RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 C11orf40Q8WZ69 217 aa16.62■□□□□ 0.25
TNFRSF1A-213ENST00000540022 SGCDQ92629 289 aa16.62■□□□□ 0.25
TNFRSF1A-213ENST00000540022 NABP1Q96AH0 204 aa16.62■□□□□ 0.25
TNFRSF1A-213ENST00000540022 PIGMQ9H3S5 423 aa16.62■□□□□ 0.25
TNFRSF1A-213ENST00000540022 WDR76Q9H967 626 aa16.62■□□□□ 0.25
TNFRSF1A-213ENST00000540022 MARCH7Q9H992 704 aa16.62■□□□□ 0.25
TNFRSF1A-213ENST00000540022 ADGRL4Q9HBW9 690 aa16.62■□□□□ 0.25
TNFRSF1A-213ENST00000540022 POLE4Q9NR33 117 aa16.62■□□□□ 0.25
TNFRSF1A-213ENST00000540022 MRPS18AQ9NVS2 196 aaKnown RBP16.62■□□□□ 0.25
TNFRSF1A-213ENST00000540022 TMEM38BQ9NVV0 291 aa16.62■□□□□ 0.25
TNFRSF1A-213ENST00000540022 SCN3BQ9NY72 215 aa16.62■□□□□ 0.25
TNFRSF1A-213ENST00000540022 COMMD3-BMI1R4GMX3 469 aa16.62■□□□□ 0.25
TNFRSF1A-213ENST00000540022 ARHGAP21Q5T5U3 1957 aa16.61■□□□□ 0.25
TNFRSF1A-213ENST00000540022 A8MXE2 369 aa16.61■□□□□ 0.25
TNFRSF1A-213ENST00000540022 SBK2P0C263 348 aa16.61■□□□□ 0.25
TNFRSF1A-213ENST00000540022 NAA10P41227 235 aaPredicted RBP16.61■□□□□ 0.25
TNFRSF1A-213ENST00000540022 CHN2P52757 468 aa16.61■□□□□ 0.25
TNFRSF1A-213ENST00000540022 MRPS34P82930 218 aaKnown RBP16.61■□□□□ 0.25
TNFRSF1A-213ENST00000540022 SGCAQ16586 387 aa16.61■□□□□ 0.25
TNFRSF1A-213ENST00000540022 BEND4Q6ZU67 534 aa16.61■□□□□ 0.25
TNFRSF1A-213ENST00000540022 ERI1Q8IV48 349 aaKnown RBP16.61■□□□□ 0.25
TNFRSF1A-213ENST00000540022 ZNF540Q8NDQ6 660 aa16.61■□□□□ 0.25
TNFRSF1A-213ENST00000540022 OR4F15Q8NGB8 312 aa16.61■□□□□ 0.25
TNFRSF1A-213ENST00000540022 SMAP2Q8WU79 429 aaPredicted RBP16.61■□□□□ 0.25
TNFRSF1A-213ENST00000540022 EMC7Q9NPA0 242 aa16.61■□□□□ 0.25
TNFRSF1A-213ENST00000540022 FKBP14Q9NWM8 211 aa16.61■□□□□ 0.25
TNFRSF1A-213ENST00000540022 PAK1IP1Q9NWT1 392 aaPredicted RBP16.61■□□□□ 0.25
TNFRSF1A-213ENST00000540022 MAST4O15021 2626 aa16.61■□□□□ 0.25
TNFRSF1A-213ENST00000540022 EEF1E1-BLOC1S5C9J1V9 151 aa16.6■□□□□ 0.25
TNFRSF1A-213ENST00000540022 PTGES3LE9PB15 166 aa16.6■□□□□ 0.25
TNFRSF1A-213ENST00000540022 EEF1E1O43324 174 aaKnown RBP16.6■□□□□ 0.25
TNFRSF1A-213ENST00000540022 PSKH1P11801 424 aa16.6■□□□□ 0.25
TNFRSF1A-213ENST00000540022 B4GALT1P15291 398 aa16.6■□□□□ 0.25
TNFRSF1A-213ENST00000540022 RPS27P42677 84 aaKnown RBP16.6■□□□□ 0.25
TNFRSF1A-213ENST00000540022 SLC35A2P78381 396 aa16.6■□□□□ 0.25
TNFRSF1A-213ENST00000540022 AHSA2Q719I0 299 aa16.6■□□□□ 0.25
TNFRSF1A-213ENST00000540022 INTS14Q96SY0 518 aa16.6■□□□□ 0.25
TNFRSF1A-213ENST00000540022 CNN2Q99439 309 aaKnown RBP16.6■□□□□ 0.25
TNFRSF1A-213ENST00000540022 YTHDF1Q9BYJ9 559 aaKnown RBP16.6■□□□□ 0.25
TNFRSF1A-213ENST00000540022 NELFAQ9H3P2 528 aa16.6■□□□□ 0.25
TNFRSF1A-213ENST00000540022 TAS2R16Q9NYV7 291 aa16.6■□□□□ 0.25
TNFRSF1A-213ENST00000540022 JKAMPQ9P055 326 aa16.6■□□□□ 0.25
TNFRSF1A-213ENST00000540022 EXOGQ9Y2C4 368 aaKnown RBP16.6■□□□□ 0.25
TNFRSF1A-213ENST00000540022 MYRFQ9Y2G1 1151 aa16.6■□□□□ 0.25
TNFRSF1A-213ENST00000540022 TPRKBQ9Y3C4 175 aa16.6■□□□□ 0.25
TNFRSF1A-213ENST00000540022 CACNA1DQ01668 2161 aa16.6■□□□□ 0.25
TNFRSF1A-213ENST00000540022 HRGP04196 525 aa16.6■□□□□ 0.25
TNFRSF1A-213ENST00000540022 ADRA2AP08913 450 aa16.6■□□□□ 0.25
TNFRSF1A-213ENST00000540022 COX5AP20674 150 aa16.6■□□□□ 0.25
TNFRSF1A-213ENST00000540022 MSR1P21757 451 aa16.6■□□□□ 0.25
TNFRSF1A-213ENST00000540022 ATP6V1E1P36543 226 aa16.6■□□□□ 0.25
TNFRSF1A-213ENST00000540022 GUCA1AP43080 201 aaPredicted RBP16.6■□□□□ 0.25
TNFRSF1A-213ENST00000540022 HCCSP53701 268 aa16.6■□□□□ 0.25
TNFRSF1A-213ENST00000540022 MVKQ03426 396 aa16.6■□□□□ 0.25
TNFRSF1A-213ENST00000540022 PIGFQ07326 219 aa16.6■□□□□ 0.25
TNFRSF1A-213ENST00000540022 RAB40BQ12829 278 aa16.6■□□□□ 0.25
TNFRSF1A-213ENST00000540022 POU4F2Q12837 409 aa16.6■□□□□ 0.25
TNFRSF1A-213ENST00000540022 CDSNQ15517 529 aa16.6■□□□□ 0.25
TNFRSF1A-213ENST00000540022 KCNMB1Q16558 191 aa16.6■□□□□ 0.25
TNFRSF1A-213ENST00000540022 KLHL22Q53GT1 634 aa16.6■□□□□ 0.25
TNFRSF1A-213ENST00000540022 KLHL24Q6TFL4 600 aa16.6■□□□□ 0.25
TNFRSF1A-213ENST00000540022 ZNF813Q6ZN06 617 aa16.6■□□□□ 0.25
TNFRSF1A-213ENST00000540022 ZNF627Q7L945 461 aa16.6■□□□□ 0.25
TNFRSF1A-213ENST00000540022 MRGPRGQ86SM5 289 aa16.6■□□□□ 0.25
TNFRSF1A-213ENST00000540022 OR52I1Q8NGK6 324 aa16.6■□□□□ 0.25
TNFRSF1A-213ENST00000540022 OR6N2Q8NGY6 317 aa16.6■□□□□ 0.25
TNFRSF1A-213ENST00000540022 DUSP21Q9H596 190 aa16.6■□□□□ 0.25
TNFRSF1A-213ENST00000540022 SIAEQ9HAT2 523 aa16.6■□□□□ 0.25
TNFRSF1A-213ENST00000540022 CNOT2Q9NZN8 540 aaKnown RBP16.6■□□□□ 0.25
TNFRSF1A-213ENST00000540022 PHF3Q92576 2039 aaKnown RBP16.59■□□□□ 0.25
TNFRSF1A-213ENST00000540022 A0A096LPE4 126 aa16.59■□□□□ 0.25
TNFRSF1A-213ENST00000540022 A0A1W2PPZ6 126 aa16.59■□□□□ 0.25
TNFRSF1A-213ENST00000540022 EFCAB10A6NFE3 127 aa16.59■□□□□ 0.25
TNFRSF1A-213ENST00000540022 J3QRE1 110 aa16.59■□□□□ 0.25
TNFRSF1A-213ENST00000540022 ZNF593O00488 134 aaPredicted RBP16.59■□□□□ 0.25
TNFRSF1A-213ENST00000540022 ZG16O60844 167 aa16.59■□□□□ 0.25
TNFRSF1A-213ENST00000540022 LYZL6O75951 148 aa16.59■□□□□ 0.25
TNFRSF1A-213ENST00000540022 PIPP12273 146 aaPredicted RBP16.59■□□□□ 0.25
TNFRSF1A-213ENST00000540022 ZNF823P16415 610 aa16.59■□□□□ 0.25
TNFRSF1A-213ENST00000540022 ADAM8P78325 824 aa16.59■□□□□ 0.25
TNFRSF1A-213ENST00000540022 ST3GAL4Q11206 333 aa16.59■□□□□ 0.25
TNFRSF1A-213ENST00000540022 ENDOGQ14249 297 aaKnown RBP16.59■□□□□ 0.25
TNFRSF1A-213ENST00000540022 TSC22D1Q15714 1073 aa16.59■□□□□ 0.25
TNFRSF1A-213ENST00000540022 FAM27BQ5VT28 67 aa16.59■□□□□ 0.25
TNFRSF1A-213ENST00000540022 SLC16A9Q7RTY1 509 aa16.59■□□□□ 0.25
TNFRSF1A-213ENST00000540022 CXorf67Q86X51 503 aaPredicted RBP16.59■□□□□ 0.25
TNFRSF1A-213ENST00000540022 LRRC18Q8N456 261 aa16.59■□□□□ 0.25
TNFRSF1A-213ENST00000540022 SLC22A24Q8N4F4 322 aa16.59■□□□□ 0.25
TNFRSF1A-213ENST00000540022 ZNF433Q8N7K0 673 aaPredicted RBP16.59■□□□□ 0.25
TNFRSF1A-213ENST00000540022 OR10H5Q8NGA6 315 aa16.59■□□□□ 0.25
TNFRSF1A-213ENST00000540022 OR1K1Q8NGR3 316 aa16.59■□□□□ 0.25
TNFRSF1A-213ENST00000540022 NR1H4Q96RI1 486 aaPredicted RBP16.59■□□□□ 0.25
TNFRSF1A-213ENST00000540022 COPS4Q9BT78 406 aa16.59■□□□□ 0.25
TNFRSF1A-213ENST00000540022 FGF20Q9NP95 211 aaPredicted RBP16.59■□□□□ 0.25
TNFRSF1A-213ENST00000540022 COQ3Q9NZJ6 369 aa16.59■□□□□ 0.25
TNFRSF1A-213ENST00000540022 PLEKHB1Q9UF11 243 aaPredicted RBP16.59■□□□□ 0.25
TNFRSF1A-213ENST00000540022 BLOC1S6Q9UL45 172 aa16.59■□□□□ 0.25
TNFRSF1A-213ENST00000540022 NCOA6Q14686 2063 aaPredicted RBP16.58■□□□□ 0.25
TNFRSF1A-213ENST00000540022 NPR2P20594 1047 aa16.58■□□□□ 0.24
TNFRSF1A-213ENST00000540022 CHRNB4P30926 498 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms