RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 GLO1Q04760 184 aa9.25□□□□□ -0.93
VPS33A-204ENST00000540669 SRSF1Q07955 248 aaKnown RBP eCLIP9.25□□□□□ -0.93
VPS33A-204ENST00000540669 APOFQ13790 326 aa9.25□□□□□ -0.93
VPS33A-204ENST00000540669 GABRA6Q16445 453 aa9.25□□□□□ -0.93
VPS33A-204ENST00000540669 FAM27BQ5VT28 67 aa9.25□□□□□ -0.93
VPS33A-204ENST00000540669 CARD17Q5XLA6 110 aa9.25□□□□□ -0.93
VPS33A-204ENST00000540669 STAC2Q6ZMT1 411 aa9.25□□□□□ -0.93
VPS33A-204ENST00000540669 C17orf78Q8N4C9 275 aa9.25□□□□□ -0.93
VPS33A-204ENST00000540669 CNEP1R1Q8N9A8 125 aa9.25□□□□□ -0.93
VPS33A-204ENST00000540669 ZNF610Q8N9Z0 462 aa9.25□□□□□ -0.93
VPS33A-204ENST00000540669 OR1K1Q8NGR3 316 aa9.25□□□□□ -0.93
VPS33A-204ENST00000540669 OR6N1Q8NGY5 312 aa9.25□□□□□ -0.93
VPS33A-204ENST00000540669 LILRB4Q8NHJ6 448 aa9.25□□□□□ -0.93
VPS33A-204ENST00000540669 ITLN2Q8WWU7 325 aaPredicted RBP9.25□□□□□ -0.93
VPS33A-204ENST00000540669 ASB5Q8WWX0 329 aa9.25□□□□□ -0.93
VPS33A-204ENST00000540669 BCL2L2Q92843 193 aaPredicted RBP9.25□□□□□ -0.93
VPS33A-204ENST00000540669 RFKQ969G6 155 aa9.25□□□□□ -0.93
VPS33A-204ENST00000540669 PLEKHA8Q96JA3 519 aa9.25□□□□□ -0.93
VPS33A-204ENST00000540669 Q96MT0 163 aa9.25□□□□□ -0.93
VPS33A-204ENST00000540669 ZNF75AQ96N20 296 aa9.25□□□□□ -0.93
VPS33A-204ENST00000540669 RBP7Q96R05 134 aa9.25□□□□□ -0.93
VPS33A-204ENST00000540669 FOXB1Q99853 325 aa9.25□□□□□ -0.93
VPS33A-204ENST00000540669 OPN3Q9H1Y3 402 aaPredicted RBP9.25□□□□□ -0.93
VPS33A-204ENST00000540669 OR10A4Q9H209 315 aa9.25□□□□□ -0.93
VPS33A-204ENST00000540669 C12orf49Q9H741 205 aa9.25□□□□□ -0.93
VPS33A-204ENST00000540669 FGF20Q9NP95 211 aaPredicted RBP9.25□□□□□ -0.93
VPS33A-204ENST00000540669 B3GAT2Q9NPZ5 323 aa9.25□□□□□ -0.93
VPS33A-204ENST00000540669 TAS2R16Q9NYV7 291 aa9.25□□□□□ -0.93
VPS33A-204ENST00000540669 CNOT2Q9NZN8 540 aaKnown RBP9.25□□□□□ -0.93
VPS33A-204ENST00000540669 PSORS1C1Q9UIG5 152 aa9.25□□□□□ -0.93
VPS33A-204ENST00000540669 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.25□□□□□ -0.93
VPS33A-204ENST00000540669 COA3Q9Y2R0 106 aaPredicted RBP9.25□□□□□ -0.93
VPS33A-204ENST00000540669 LHFPL6Q9Y693 200 aa9.25□□□□□ -0.93
VPS33A-204ENST00000540669 ARPC4-TTLL3A0A0A6YYG9 625 aa9.24□□□□□ -0.93
VPS33A-204ENST00000540669 ZNF503-AS2A6NEH8 195 aa9.24□□□□□ -0.93
VPS33A-204ENST00000540669 GPANK1O95872 356 aa9.24□□□□□ -0.93
VPS33A-204ENST00000540669 IGHV3-9P01782 118 aa9.24□□□□□ -0.93
VPS33A-204ENST00000540669 SBK2P0C263 348 aa9.24□□□□□ -0.93
VPS33A-204ENST00000540669 LAP3P28838 519 aa9.24□□□□□ -0.93
VPS33A-204ENST00000540669 FMO3P31513 532 aa9.24□□□□□ -0.93
VPS33A-204ENST00000540669 MTNR1AP48039 350 aa9.24□□□□□ -0.93
VPS33A-204ENST00000540669 ASCL1P50553 236 aa9.24□□□□□ -0.93
VPS33A-204ENST00000540669 NUDT6P53370 316 aa9.24□□□□□ -0.93
VPS33A-204ENST00000540669 GABARAPL2P60520 117 aa9.24□□□□□ -0.93
VPS33A-204ENST00000540669 RAB40BQ12829 278 aa9.24□□□□□ -0.93
VPS33A-204ENST00000540669 POU4F2Q12837 409 aa9.24□□□□□ -0.93
VPS33A-204ENST00000540669 MED21Q13503 144 aa9.24□□□□□ -0.93
VPS33A-204ENST00000540669 IRF3Q14653 427 aa9.24□□□□□ -0.93
VPS33A-204ENST00000540669 KRTAP27-1Q3LI81 207 aa9.24□□□□□ -0.93
VPS33A-204ENST00000540669 KCTD21Q4G0X4 260 aa9.24□□□□□ -0.93
VPS33A-204ENST00000540669 ZNF684Q5T5D7 378 aa9.24□□□□□ -0.93
VPS33A-204ENST00000540669 LCN1P1Q5VSP4 162 aa9.24□□□□□ -0.93
VPS33A-204ENST00000540669 RNLSQ5VYX0 342 aa9.24□□□□□ -0.93
VPS33A-204ENST00000540669 XKRXQ6PP77 449 aa9.24□□□□□ -0.93
VPS33A-204ENST00000540669 BEND4Q6ZU67 534 aa9.24□□□□□ -0.93
VPS33A-204ENST00000540669 ABHD12BQ7Z5M8 362 aaPredicted RBP9.24□□□□□ -0.93
VPS33A-204ENST00000540669 CDC20BQ86Y33 519 aa9.24□□□□□ -0.93
VPS33A-204ENST00000540669 ZNF100Q8IYN0 542 aa9.24□□□□□ -0.93
VPS33A-204ENST00000540669 ZNF808Q8N4W9 903 aaPredicted RBP9.24□□□□□ -0.93
VPS33A-204ENST00000540669 ZNF485Q8NCK3 441 aa9.24□□□□□ -0.93
VPS33A-204ENST00000540669 PROKR2Q8NFJ6 384 aa9.24□□□□□ -0.93
VPS33A-204ENST00000540669 ST7LQ8TDW4 575 aa9.24□□□□□ -0.93
VPS33A-204ENST00000540669 C11orf40Q8WZ69 217 aa9.24□□□□□ -0.93
VPS33A-204ENST00000540669 LGALS12Q96DT0 336 aa9.24□□□□□ -0.93
VPS33A-204ENST00000540669 CNBD2Q96M20 576 aa9.24□□□□□ -0.93
VPS33A-204ENST00000540669 WACQ9BTA9 647 aa9.24□□□□□ -0.93
VPS33A-204ENST00000540669 SIAEQ9HAT2 523 aa9.24□□□□□ -0.93
VPS33A-204ENST00000540669 PNRC2Q9NPJ4 139 aaKnown RBP9.24□□□□□ -0.93
VPS33A-204ENST00000540669 B3GNT2Q9NY97 397 aa9.24□□□□□ -0.93
VPS33A-204ENST00000540669 CYB5R1Q9UHQ9 305 aa9.24□□□□□ -0.93
VPS33A-204ENST00000540669 DCHS2Q6V1P9 2916 aa9.23□□□□□ -0.93
VPS33A-204ENST00000540669 PTPN13Q12923 2485 aa9.23□□□□□ -0.93
VPS33A-204ENST00000540669 PRR32B1ATL7 298 aa9.23□□□□□ -0.93
VPS33A-204ENST00000540669 XPNPEP2O43895 674 aa9.23□□□□□ -0.93
VPS33A-204ENST00000540669 SELENOFO60613 162 aa9.23□□□□□ -0.93
VPS33A-204ENST00000540669 WNT11O96014 354 aa9.23□□□□□ -0.93
VPS33A-204ENST00000540669 CST2P09228 141 aa9.23□□□□□ -0.93
VPS33A-204ENST00000540669 IGFBP2P18065 325 aa9.23□□□□□ -0.93
VPS33A-204ENST00000540669 NPR2P20594 1047 aa9.23□□□□□ -0.93
VPS33A-204ENST00000540669 MSR1P21757 451 aa9.23□□□□□ -0.93
VPS33A-204ENST00000540669 BMP5P22003 454 aa9.23□□□□□ -0.93
VPS33A-204ENST00000540669 OTX1P32242 354 aaPredicted RBP9.23□□□□□ -0.93
VPS33A-204ENST00000540669 CDAP32320 146 aa9.23□□□□□ -0.93
VPS33A-204ENST00000540669 CSNK2BP67870 215 aa9.23□□□□□ -0.93
VPS33A-204ENST00000540669 ARF1P84077 181 aaKnown RBP9.23□□□□□ -0.93
VPS33A-204ENST00000540669 FAPQ12884 760 aa9.23□□□□□ -0.93
VPS33A-204ENST00000540669 TBRG1Q3YBR2 411 aa9.23□□□□□ -0.93
VPS33A-204ENST00000540669 RBM48Q5RL73 367 aaKnown RBP9.23□□□□□ -0.93
VPS33A-204ENST00000540669 SFRP5Q5T4F7 317 aa9.23□□□□□ -0.93
VPS33A-204ENST00000540669 SLC18B1Q6NT16 456 aa9.23□□□□□ -0.93
VPS33A-204ENST00000540669 ANKRD16Q6P6B7 361 aa9.23□□□□□ -0.93
VPS33A-204ENST00000540669 SYT9Q86SS6 491 aa9.23□□□□□ -0.93
VPS33A-204ENST00000540669 SLC22A24Q8N4F4 322 aa9.23□□□□□ -0.93
VPS33A-204ENST00000540669 ZNF511Q8NB15 262 aa9.23□□□□□ -0.93
VPS33A-204ENST00000540669 OR51L1Q8NGJ5 315 aa9.23□□□□□ -0.93
VPS33A-204ENST00000540669 OR10S1Q8NGN2 331 aa9.23□□□□□ -0.93
VPS33A-204ENST00000540669 OTOSQ8NHW6 89 aa9.23□□□□□ -0.93
VPS33A-204ENST00000540669 CA5BP1Q8WTZ4 195 aa9.23□□□□□ -0.93
VPS33A-204ENST00000540669 SGCDQ92629 289 aa9.23□□□□□ -0.93
VPS33A-204ENST00000540669 ZMYND19Q96E35 227 aaPredicted RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms