ENST00000543633 PPP1CAP62136 330 aa12.37□□□□□ -0.43
VPS33A-208ENST00000543633 BTG2P78543 158 aa12.37□□□□□ -0.43
VPS33A-208ENST00000543633 HHEXQ03014 270 aa12.37□□□□□ -0.43
VPS33A-208ENST00000543633 MEP1BQ16820 701 aa12.37□□□□□ -0.43
VPS33A-208ENST00000543633 UQCC3Q6UW78 93 aa12.37□□□□□ -0.43
VPS33A-208ENST00000543633 Q6ZSR6 202 aa12.37□□□□□ -0.43
VPS33A-208ENST00000543633 MAMDC2Q7Z304 686 aaPredicted RBP12.37□□□□□ -0.43
VPS33A-208ENST00000543633 CATSPERDQ86XM0 798 aa12.37□□□□□ -0.43
VPS33A-208ENST00000543633 PM20D2Q8IYS1 436 aa12.37□□□□□ -0.43
VPS33A-208ENST00000543633 GATSQ8NAP1 163 aa12.37□□□□□ -0.43
VPS33A-208ENST00000543633 TAAR8Q969N4 342 aa12.37□□□□□ -0.43
VPS33A-208ENST00000543633 MRGPRX1Q96LB2 322 aa12.37□□□□□ -0.43
VPS33A-208ENST00000543633 AMELYQ99218 206 aa12.37□□□□□ -0.43
VPS33A-208ENST00000543633 ULBP3Q9BZM4 244 aa12.37□□□□□ -0.43
VPS33A-208ENST00000543633 B9D1Q9UPM9 204 aa12.37□□□□□ -0.43
VPS33A-208ENST00000543633 A0A1W2PPC1 479 aa12.37□□□□□ -0.43
VPS33A-208ENST00000543633 LOC390937A0A1W2PQ73 354 aa12.37□□□□□ -0.43
VPS33A-208ENST00000543633 A0A1W2PQD3 144 aa12.37□□□□□ -0.43
VPS33A-208ENST00000543633 PRSS37A4D1T9 235 aa12.37□□□□□ -0.43
VPS33A-208ENST00000543633 ZNF735P0CB33 412 aa12.37□□□□□ -0.43
VPS33A-208ENST00000543633 UBE2MP61081 183 aaKnown RBP12.37□□□□□ -0.43
VPS33A-208ENST00000543633 RPL27P61353 136 aaKnown RBP12.37□□□□□ -0.43
VPS33A-208ENST00000543633 VWA2Q5GFL6 755 aa12.37□□□□□ -0.43
VPS33A-208ENST00000543633 ATPAF1Q5TC12 328 aaPredicted RBP12.37□□□□□ -0.43
VPS33A-208ENST00000543633 ASPHD2Q6ICH7 369 aa12.37□□□□□ -0.43
VPS33A-208ENST00000543633 RAB12Q6IQ22 244 aa12.37□□□□□ -0.43
VPS33A-208ENST00000543633 PARM1Q6UWI2 310 aa12.37□□□□□ -0.43
VPS33A-208ENST00000543633 CFAP77Q6ZQR2 320 aa12.37□□□□□ -0.43
VPS33A-208ENST00000543633 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.37□□□□□ -0.43
VPS33A-208ENST00000543633 NKAIN3Q8N8D7 197 aa12.37□□□□□ -0.43
VPS33A-208ENST00000543633 ZDHHC22Q8N966 263 aa12.37□□□□□ -0.43
VPS33A-208ENST00000543633 ZNF563Q8TA94 476 aa12.37□□□□□ -0.43
VPS33A-208ENST00000543633 ASB5Q8WWX0 329 aa12.37□□□□□ -0.43
VPS33A-208ENST00000543633 FGF14Q92915 247 aa12.37□□□□□ -0.43
VPS33A-208ENST00000543633 C8orf44Q96CB5 159 aa12.37□□□□□ -0.43
VPS33A-208ENST00000543633 TCTN2Q96GX1 697 aa12.37□□□□□ -0.43
VPS33A-208ENST00000543633 DMRTA2Q96SC8 542 aa12.37□□□□□ -0.43
VPS33A-208ENST00000543633 CHST6Q9GZX3 395 aa12.37□□□□□ -0.43
VPS33A-208ENST00000543633 BARX1Q9HBU1 254 aaPredicted RBP12.37□□□□□ -0.43
VPS33A-208ENST00000543633 COMMD9Q9P000 198 aa12.37□□□□□ -0.43
VPS33A-208ENST00000543633 FBXL2Q9UKC9 423 aa12.37□□□□□ -0.43
VPS33A-208ENST00000543633 IGLV1-36A0A0B4J1U3 117 aa12.36□□□□□ -0.43
VPS33A-208ENST00000543633 CHURC1-FNTBB4DL54 471 aa12.36□□□□□ -0.43
VPS33A-208ENST00000543633 DISC1C4P0D8 188 aa12.36□□□□□ -0.43
VPS33A-208ENST00000543633 H0YIG0 161 aa12.36□□□□□ -0.43
VPS33A-208ENST00000543633 LGALS8O00214 317 aa12.36□□□□□ -0.43
VPS33A-208ENST00000543633 ABCD4O14678 606 aa12.36□□□□□ -0.43
VPS33A-208ENST00000543633 AMY2AP04746 511 aa12.36□□□□□ -0.43
VPS33A-208ENST00000543633 ACHEP22303 614 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms