RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 NDC80O14777 642 aa1.89□□□□□ -2.11
CCDC7-209ENST00000539197 CPLX1O14810 134 aa1.89□□□□□ -2.11
CCDC7-209ENST00000539197 PSTPIP1O43586 416 aa1.89□□□□□ -2.11
CCDC7-209ENST00000539197 AIFM1O95831 613 aa1.89□□□□□ -2.11
CCDC7-209ENST00000539197 CCNE2O96020 404 aa1.89□□□□□ -2.11
CCDC7-209ENST00000539197 APCSP02743 223 aa1.89□□□□□ -2.11
CCDC7-209ENST00000539197 CT62P0C5K7 136 aa1.89□□□□□ -2.11
CCDC7-209ENST00000539197 MAS1LP35410 378 aa1.89□□□□□ -2.11
CCDC7-209ENST00000539197 RFX3P48380 749 aa1.89□□□□□ -2.11
CCDC7-209ENST00000539197 PRRX1P54821 245 aa1.89□□□□□ -2.11
CCDC7-209ENST00000539197 ECH1Q13011 328 aa1.89□□□□□ -2.11
CCDC7-209ENST00000539197 TAF7Q15545 349 aaPredicted RBP1.89□□□□□ -2.11
CCDC7-209ENST00000539197 SNRNP35Q16560 246 aaKnown RBP1.89□□□□□ -2.11
CCDC7-209ENST00000539197 KRTAP13-4Q3LI77 160 aa1.89□□□□□ -2.11
CCDC7-209ENST00000539197 ANKRD22Q5VYY1 191 aa1.89□□□□□ -2.11
CCDC7-209ENST00000539197 PMF1Q6P1K2 205 aa1.89□□□□□ -2.11
CCDC7-209ENST00000539197 CEMP1Q6PRD7 247 aaPredicted RBP1.89□□□□□ -2.11
CCDC7-209ENST00000539197 ASCL5Q7RTU5 278 aa1.89□□□□□ -2.11
CCDC7-209ENST00000539197 ARL6IP6Q8N6S5 226 aa1.89□□□□□ -2.11
CCDC7-209ENST00000539197 LRRC52Q8N7C0 313 aa1.89□□□□□ -2.11
CCDC7-209ENST00000539197 FAM110BQ8TC76 370 aa1.89□□□□□ -2.11
CCDC7-209ENST00000539197 C15orf40Q8WUR7 153 aa1.89□□□□□ -2.11
CCDC7-209ENST00000539197 CNDP1Q96KN2 507 aa1.89□□□□□ -2.11
CCDC7-209ENST00000539197 ZNF681Q96N22 645 aa1.89□□□□□ -2.11
CCDC7-209ENST00000539197 ANKRD19PQ9H560 264 aa1.89□□□□□ -2.11
CCDC7-209ENST00000539197 UBE2ZQ9H832 354 aaPredicted RBP1.89□□□□□ -2.11
CCDC7-209ENST00000539197 ENOPH1Q9UHY7 261 aa1.89□□□□□ -2.11
CCDC7-209ENST00000539197 TMED5Q9Y3A6 229 aa1.89□□□□□ -2.11
CCDC7-209ENST00000539197 PEX16Q9Y5Y5 336 aa1.89□□□□□ -2.11
CCDC7-209ENST00000539197 SHANK1Q9Y566 2161 aa1.89□□□□□ -2.11
CCDC7-209ENST00000539197 PPP1R2P9O14990 202 aa1.88□□□□□ -2.11
CCDC7-209ENST00000539197 ZNF207O43670 478 aaKnown RBP1.88□□□□□ -2.11
CCDC7-209ENST00000539197 CHST1O43916 411 aa1.88□□□□□ -2.11
CCDC7-209ENST00000539197 TIMM8AO60220 97 aaPredicted RBP1.88□□□□□ -2.11
CCDC7-209ENST00000539197 SNNO75324 88 aaPredicted RBP1.88□□□□□ -2.11
CCDC7-209ENST00000539197 TSPAN12O95859 305 aa1.88□□□□□ -2.11
CCDC7-209ENST00000539197 CCNB1P14635 433 aa1.88□□□□□ -2.11
CCDC7-209ENST00000539197 RAB3BP20337 219 aa1.88□□□□□ -2.11
CCDC7-209ENST00000539197 COL8A2P25067 703 aa1.88□□□□□ -2.11
CCDC7-209ENST00000539197 CALRP27797 417 aaKnown RBP1.88□□□□□ -2.11
CCDC7-209ENST00000539197 IFNAR2P48551 515 aa1.88□□□□□ -2.11
CCDC7-209ENST00000539197 TWF1Q12792 350 aa1.88□□□□□ -2.11
CCDC7-209ENST00000539197 SLC39A6Q13433 755 aa1.88□□□□□ -2.11
CCDC7-209ENST00000539197 PTPN20Q4JDL3 420 aa1.88□□□□□ -2.11
CCDC7-209ENST00000539197 UQCC3Q6UW78 93 aa1.88□□□□□ -2.11
CCDC7-209ENST00000539197 PSTKQ8IV42 348 aaKnown RBP1.88□□□□□ -2.11
CCDC7-209ENST00000539197 LILRB4Q8NHJ6 448 aa1.88□□□□□ -2.11
CCDC7-209ENST00000539197 RHEBL1Q8TAI7 183 aa1.88□□□□□ -2.11
CCDC7-209ENST00000539197 LINC01560Q8TB33 94 aa1.88□□□□□ -2.11
CCDC7-209ENST00000539197 CXorf40AQ8TE69 158 aa1.88□□□□□ -2.11
CCDC7-209ENST00000539197 NTAN1Q96AB6 310 aa1.88□□□□□ -2.11
CCDC7-209ENST00000539197 TRIM44Q96DX7 344 aaPredicted RBP1.88□□□□□ -2.11
CCDC7-209ENST00000539197 ERP44Q9BS26 406 aa1.88□□□□□ -2.11
CCDC7-209ENST00000539197 TRMT112Q9UI30 125 aaKnown RBP1.88□□□□□ -2.11
CCDC7-209ENST00000539197 HYOU1Q9Y4L1 999 aa1.88□□□□□ -2.11
CCDC7-209ENST00000539197 H0YCG3 227 aa1.87□□□□□ -2.11
CCDC7-209ENST00000539197 HAS3O00219 553 aa1.87□□□□□ -2.11
CCDC7-209ENST00000539197 YIF1AO95070 293 aa1.87□□□□□ -2.11
CCDC7-209ENST00000539197 IGHDP01880 384 aa1.87□□□□□ -2.11
CCDC7-209ENST00000539197 HLA-DQA1P01909 254 aa1.87□□□□□ -2.11
CCDC7-209ENST00000539197 ZNF806P0C7X5 589 aa1.87□□□□□ -2.11
CCDC7-209ENST00000539197 IL1RNP18510 177 aa1.87□□□□□ -2.11
CCDC7-209ENST00000539197 DCKP27707 260 aa1.87□□□□□ -2.11
CCDC7-209ENST00000539197 IFNA8P32881 189 aa1.87□□□□□ -2.11
CCDC7-209ENST00000539197 AQP2P41181 271 aa1.87□□□□□ -2.11
CCDC7-209ENST00000539197 CXCL12P48061 93 aa1.87□□□□□ -2.11
CCDC7-209ENST00000539197 ARFIP1P53367 373 aa1.87□□□□□ -2.11
CCDC7-209ENST00000539197 ANKDD1AQ495B1 522 aa1.87□□□□□ -2.11
CCDC7-209ENST00000539197 SPIN3Q5JUX0 258 aa1.87□□□□□ -2.11
CCDC7-209ENST00000539197 SAXO2Q658L1 398 aa1.87□□□□□ -2.11
CCDC7-209ENST00000539197 OR2A2Q6IF42 318 aa1.87□□□□□ -2.11
CCDC7-209ENST00000539197 ZFP1Q6P2D0 407 aa1.87□□□□□ -2.11
CCDC7-209ENST00000539197 DNAJC24Q6P3W2 148 aa1.87□□□□□ -2.11
CCDC7-209ENST00000539197 H2BFWTQ7Z2G1 175 aa1.87□□□□□ -2.11
CCDC7-209ENST00000539197 LIX1Q8N485 282 aa1.87□□□□□ -2.11
CCDC7-209ENST00000539197 EID2Q8N6I1 236 aa1.87□□□□□ -2.11
CCDC7-209ENST00000539197 GMCL1P1Q8NEA9 526 aa1.87□□□□□ -2.11
CCDC7-209ENST00000539197 OR1L4Q8NGR5 311 aa1.87□□□□□ -2.11
CCDC7-209ENST00000539197 OR10R2Q8NGX6 335 aa1.87□□□□□ -2.11
CCDC7-209ENST00000539197 OR8U1Q8NH10 309 aa1.87□□□□□ -2.11
CCDC7-209ENST00000539197 PIBF1Q8WXW3 757 aa1.87□□□□□ -2.11
CCDC7-209ENST00000539197 FLYWCH2Q96CP2 140 aaKnown RBP1.87□□□□□ -2.11
CCDC7-209ENST00000539197 NEURL3Q96EH8 262 aa1.87□□□□□ -2.11
CCDC7-209ENST00000539197 HMCN1Q96RW7 5635 aa1.87□□□□□ -2.11
CCDC7-209ENST00000539197 TBL1YQ9BQ87 522 aa1.87□□□□□ -2.11
CCDC7-209ENST00000539197 TIMM29Q9BSF4 260 aa1.87□□□□□ -2.11
CCDC7-209ENST00000539197 SAV1Q9H4B6 383 aaPredicted RBP1.87□□□□□ -2.11
CCDC7-209ENST00000539197 KCNJ16Q9NPI9 418 aa1.87□□□□□ -2.11
CCDC7-209ENST00000539197 FBXO6Q9NRD1 293 aaPredicted RBP1.87□□□□□ -2.11
CCDC7-209ENST00000539197 ADAMTS13Q76LX8 1427 aa1.86□□□□□ -2.11
CCDC7-209ENST00000539197 SNTNA6NMZ2 147 aa1.86□□□□□ -2.11
CCDC7-209ENST00000539197 A8MUU9 505 aa1.86□□□□□ -2.11
CCDC7-209ENST00000539197 BPY2O14599 106 aa1.86□□□□□ -2.11
CCDC7-209ENST00000539197 MTX2O75431 263 aa1.86□□□□□ -2.11
CCDC7-209ENST00000539197 C1orf105O95561 183 aa1.86□□□□□ -2.11
CCDC7-209ENST00000539197 WARSP23381 471 aaKnown RBP1.86□□□□□ -2.11
CCDC7-209ENST00000539197 SSTR5P35346 364 aa1.86□□□□□ -2.11
CCDC7-209ENST00000539197 KIR3DL2P43630 455 aa1.86□□□□□ -2.11
CCDC7-209ENST00000539197 CEBPDP49716 269 aaPredicted RBP1.86□□□□□ -2.11
CCDC7-209ENST00000539197 HNMTP50135 292 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms