RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 PRSS37A4D1T9 235 aa12.29□□□□□ -0.44
BNIP3-202ENST00000540159 TMEM235A6NFC5 223 aa12.29□□□□□ -0.44
BNIP3-202ENST00000540159 CFHR1Q03591 330 aa12.29□□□□□ -0.44
BNIP3-202ENST00000540159 CLPPQ16740 277 aaPredicted RBP12.29□□□□□ -0.44
BNIP3-202ENST00000540159 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.29□□□□□ -0.44
BNIP3-202ENST00000540159 HACD4Q5VWC8 232 aa12.29□□□□□ -0.44
BNIP3-202ENST00000540159 GPR139Q6DWJ6 353 aa12.29□□□□□ -0.44
BNIP3-202ENST00000540159 SIGIRRQ6IA17 410 aa12.29□□□□□ -0.44
BNIP3-202ENST00000540159 OR1J4Q8NGS1 313 aa12.29□□□□□ -0.44
BNIP3-202ENST00000540159 SLC46A1Q96NT5 459 aa12.29□□□□□ -0.44
BNIP3-202ENST00000540159 GPX7Q96SL4 187 aaPredicted RBP12.29□□□□□ -0.44
BNIP3-202ENST00000540159 LRP12Q9Y561 859 aa12.29□□□□□ -0.44
BNIP3-202ENST00000540159 PI4KAP42356 2102 aa12.29□□□□□ -0.44
BNIP3-202ENST00000540159 MYO7BQ6PIF6 2116 aa12.29□□□□□ -0.44
BNIP3-202ENST00000540159 TMEM272A0A1B0GTI8 110 aa12.29□□□□□ -0.44
BNIP3-202ENST00000540159 TCRBV16S1A1N1A0A5B0 115 aa12.29□□□□□ -0.44
BNIP3-202ENST00000540159 TLCD2A6NGC4 264 aa12.29□□□□□ -0.44
BNIP3-202ENST00000540159 CTDSPLO15194 276 aa12.29□□□□□ -0.44
BNIP3-202ENST00000540159 RAB40ALP0C0E4 278 aa12.29□□□□□ -0.44
BNIP3-202ENST00000540159 GNALP38405 381 aa12.29□□□□□ -0.44
BNIP3-202ENST00000540159 MNDAP41218 407 aa12.29□□□□□ -0.44
BNIP3-202ENST00000540159 SORDQ00796 357 aa12.29□□□□□ -0.44
BNIP3-202ENST00000540159 SLC17A1Q14916 467 aa12.29□□□□□ -0.44
BNIP3-202ENST00000540159 COL28A1Q2UY09 1125 aa12.29□□□□□ -0.44
BNIP3-202ENST00000540159 ARSKQ6UWY0 536 aa12.29□□□□□ -0.44
BNIP3-202ENST00000540159 SDR16C5Q8N3Y7 309 aa12.29□□□□□ -0.44
BNIP3-202ENST00000540159 GALNT16Q8N428 558 aa12.29□□□□□ -0.44
BNIP3-202ENST00000540159 RAB40AQ8WXH6 277 aa12.29□□□□□ -0.44
BNIP3-202ENST00000540159 SEC22AQ96IW7 307 aa12.29□□□□□ -0.44
BNIP3-202ENST00000540159 SLC19A3Q9BZV2 496 aa12.29□□□□□ -0.44
BNIP3-202ENST00000540159 VN1R1Q9GZP7 353 aa12.29□□□□□ -0.44
BNIP3-202ENST00000540159 MS4A7Q9GZW8 240 aaPredicted RBP12.29□□□□□ -0.44
BNIP3-202ENST00000540159 MAB21L2Q9Y586 359 aa12.29□□□□□ -0.44
BNIP3-202ENST00000540159 MRPS18BQ9Y676 258 aaKnown RBP12.29□□□□□ -0.44
BNIP3-202ENST00000540159 CACNA1EQ15878 2313 aa12.28□□□□□ -0.44
BNIP3-202ENST00000540159 A0A1B0GUH1 482 aa12.28□□□□□ -0.44
BNIP3-202ENST00000540159 TMEM212A6NML5 194 aa12.28□□□□□ -0.44
BNIP3-202ENST00000540159 P2RY10O00398 339 aa12.28□□□□□ -0.44
BNIP3-202ENST00000540159 ZNF254O75437 659 aa12.28□□□□□ -0.44
BNIP3-202ENST00000540159 BGLAPP02818 100 aa12.28□□□□□ -0.44
BNIP3-202ENST00000540159 IFNGR1P15260 489 aa12.28□□□□□ -0.44
BNIP3-202ENST00000540159 ARHGDIBP52566 201 aa12.28□□□□□ -0.44
BNIP3-202ENST00000540159 SLC25A1P53007 311 aa12.28□□□□□ -0.44
BNIP3-202ENST00000540159 POU3F1Q03052 451 aaPredicted RBP12.28□□□□□ -0.44
BNIP3-202ENST00000540159 IL10RAQ13651 578 aa12.28□□□□□ -0.44
BNIP3-202ENST00000540159 DCXRQ7Z4W1 244 aa12.28□□□□□ -0.44
BNIP3-202ENST00000540159 GKN2Q86XP6 184 aa12.28□□□□□ -0.44
BNIP3-202ENST00000540159 ADGRG3Q86Y34 549 aa12.28□□□□□ -0.44
BNIP3-202ENST00000540159 ZNF440Q8IYI8 595 aa12.28□□□□□ -0.44
BNIP3-202ENST00000540159 RELL2Q8NC24 303 aaPredicted RBP12.28□□□□□ -0.44
BNIP3-202ENST00000540159 HGDQ93099 445 aa12.28□□□□□ -0.44
BNIP3-202ENST00000540159 C7orf50Q9BRJ6 194 aaKnown RBP12.28□□□□□ -0.44
BNIP3-202ENST00000540159 COPS7AQ9UBW8 275 aa12.28□□□□□ -0.44
BNIP3-202ENST00000540159 HRH3Q9Y5N1 445 aa12.28□□□□□ -0.44
BNIP3-202ENST00000540159 TRBV5-5A0A0J9YX44 114 aa12.28□□□□□ -0.44
BNIP3-202ENST00000540159 FAM25EA8MYX2 175 aa12.28□□□□□ -0.44
BNIP3-202ENST00000540159 NDUFB6O95139 128 aa12.28□□□□□ -0.44
BNIP3-202ENST00000540159 FBLP22087 321 aaKnown RBP12.28□□□□□ -0.44
BNIP3-202ENST00000540159 FASLGP48023 281 aa12.28□□□□□ -0.44
BNIP3-202ENST00000540159 RAB11BQ15907 218 aa12.28□□□□□ -0.44
BNIP3-202ENST00000540159 C1orf140Q5VVS0 124 aa12.28□□□□□ -0.44
BNIP3-202ENST00000540159 CARD17Q5XLA6 110 aa12.28□□□□□ -0.44
BNIP3-202ENST00000540159 BAIAP2L2Q6UXY1 529 aa12.28□□□□□ -0.44
BNIP3-202ENST00000540159 MAMDC2Q7Z304 686 aaPredicted RBP12.28□□□□□ -0.44
BNIP3-202ENST00000540159 RNF144BQ7Z419 303 aa12.28□□□□□ -0.44
BNIP3-202ENST00000540159 C8orf44Q96CB5 159 aa12.28□□□□□ -0.44
BNIP3-202ENST00000540159 C5orf34Q96MH7 638 aa12.28□□□□□ -0.44
BNIP3-202ENST00000540159 WWTR1Q9GZV5 400 aa12.28□□□□□ -0.44
BNIP3-202ENST00000540159 C8orf33Q9H7E9 229 aaPredicted RBP12.28□□□□□ -0.44
BNIP3-202ENST00000540159 FSCN3Q9NQT6 498 aa12.28□□□□□ -0.44
BNIP3-202ENST00000540159 NPDC1Q9NQX5 325 aaPredicted RBP12.28□□□□□ -0.44
BNIP3-202ENST00000540159 DIABLOQ9NR28 239 aa12.28□□□□□ -0.44
BNIP3-202ENST00000540159 XRCC3O43542 346 aa12.27□□□□□ -0.44
BNIP3-202ENST00000540159 TGM6O95932 706 aa12.27□□□□□ -0.44
BNIP3-202ENST00000540159 IGKV3-11P04433 115 aa12.27□□□□□ -0.44
BNIP3-202ENST00000540159 AMY2AP04746 511 aa12.27□□□□□ -0.44
BNIP3-202ENST00000540159 CALCBP10092 127 aa12.27□□□□□ -0.44
BNIP3-202ENST00000540159 NFYAP23511 347 aaPredicted RBP12.27□□□□□ -0.44
BNIP3-202ENST00000540159 PRSS3P35030 304 aa12.27□□□□□ -0.44
BNIP3-202ENST00000540159 CAPZA2P47755 286 aa12.27□□□□□ -0.44
BNIP3-202ENST00000540159 RPL27P61353 136 aaKnown RBP12.27□□□□□ -0.44
BNIP3-202ENST00000540159 RSPO4Q2I0M5 234 aaPredicted RBP12.27□□□□□ -0.44
BNIP3-202ENST00000540159 FAM74A1Q5RGS3 127 aa12.27□□□□□ -0.44
BNIP3-202ENST00000540159 GPAT4Q86UL3 456 aa12.27□□□□□ -0.44
BNIP3-202ENST00000540159 COMMD2Q86X83 199 aa12.27□□□□□ -0.44
BNIP3-202ENST00000540159 GVQW1Q8N7I0 195 aa12.27□□□□□ -0.44
BNIP3-202ENST00000540159 CHST4Q8NCG5 386 aa12.27□□□□□ -0.44
BNIP3-202ENST00000540159 OR13C3Q8NGS6 347 aa12.27□□□□□ -0.44
BNIP3-202ENST00000540159 OR8B4Q96RC9 309 aa12.27□□□□□ -0.44
BNIP3-202ENST00000540159 ZNF304Q9HCX3 659 aa12.27□□□□□ -0.44
BNIP3-202ENST00000540159 TRAV36DV7A0A075B6V5 113 aa12.27□□□□□ -0.45
BNIP3-202ENST00000540159 TSPAN4O14817 238 aa12.27□□□□□ -0.45
BNIP3-202ENST00000540159 IGF2P01344 180 aa12.27□□□□□ -0.45
BNIP3-202ENST00000540159 NME1P15531 152 aaKnown RBP12.27□□□□□ -0.45
BNIP3-202ENST00000540159 DNASE1L1P49184 302 aa12.27□□□□□ -0.45
BNIP3-202ENST00000540159 AANATQ16613 207 aa12.27□□□□□ -0.45
BNIP3-202ENST00000540159 ZNF626Q68DY1 528 aa12.27□□□□□ -0.45
BNIP3-202ENST00000540159 TMEM225Q6GV28 225 aa12.27□□□□□ -0.45
BNIP3-202ENST00000540159 OR52W1Q6IF63 320 aa12.27□□□□□ -0.45
BNIP3-202ENST00000540159 SLC18B1Q6NT16 456 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms