RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 SH3GL3Q99963 347 aa20.6■□□□□ 0.89
TMEM260-202ENST00000538838 WDR76Q9H967 626 aa20.6■□□□□ 0.89
TMEM260-202ENST00000538838 UBAP1Q9NZ09 502 aa20.6■□□□□ 0.89
TMEM260-202ENST00000538838 WARS2Q9UGM6 360 aaKnown RBP20.6■□□□□ 0.89
TMEM260-202ENST00000538838 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.6■□□□□ 0.89
TMEM260-202ENST00000538838 SH3D21A4FU49 640 aa20.6■□□□□ 0.89
TMEM260-202ENST00000538838 SELENOFO60613 162 aa20.6■□□□□ 0.89
TMEM260-202ENST00000538838 AGFG2O95081 481 aa20.6■□□□□ 0.89
TMEM260-202ENST00000538838 APOL3O95236 402 aa20.6■□□□□ 0.89
TMEM260-202ENST00000538838 CLDN14O95500 239 aa20.6■□□□□ 0.89
TMEM260-202ENST00000538838 MRPL3P09001 348 aaKnown RBP20.6■□□□□ 0.89
TMEM260-202ENST00000538838 RNF224P0DH78 156 aa20.6■□□□□ 0.89
TMEM260-202ENST00000538838 NPR2P20594 1047 aa20.6■□□□□ 0.89
TMEM260-202ENST00000538838 GUCA1AP43080 201 aaPredicted RBP20.6■□□□□ 0.89
TMEM260-202ENST00000538838 SRSF1Q07955 248 aaKnown RBP eCLIP20.6■□□□□ 0.89
TMEM260-202ENST00000538838 FBXL19-AS1Q494R0 122 aa20.6■□□□□ 0.89
TMEM260-202ENST00000538838 LRRC18Q8N456 261 aa20.6■□□□□ 0.89
TMEM260-202ENST00000538838 BCL2L2Q92843 193 aaPredicted RBP20.6■□□□□ 0.89
TMEM260-202ENST00000538838 SIAEQ9HAT2 523 aa20.6■□□□□ 0.89
TMEM260-202ENST00000538838 KCNJ16Q9NPI9 418 aa20.6■□□□□ 0.89
TMEM260-202ENST00000538838 USP9XQ93008 2570 aaPredicted RBP20.59■□□□□ 0.89
TMEM260-202ENST00000538838 DBTP11182 482 aaKnown RBP20.59■□□□□ 0.89
TMEM260-202ENST00000538838 PSKH1P11801 424 aa20.59■□□□□ 0.89
TMEM260-202ENST00000538838 PSMB1P20618 241 aaKnown RBP20.59■□□□□ 0.89
TMEM260-202ENST00000538838 IL32P24001 234 aa20.59■□□□□ 0.89
TMEM260-202ENST00000538838 NAA10P41227 235 aaPredicted RBP20.59■□□□□ 0.89
TMEM260-202ENST00000538838 BLVRAP53004 296 aa20.59■□□□□ 0.89
TMEM260-202ENST00000538838 MED21Q13503 144 aa20.59■□□□□ 0.89
TMEM260-202ENST00000538838 GGTLC2Q14390 218 aa20.59■□□□□ 0.89
TMEM260-202ENST00000538838 TBRG1Q3YBR2 411 aa20.59■□□□□ 0.89
TMEM260-202ENST00000538838 ERI1Q8IV48 349 aaKnown RBP20.59■□□□□ 0.89
TMEM260-202ENST00000538838 C1orf162Q8NEQ5 155 aaPredicted RBP20.59■□□□□ 0.89
TMEM260-202ENST00000538838 ZNF416Q9BWM5 594 aa20.59■□□□□ 0.89
TMEM260-202ENST00000538838 MARCH7Q9H992 704 aa20.59■□□□□ 0.89
TMEM260-202ENST00000538838 SNTNA6NMZ2 147 aa20.58■□□□□ 0.89
TMEM260-202ENST00000538838 OR8G3PP0DMU2 310 aa20.58■□□□□ 0.89
TMEM260-202ENST00000538838 GRNP28799 593 aaKnown RBP20.58■□□□□ 0.89
TMEM260-202ENST00000538838 RPS27P42677 84 aaKnown RBP20.58■□□□□ 0.89
TMEM260-202ENST00000538838 MTNR1AP48039 350 aa20.58■□□□□ 0.89
TMEM260-202ENST00000538838 ADAM8P78325 824 aa20.58■□□□□ 0.89
TMEM260-202ENST00000538838 ENDOGQ14249 297 aaKnown RBP20.58■□□□□ 0.89
TMEM260-202ENST00000538838 KCNMB1Q16558 191 aa20.58■□□□□ 0.89
TMEM260-202ENST00000538838 NRN1LQ496H8 165 aa20.58■□□□□ 0.89
TMEM260-202ENST00000538838 C6orf141Q5SZD1 244 aa20.58■□□□□ 0.89
TMEM260-202ENST00000538838 SHFQ7M4L6 423 aa20.58■□□□□ 0.89
TMEM260-202ENST00000538838 SKA3Q8IX90 412 aa20.58■□□□□ 0.89
TMEM260-202ENST00000538838 TIGD4Q8IY51 512 aa20.58■□□□□ 0.89
TMEM260-202ENST00000538838 OR10H5Q8NGA6 315 aa20.58■□□□□ 0.89
TMEM260-202ENST00000538838 OR51G2Q8NGK0 314 aa20.58■□□□□ 0.89
TMEM260-202ENST00000538838 RNFT2Q96EX2 444 aa20.58■□□□□ 0.89
TMEM260-202ENST00000538838 INTS14Q96SY0 518 aa20.58■□□□□ 0.89
TMEM260-202ENST00000538838 RHNO1Q9BSD3 238 aa20.58■□□□□ 0.89
TMEM260-202ENST00000538838 ADGRL4Q9HBW9 690 aa20.58■□□□□ 0.89
TMEM260-202ENST00000538838 XPNPEP2O43895 674 aa20.57■□□□□ 0.88
TMEM260-202ENST00000538838 HRGP04196 525 aa20.57■□□□□ 0.88
TMEM260-202ENST00000538838 UGT2B10P36537 528 aa20.57■□□□□ 0.88
TMEM260-202ENST00000538838 TUBA1BP68363 451 aa20.57■□□□□ 0.88
TMEM260-202ENST00000538838 TUBA4AP68366 448 aa20.57■□□□□ 0.88
TMEM260-202ENST00000538838 FAM27BQ5VT28 67 aa20.57■□□□□ 0.88
TMEM260-202ENST00000538838 TUBA1AQ71U36 451 aa20.57■□□□□ 0.88
TMEM260-202ENST00000538838 BPIFB6Q8NFQ5 453 aa20.57■□□□□ 0.88
TMEM260-202ENST00000538838 OR6N2Q8NGY6 317 aa20.57■□□□□ 0.88
TMEM260-202ENST00000538838 SMAP2Q8WU79 429 aaPredicted RBP20.57■□□□□ 0.88
TMEM260-202ENST00000538838 RNASE6Q93091 150 aaKnown RBP20.57■□□□□ 0.88
TMEM260-202ENST00000538838 S100PBPQ96BU1 408 aa20.57■□□□□ 0.88
TMEM260-202ENST00000538838 CNN2Q99439 309 aaKnown RBP20.57■□□□□ 0.88
TMEM260-202ENST00000538838 HAO2Q9NYQ3 351 aa20.57■□□□□ 0.88
TMEM260-202ENST00000538838 ZNF224Q9NZL3 707 aa20.57■□□□□ 0.88
TMEM260-202ENST00000538838 POLR1DQ9Y2S0 133 aa20.57■□□□□ 0.88
TMEM260-202ENST00000538838 TENM4Q6N022 2769 aa20.57■□□□□ 0.88
TMEM260-202ENST00000538838 A0A1W2PR80 420 aa20.56■□□□□ 0.88
TMEM260-202ENST00000538838 ZNF503-AS2A6NEH8 195 aa20.56■□□□□ 0.88
TMEM260-202ENST00000538838 FARS2O95363 451 aaKnown RBP20.56■□□□□ 0.88
TMEM260-202ENST00000538838 ENTPD1P49961 510 aa20.56■□□□□ 0.88
TMEM260-202ENST00000538838 TFF3Q07654 80 aa20.56■□□□□ 0.88
TMEM260-202ENST00000538838 TMED1Q13445 227 aa20.56■□□□□ 0.88
TMEM260-202ENST00000538838 OR7E24Q6IFN5 339 aa20.56■□□□□ 0.88
TMEM260-202ENST00000538838 LINC00346Q8IVM7 164 aa20.56■□□□□ 0.88
TMEM260-202ENST00000538838 FGFBP3Q8TAT2 258 aa20.56■□□□□ 0.88
TMEM260-202ENST00000538838 ACTR6Q9GZN1 396 aa20.56■□□□□ 0.88
TMEM260-202ENST00000538838 RPL36Q9Y3U8 105 aaKnown RBP20.56■□□□□ 0.88
TMEM260-202ENST00000538838 C16orf97H3BN30 126 aa20.56■□□□□ 0.88
TMEM260-202ENST00000538838 SLC1A7O00341 560 aa20.56■□□□□ 0.88
TMEM260-202ENST00000538838 FAM20BO75063 409 aa20.56■□□□□ 0.88
TMEM260-202ENST00000538838 SPARCP09486 303 aa20.56■□□□□ 0.88
TMEM260-202ENST00000538838 PATE4P0C8F1 98 aa20.56■□□□□ 0.88
TMEM260-202ENST00000538838 ZNF823P16415 610 aa20.56■□□□□ 0.88
TMEM260-202ENST00000538838 CAPZA2P47755 286 aa20.56■□□□□ 0.88
TMEM260-202ENST00000538838 SLC16A14Q7RTX9 510 aa20.56■□□□□ 0.88
TMEM260-202ENST00000538838 ZNF786Q8N393 782 aa20.56■□□□□ 0.88
TMEM260-202ENST00000538838 FBXO17Q96EF6 278 aa20.56■□□□□ 0.88
TMEM260-202ENST00000538838 HDHD5Q9BXW7 423 aa20.56■□□□□ 0.88
TMEM260-202ENST00000538838 SLC17A5Q9NRA2 495 aa20.56■□□□□ 0.88
TMEM260-202ENST00000538838 LHFPL6Q9Y693 200 aa20.56■□□□□ 0.88
TMEM260-202ENST00000538838 ZNF593O00488 134 aaPredicted RBP20.55■□□□□ 0.88
TMEM260-202ENST00000538838 HLA-HP01893 362 aa20.55■□□□□ 0.88
TMEM260-202ENST00000538838 CST2P09228 141 aa20.55■□□□□ 0.88
TMEM260-202ENST00000538838 SBK2P0C263 348 aa20.55■□□□□ 0.88
TMEM260-202ENST00000538838 LSM6P62312 80 aaKnown RBP20.55■□□□□ 0.88
TMEM260-202ENST00000538838 CORO6Q6QEF8 472 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms