RNA–Protein interactions for RNA: ENST00000538039.5

CLPB-209, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLPB, Length 3,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-209ENST00000538039 FAM122CQ6P4D5 195 aa12.68□□□□□ -0.38
CLPB-209ENST00000538039 ZNF627Q7L945 461 aa12.68□□□□□ -0.38
CLPB-209ENST00000538039 OR6K3Q8NGY3 331 aa12.68□□□□□ -0.38
CLPB-209ENST00000538039 ZNF417Q8TAU3 575 aa12.68□□□□□ -0.38
CLPB-209ENST00000538039 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.68□□□□□ -0.38
CLPB-209ENST00000538039 ST8SIA2Q92186 375 aa12.68□□□□□ -0.38
CLPB-209ENST00000538039 DGAT2Q96PD7 388 aa12.68□□□□□ -0.38
CLPB-209ENST00000538039 INTS14Q96SY0 518 aa12.68□□□□□ -0.38
CLPB-209ENST00000538039 ADOQ96SZ5 270 aa12.68□□□□□ -0.38
CLPB-209ENST00000538039 SLC38A3Q99624 504 aa12.68□□□□□ -0.38
CLPB-209ENST00000538039 MAP3K3Q99759 626 aa12.68□□□□□ -0.38
CLPB-209ENST00000538039 ADAT1Q9BUB4 502 aaKnown RBP12.68□□□□□ -0.38
CLPB-209ENST00000538039 GMEB2Q9UKD1 530 aa12.68□□□□□ -0.38
CLPB-209ENST00000538039 PRAMEF2O60811 474 aa12.68□□□□□ -0.38
CLPB-209ENST00000538039 TSPAN9O75954 239 aa12.68□□□□□ -0.38
CLPB-209ENST00000538039 HOXC4P09017 264 aaPredicted RBP12.68□□□□□ -0.38
CLPB-209ENST00000538039 CSF1P09603 554 aa12.68□□□□□ -0.38
CLPB-209ENST00000538039 HLA-DOBP13765 273 aa12.68□□□□□ -0.38
CLPB-209ENST00000538039 CTLA4P16410 223 aa12.68□□□□□ -0.38
CLPB-209ENST00000538039 IGLV3-21P80748 117 aaPredicted RBP12.68□□□□□ -0.38
CLPB-209ENST00000538039 EIF2B5Q13144 721 aaKnown RBP12.68□□□□□ -0.38
CLPB-209ENST00000538039 ELP2Q6IA86 826 aa12.68□□□□□ -0.38
CLPB-209ENST00000538039 JMJD6Q6NYC1 403 aaPredicted RBP12.68□□□□□ -0.38
CLPB-209ENST00000538039 PDZD9Q8IXQ8 264 aa12.68□□□□□ -0.38
CLPB-209ENST00000538039 GVQW1Q8N7I0 195 aa12.68□□□□□ -0.38
CLPB-209ENST00000538039 PTPMT1Q8WUK0 201 aaPredicted RBP12.68□□□□□ -0.38
CLPB-209ENST00000538039 ASB5Q8WWX0 329 aa12.68□□□□□ -0.38
CLPB-209ENST00000538039 LIPHQ8WWY8 451 aa12.68□□□□□ -0.38
CLPB-209ENST00000538039 SLC25A36Q96CQ1 311 aa12.68□□□□□ -0.38
CLPB-209ENST00000538039 G6PC3Q9BUM1 346 aa12.68□□□□□ -0.38
CLPB-209ENST00000538039 PFDN2Q9UHV9 154 aa12.68□□□□□ -0.38
CLPB-209ENST00000538039 TMEM212A6NML5 194 aa12.68□□□□□ -0.38
CLPB-209ENST00000538039 HNRNPA2B1P22626 353 aaKnown RBP12.68□□□□□ -0.38
CLPB-209ENST00000538039 ANOS1P23352 680 aa12.68□□□□□ -0.38
CLPB-209ENST00000538039 MAPK3P27361 379 aaPredicted RBP12.68□□□□□ -0.38
CLPB-209ENST00000538039 ZNF117Q03924 483 aa12.68□□□□□ -0.38
CLPB-209ENST00000538039 SLC17A1Q14916 467 aa12.68□□□□□ -0.38
CLPB-209ENST00000538039 TMEM225Q6GV28 225 aa12.68□□□□□ -0.38
CLPB-209ENST00000538039 ZNF546Q86UE3 836 aa12.68□□□□□ -0.38
CLPB-209ENST00000538039 CD163Q86VB7 1156 aa12.68□□□□□ -0.38
CLPB-209ENST00000538039 NAXDQ8IW45 347 aa12.68□□□□□ -0.38
CLPB-209ENST00000538039 GPBAR1Q8TDU6 330 aa12.68□□□□□ -0.38
CLPB-209ENST00000538039 SEMA6CQ9H3T2 930 aa12.68□□□□□ -0.38
CLPB-209ENST00000538039 VSIG4Q9Y279 399 aa12.68□□□□□ -0.38
CLPB-209ENST00000538039 PHF3Q92576 2039 aaKnown RBP12.67□□□□□ -0.38
CLPB-209ENST00000538039 A0A1W2PPC1 479 aa12.67□□□□□ -0.38
CLPB-209ENST00000538039 TMEM235A6NFC5 223 aa12.67□□□□□ -0.38
CLPB-209ENST00000538039 RFPL4AA6NLU0 287 aa12.67□□□□□ -0.38
CLPB-209ENST00000538039 KRBOX1C9JBD0 128 aa12.67□□□□□ -0.38
CLPB-209ENST00000538039 RFPL4AL1F8VTS6 287 aa12.67□□□□□ -0.38
CLPB-209ENST00000538039 SLC17A2O00624 439 aa12.67□□□□□ -0.38
CLPB-209ENST00000538039 ICOSLGO75144 302 aa12.67□□□□□ -0.38
CLPB-209ENST00000538039 UTS2O95399 124 aa12.67□□□□□ -0.38
CLPB-209ENST00000538039 HLA-DQA2P01906 255 aa12.67□□□□□ -0.38
CLPB-209ENST00000538039 GLULP15104 373 aa12.67□□□□□ -0.38
CLPB-209ENST00000538039 RPA2P15927 270 aa12.67□□□□□ -0.38
CLPB-209ENST00000538039 SPOCK1Q08629 439 aa12.67□□□□□ -0.38
CLPB-209ENST00000538039 HSD17B13Q7Z5P4 300 aaPredicted RBP12.67□□□□□ -0.38
CLPB-209ENST00000538039 BPIFCQ8NFQ6 507 aa12.67□□□□□ -0.38
CLPB-209ENST00000538039 OR10K1Q8NGX5 313 aa12.67□□□□□ -0.38
CLPB-209ENST00000538039 C8orf44Q96CB5 159 aa12.67□□□□□ -0.38
CLPB-209ENST00000538039 MMABQ96EY8 250 aaPredicted RBP12.67□□□□□ -0.38
CLPB-209ENST00000538039 DPYSL5Q9BPU6 564 aa12.67□□□□□ -0.38
CLPB-209ENST00000538039 EPHA6Q9UF33 1036 aa12.67□□□□□ -0.38
CLPB-209ENST00000538039 SLC5A6Q9Y289 635 aa12.67□□□□□ -0.38
CLPB-209ENST00000538039 YBX2Q9Y2T7 364 aaKnown RBP12.67□□□□□ -0.38
CLPB-209ENST00000538039 HRH3Q9Y5N1 445 aa12.67□□□□□ -0.38
CLPB-209ENST00000538039 LOC100289279A0A1B0GTE1 492 aa12.67□□□□□ -0.38
CLPB-209ENST00000538039 RNF222A6NCQ9 220 aa12.67□□□□□ -0.38
CLPB-209ENST00000538039 RNH1P13489 461 aaKnown RBP12.67□□□□□ -0.38
CLPB-209ENST00000538039 LUMP51884 338 aaPredicted RBP12.67□□□□□ -0.38
CLPB-209ENST00000538039 DHRS2Q13268 280 aa12.67□□□□□ -0.38
CLPB-209ENST00000538039 RAB11BQ15907 218 aa12.67□□□□□ -0.38
CLPB-209ENST00000538039 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.67□□□□□ -0.38
CLPB-209ENST00000538039 OR52W1Q6IF63 320 aa12.67□□□□□ -0.38
CLPB-209ENST00000538039 STEAP2Q8NFT2 490 aa12.67□□□□□ -0.38
CLPB-209ENST00000538039 HERVK_113Q902F9 699 aa12.67□□□□□ -0.38
CLPB-209ENST00000538039 OR8B4Q96RC9 309 aa12.67□□□□□ -0.38
CLPB-209ENST00000538039 MESP1Q9BRJ9 268 aa12.67□□□□□ -0.38
CLPB-209ENST00000538039 SLC19A3Q9BZV2 496 aa12.67□□□□□ -0.38
CLPB-209ENST00000538039 COMMD4Q9H0A8 199 aa12.67□□□□□ -0.38
CLPB-209ENST00000538039 MSRAQ9UJ68 235 aa12.67□□□□□ -0.38
CLPB-209ENST00000538039 FBXO9Q9UK97 447 aaPredicted RBP12.67□□□□□ -0.38
CLPB-209ENST00000538039 CPAMD8Q8IZJ3 1885 aa12.67□□□□□ -0.38
CLPB-209ENST00000538039 TMEM82A0PJX8 343 aa12.66□□□□□ -0.38
CLPB-209ENST00000538039 AMY2AP04746 511 aa12.66□□□□□ -0.38
CLPB-209ENST00000538039 APEHP13798 732 aaKnown RBP12.66□□□□□ -0.38
CLPB-209ENST00000538039 TNFRSF4P43489 277 aa12.66□□□□□ -0.38
CLPB-209ENST00000538039 ATP1B3P54709 279 aa12.66□□□□□ -0.38
CLPB-209ENST00000538039 SRSF3P84103 164 aaKnown RBP12.66□□□□□ -0.38
CLPB-209ENST00000538039 C19orf47Q8N9M1 422 aaKnown RBP12.66□□□□□ -0.38
CLPB-209ENST00000538039 TSLPQ969D9 159 aa12.66□□□□□ -0.38
CLPB-209ENST00000538039 SLC41A2Q96JW4 573 aa12.66□□□□□ -0.38
CLPB-209ENST00000538039 AIFM2Q9BRQ8 373 aa12.66□□□□□ -0.38
CLPB-209ENST00000538039 TMEM185BQ9H7F4 350 aa12.66□□□□□ -0.38
CLPB-209ENST00000538039 FN3KRPQ9HA64 309 aa12.66□□□□□ -0.38
CLPB-209ENST00000538039 MED11Q9P086 117 aa12.66□□□□□ -0.38
CLPB-209ENST00000538039 TMED7Q9Y3B3 224 aa12.66□□□□□ -0.38
CLPB-209ENST00000538039 RHBDD3Q9Y3P4 386 aa12.66□□□□□ -0.38
CLPB-209ENST00000538039 OR5H14A6NHG9 310 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms