RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 OR1J4Q8NGS1 313 aa18.31■□□□□ 0.52
TMEM260-203ENST00000539559 DCBLD2Q96PD2 775 aa18.31■□□□□ 0.52
TMEM260-203ENST00000539559 PDCD10Q9BUL8 212 aa18.31■□□□□ 0.52
TMEM260-203ENST00000539559 BARX1Q9HBU1 254 aaPredicted RBP18.31■□□□□ 0.52
TMEM260-203ENST00000539559 PCDHB16Q9NRJ7 776 aa18.31■□□□□ 0.52
TMEM260-203ENST00000539559 RASL12Q9NYN1 266 aa18.31■□□□□ 0.52
TMEM260-203ENST00000539559 CDC40O60508 579 aaKnown RBP eCLIP18.31■□□□□ 0.52
TMEM260-203ENST00000539559 SRPX2O60687 465 aaPredicted RBP18.31■□□□□ 0.52
TMEM260-203ENST00000539559 ATPAF1Q5TC12 328 aaPredicted RBP18.31■□□□□ 0.52
TMEM260-203ENST00000539559 SMRP1Q8NCR6 262 aa18.31■□□□□ 0.52
TMEM260-203ENST00000539559 GPX8Q8TED1 209 aa18.31■□□□□ 0.52
TMEM260-203ENST00000539559 TAAR8Q969N4 342 aa18.31■□□□□ 0.52
TMEM260-203ENST00000539559 G6PC3Q9BUM1 346 aa18.31■□□□□ 0.52
TMEM260-203ENST00000539559 OR10A5Q9H207 317 aa18.31■□□□□ 0.52
TMEM260-203ENST00000539559 CPNE7Q9UBL6 633 aa18.31■□□□□ 0.52
TMEM260-203ENST00000539559 NOP16Q9Y3C1 178 aaKnown RBP18.31■□□□□ 0.52
TMEM260-203ENST00000539559 LOC100289279A0A1B0GTE1 492 aa18.3■□□□□ 0.52
TMEM260-203ENST00000539559 HPGDP15428 266 aa18.3■□□□□ 0.52
TMEM260-203ENST00000539559 ISXQ2M1V0 245 aa18.3■□□□□ 0.52
TMEM260-203ENST00000539559 GLYATL3Q5SZD4 288 aa18.3■□□□□ 0.52
TMEM260-203ENST00000539559 JMJD6Q6NYC1 403 aaPredicted RBP18.3■□□□□ 0.52
TMEM260-203ENST00000539559 EIF4E3Q8N5X7 224 aaKnown RBP18.3■□□□□ 0.52
TMEM260-203ENST00000539559 VRK1Q99986 396 aaPredicted RBP18.3■□□□□ 0.52
TMEM260-203ENST00000539559 RTN4RQ9BZR6 473 aa18.3■□□□□ 0.52
TMEM260-203ENST00000539559 TAS2R4Q9NYW5 299 aa18.3■□□□□ 0.52
TMEM260-203ENST00000539559 PCOLCE2Q9UKZ9 415 aa18.3■□□□□ 0.52
TMEM260-203ENST00000539559 LAMA1P25391 3075 aa18.3■□□□□ 0.52
TMEM260-203ENST00000539559 A0A0J9YY10 115 aa18.3■□□□□ 0.52
TMEM260-203ENST00000539559 ASAH2BP0C7U1 165 aa18.3■□□□□ 0.52
TMEM260-203ENST00000539559 MGMTP16455 207 aa18.3■□□□□ 0.52
TMEM260-203ENST00000539559 DHRS2Q13268 280 aa18.3■□□□□ 0.52
TMEM260-203ENST00000539559 CLRN3Q8NCR9 226 aa18.3■□□□□ 0.52
TMEM260-203ENST00000539559 DGAT2Q96PD7 388 aa18.3■□□□□ 0.52
TMEM260-203ENST00000539559 SLC25A32Q9H2D1 315 aa18.3■□□□□ 0.52
TMEM260-203ENST00000539559 PLEKHA6Q9Y2H5 1048 aa18.3■□□□□ 0.52
TMEM260-203ENST00000539559 MRPS18BQ9Y676 258 aaKnown RBP18.3■□□□□ 0.52
TMEM260-203ENST00000539559 PIAS3Q9Y6X2 628 aa18.3■□□□□ 0.52
TMEM260-203ENST00000539559 SPARCP09486 303 aa18.29■□□□□ 0.52
TMEM260-203ENST00000539559 ATP1B3P54709 279 aa18.29■□□□□ 0.52
TMEM260-203ENST00000539559 MPPED2Q15777 294 aa18.29■□□□□ 0.52
TMEM260-203ENST00000539559 KLHL26Q53HC5 615 aa18.29■□□□□ 0.52
TMEM260-203ENST00000539559 LHX6Q9UPM6 363 aa18.29■□□□□ 0.52
TMEM260-203ENST00000539559 TMEM235A6NFC5 223 aa18.29■□□□□ 0.52
TMEM260-203ENST00000539559 SLC17A2O00624 439 aa18.29■□□□□ 0.52
TMEM260-203ENST00000539559 TACR3P29371 465 aa18.29■□□□□ 0.52
TMEM260-203ENST00000539559 GPR3P46089 330 aa18.29■□□□□ 0.52
TMEM260-203ENST00000539559 SLC22A6Q4U2R8 563 aa18.29■□□□□ 0.52
TMEM260-203ENST00000539559 WBP2NLQ6ICG8 309 aa18.29■□□□□ 0.52
TMEM260-203ENST00000539559 UNQ6126/PRO20091Q6UXV3 157 aa18.29■□□□□ 0.52
TMEM260-203ENST00000539559 OR2W3Q7Z3T1 314 aa18.29■□□□□ 0.52
TMEM260-203ENST00000539559 ZNF563Q8TA94 476 aa18.29■□□□□ 0.52
TMEM260-203ENST00000539559 SLC25A36Q96CQ1 311 aa18.29■□□□□ 0.52
TMEM260-203ENST00000539559 CMKLR1Q99788 373 aa18.29■□□□□ 0.52
TMEM260-203ENST00000539559 SLC6A7Q99884 636 aa18.29■□□□□ 0.52
TMEM260-203ENST00000539559 PELOQ9BRX2 385 aaKnown RBP18.29■□□□□ 0.52
TMEM260-203ENST00000539559 B9D1Q9UPM9 204 aa18.29■□□□□ 0.52
TMEM260-203ENST00000539559 FREM3P0C091 2139 aa18.29■□□□□ 0.52
TMEM260-203ENST00000539559 TRIOO75962 3097 aa18.28■□□□□ 0.52
TMEM260-203ENST00000539559 GPR31O00270 319 aa18.28■□□□□ 0.52
TMEM260-203ENST00000539559 LMX1BO60663 402 aa18.28■□□□□ 0.52
TMEM260-203ENST00000539559 HLA-AP01891 365 aaKnown RBP18.28■□□□□ 0.52
TMEM260-203ENST00000539559 DRD1P21728 446 aa18.28■□□□□ 0.52
TMEM260-203ENST00000539559 CAPZA1P52907 286 aa18.28■□□□□ 0.52
TMEM260-203ENST00000539559 SPOCK1Q08629 439 aa18.28■□□□□ 0.52
TMEM260-203ENST00000539559 TOMM34Q15785 309 aaPredicted RBP18.28■□□□□ 0.52
TMEM260-203ENST00000539559 RHOUQ7L0Q8 258 aa18.28■□□□□ 0.52
TMEM260-203ENST00000539559 NKX6-2Q9C056 277 aaPredicted RBP18.28■□□□□ 0.52
TMEM260-203ENST00000539559 HPF1Q9NWY4 346 aa18.28■□□□□ 0.52
TMEM260-203ENST00000539559 CLDN16Q9Y5I7 305 aa18.28■□□□□ 0.52
TMEM260-203ENST00000539559 PCNX3Q9H6A9 2034 aa18.28■□□□□ 0.52
TMEM260-203ENST00000539559 KANTRA0A1W2PQU2 76 aa18.28■□□□□ 0.52
TMEM260-203ENST00000539559 CCDC85CA6NKD9 419 aa18.28■□□□□ 0.52
TMEM260-203ENST00000539559 PMS2P2O95744 297 aa18.28■□□□□ 0.52
TMEM260-203ENST00000539559 RENP00797 406 aa18.28■□□□□ 0.52
TMEM260-203ENST00000539559 UBBP0CG47 229 aa18.28■□□□□ 0.52
TMEM260-203ENST00000539559 UBCP0CG48 685 aaKnown RBP18.28■□□□□ 0.52
TMEM260-203ENST00000539559 CD34P28906 385 aa18.28■□□□□ 0.52
TMEM260-203ENST00000539559 PSMD4P55036 377 aaKnown RBP18.28■□□□□ 0.52
TMEM260-203ENST00000539559 RPS27AP62979 156 aaKnown RBP18.28■□□□□ 0.52
TMEM260-203ENST00000539559 UBA52P62987 128 aaKnown RBP18.28■□□□□ 0.52
TMEM260-203ENST00000539559 C1orf61Q13536 156 aa18.28■□□□□ 0.52
TMEM260-203ENST00000539559 PDSS1Q5T2R2 415 aa18.28■□□□□ 0.52
TMEM260-203ENST00000539559 EEF1A1P5Q5VTE0 462 aa18.28■□□□□ 0.52
TMEM260-203ENST00000539559 C3orf33Q6P1S2 294 aa18.28■□□□□ 0.52
TMEM260-203ENST00000539559 CHRDL2Q6WN34 429 aa18.28■□□□□ 0.52
TMEM260-203ENST00000539559 BPIFB2Q8N4F0 458 aa18.28■□□□□ 0.52
TMEM260-203ENST00000539559 ACBD4Q8NC06 268 aa18.28■□□□□ 0.52
TMEM260-203ENST00000539559 OR10Z1Q8NGY1 313 aa18.28■□□□□ 0.52
TMEM260-203ENST00000539559 FAM174AQ8TBP5 190 aa18.28■□□□□ 0.52
TMEM260-203ENST00000539559 SLC37A2Q8TED4 501 aa18.28■□□□□ 0.52
TMEM260-203ENST00000539559 C1orf198Q9H425 327 aa18.28■□□□□ 0.52
TMEM260-203ENST00000539559 PRTFDC1Q9NRG1 225 aa18.28■□□□□ 0.52
TMEM260-203ENST00000539559 NDUFA2O43678 99 aa18.27■□□□□ 0.52
TMEM260-203ENST00000539559 SLC25A12O75746 678 aa18.27■□□□□ 0.52
TMEM260-203ENST00000539559 TAS2R19P59542 299 aa18.27■□□□□ 0.52
TMEM260-203ENST00000539559 RASGEF1BQ0VAM2 473 aa18.27■□□□□ 0.52
TMEM260-203ENST00000539559 OTOSQ8NHW6 89 aa18.27■□□□□ 0.52
TMEM260-203ENST00000539559 PPP1R1CQ8WVI7 109 aa18.27■□□□□ 0.52
TMEM260-203ENST00000539559 CMBLQ96DG6 245 aa18.27■□□□□ 0.52
TMEM260-203ENST00000539559 KLK13Q9UKR3 277 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms