RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 A0A1W2PPH5 198 aa12.68□□□□□ -0.38
LIG1-203ENST00000536218 CDHR4A6H8M9 788 aa12.68□□□□□ -0.38
LIG1-203ENST00000536218 SFTA3P0C7M3 94 aa12.68□□□□□ -0.38
LIG1-203ENST00000536218 SMIM10L1P0DMW3 83 aa12.68□□□□□ -0.38
LIG1-203ENST00000536218 ZNF10P21506 573 aaPredicted RBP12.68□□□□□ -0.38
LIG1-203ENST00000536218 MNDAP41218 407 aa12.68□□□□□ -0.38
LIG1-203ENST00000536218 RBP2P50120 134 aa12.68□□□□□ -0.38
LIG1-203ENST00000536218 OLFML2AQ68BL7 652 aa12.68□□□□□ -0.38
LIG1-203ENST00000536218 PXKQ7Z7A4 578 aa12.68□□□□□ -0.38
LIG1-203ENST00000536218 METTL27Q8N6F8 245 aaPredicted RBP12.68□□□□□ -0.38
LIG1-203ENST00000536218 OR4C16Q8NGL9 310 aa12.68□□□□□ -0.38
LIG1-203ENST00000536218 RELTQ969Z4 430 aa12.68□□□□□ -0.38
LIG1-203ENST00000536218 SMIM10Q96HG1 83 aa12.68□□□□□ -0.38
LIG1-203ENST00000536218 SEMA4GQ9NTN9 838 aa12.68□□□□□ -0.38
LIG1-203ENST00000536218 TMEM72A0PK05 275 aa12.68□□□□□ -0.38
LIG1-203ENST00000536218 LIPCP11150 499 aa12.68□□□□□ -0.38
LIG1-203ENST00000536218 CDK2P24941 298 aa12.68□□□□□ -0.38
LIG1-203ENST00000536218 G0S2P27469 103 aa12.68□□□□□ -0.38
LIG1-203ENST00000536218 STARD6P59095 220 aa12.68□□□□□ -0.38
LIG1-203ENST00000536218 TSPAN31Q12999 210 aa12.68□□□□□ -0.38
LIG1-203ENST00000536218 ERV3-1Q14264 604 aa12.68□□□□□ -0.38
LIG1-203ENST00000536218 TP53I3Q53FA7 332 aa12.68□□□□□ -0.38
LIG1-203ENST00000536218 YOD1Q5VVQ6 348 aaPredicted RBP12.68□□□□□ -0.38
LIG1-203ENST00000536218 OR10K2Q6IF99 312 aa12.68□□□□□ -0.38
LIG1-203ENST00000536218 OSTF1Q92882 214 aa12.68□□□□□ -0.38
LIG1-203ENST00000536218 DVL3Q92997 716 aaPredicted RBP12.68□□□□□ -0.38
LIG1-203ENST00000536218 PRRC1Q96M27 445 aa12.68□□□□□ -0.38
LIG1-203ENST00000536218 NRIP2Q9BQI9 281 aa12.68□□□□□ -0.38
LIG1-203ENST00000536218 C20orf24Q9BUV8 137 aa12.68□□□□□ -0.38
LIG1-203ENST00000536218 HCAR1Q9BXC0 346 aa12.68□□□□□ -0.38
LIG1-203ENST00000536218 GGT3PA6NGU5 568 aa12.67□□□□□ -0.38
LIG1-203ENST00000536218 ACOT7O00154 380 aa12.67□□□□□ -0.38
LIG1-203ENST00000536218 MBTPS2O43462 519 aa12.67□□□□□ -0.38
LIG1-203ENST00000536218 ARL6IP5O75915 188 aa12.67□□□□□ -0.38
LIG1-203ENST00000536218 COX5BP10606 129 aa12.67□□□□□ -0.38
LIG1-203ENST00000536218 AGAP20933 346 aa12.67□□□□□ -0.38
LIG1-203ENST00000536218 FAUP35544 74 aaKnown RBP12.67□□□□□ -0.38
LIG1-203ENST00000536218 MAGEB1P43366 347 aa12.67□□□□□ -0.38
LIG1-203ENST00000536218 PLA2G7Q13093 441 aa12.67□□□□□ -0.38
LIG1-203ENST00000536218 C10orf91Q5T1B1 145 aa12.67□□□□□ -0.38
LIG1-203ENST00000536218 FAM199XQ6PEV8 388 aaPredicted RBP12.67□□□□□ -0.38
LIG1-203ENST00000536218 CLEC9AQ6UXN8 241 aa12.67□□□□□ -0.38
LIG1-203ENST00000536218 PIGXQ8TBF5 258 aa12.67□□□□□ -0.38
LIG1-203ENST00000536218 CPNE4Q96A23 557 aaPredicted RBP12.67□□□□□ -0.38
LIG1-203ENST00000536218 KLHL28Q9NXS3 571 aa12.67□□□□□ -0.38
LIG1-203ENST00000536218 SPACA6W5XKT8 324 aa12.67□□□□□ -0.38
LIG1-203ENST00000536218 LOC100509620A0A075B734 347 aa12.67□□□□□ -0.38
LIG1-203ENST00000536218 KIR2DS5A0A0G2JLQ3 304 aa12.67□□□□□ -0.38
LIG1-203ENST00000536218 A0A0G2JNG1 304 aa12.67□□□□□ -0.38
LIG1-203ENST00000536218 A0A1W2PPC4 97 aa12.67□□□□□ -0.38
LIG1-203ENST00000536218 KIR2DS3K7RE56 304 aa12.67□□□□□ -0.38
LIG1-203ENST00000536218 OR2F2O95006 317 aa12.67□□□□□ -0.38
LIG1-203ENST00000536218 AQP2P41181 271 aa12.67□□□□□ -0.38
LIG1-203ENST00000536218 RAB5CP51148 216 aa12.67□□□□□ -0.38
LIG1-203ENST00000536218 OR2F1Q13607 317 aa12.67□□□□□ -0.38
LIG1-203ENST00000536218 KIR2DS5Q14953 304 aa12.67□□□□□ -0.38
LIG1-203ENST00000536218 LINC00471Q8N535 108 aa12.67□□□□□ -0.38
LIG1-203ENST00000536218 INO80EQ8NBZ0 244 aaPredicted RBP12.67□□□□□ -0.38
LIG1-203ENST00000536218 PHYHIPLQ96FC7 376 aa12.67□□□□□ -0.38
LIG1-203ENST00000536218 MCHR1Q99705 422 aa12.67□□□□□ -0.38
LIG1-203ENST00000536218 LRRC61Q9BV99 259 aa12.67□□□□□ -0.38
LIG1-203ENST00000536218 FKRPQ9H9S5 495 aa12.67□□□□□ -0.38
LIG1-203ENST00000536218 RCC2Q9P258 522 aaKnown RBP12.67□□□□□ -0.38
LIG1-203ENST00000536218 WASF3Q9UPY6 502 aa12.67□□□□□ -0.38
LIG1-203ENST00000536218 LOC390937A0A1W2PQ73 354 aa12.67□□□□□ -0.38
LIG1-203ENST00000536218 DUXAA6NLW8 204 aa12.67□□□□□ -0.38
LIG1-203ENST00000536218 MT-ND4LP03901 98 aa12.67□□□□□ -0.38
LIG1-203ENST00000536218 CT62P0C5K7 136 aa12.67□□□□□ -0.38
LIG1-203ENST00000536218 AIMP2Q13155 320 aaKnown RBP12.67□□□□□ -0.38
LIG1-203ENST00000536218 TRAM1Q15629 374 aa12.67□□□□□ -0.38
LIG1-203ENST00000536218 NKAPLQ5M9Q1 402 aa12.67□□□□□ -0.38
LIG1-203ENST00000536218 LIN54Q6MZP7 749 aa12.67□□□□□ -0.38
LIG1-203ENST00000536218 FRRS1Q6ZNA5 592 aa12.67□□□□□ -0.38
LIG1-203ENST00000536218 SLC43A2Q8N370 569 aa12.67□□□□□ -0.38
LIG1-203ENST00000536218 CCDC54Q8NEL0 328 aa12.67□□□□□ -0.38
LIG1-203ENST00000536218 OR2T33Q8NG76 320 aa12.67□□□□□ -0.38
LIG1-203ENST00000536218 LMX1AQ8TE12 382 aa12.67□□□□□ -0.38
LIG1-203ENST00000536218 MISP3Q96FF7 219 aa12.67□□□□□ -0.38
LIG1-203ENST00000536218 PGLYRP3Q96LB9 341 aa12.67□□□□□ -0.38
LIG1-203ENST00000536218 FOXQ1Q9C009 403 aa12.67□□□□□ -0.38
LIG1-203ENST00000536218 RHOFQ9HBH0 211 aa12.67□□□□□ -0.38
LIG1-203ENST00000536218 ZMIZ1Q9ULJ6 1067 aa12.67□□□□□ -0.38
LIG1-203ENST00000536218 TNFSF18Q9UNG2 199 aa12.67□□□□□ -0.38
LIG1-203ENST00000536218 ENTPD2Q9Y5L3 495 aa12.67□□□□□ -0.38
LIG1-203ENST00000536218 A0A087X0M5 115 aa12.66□□□□□ -0.38
LIG1-203ENST00000536218 A0A1B0GX30 115 aa12.66□□□□□ -0.38
LIG1-203ENST00000536218 RBBP9O75884 186 aa12.66□□□□□ -0.38
LIG1-203ENST00000536218 IGHV2-5P01817 119 aa12.66□□□□□ -0.38
LIG1-203ENST00000536218 GTF2F2P13984 249 aa12.66□□□□□ -0.38
LIG1-203ENST00000536218 RCC1P18754 421 aaPredicted RBP12.66□□□□□ -0.38
LIG1-203ENST00000536218 CEBPEQ15744 281 aa12.66□□□□□ -0.38
LIG1-203ENST00000536218 PARGQ86W56 976 aa12.66□□□□□ -0.38
LIG1-203ENST00000536218 NRMQ8IXM6 262 aa12.66□□□□□ -0.38
LIG1-203ENST00000536218 PDCD1LG2Q9BQ51 273 aa12.66□□□□□ -0.38
LIG1-203ENST00000536218 POFUT1Q9H488 388 aa12.66□□□□□ -0.38
LIG1-203ENST00000536218 UNKLQ9H9P5 680 aaKnown RBP12.66□□□□□ -0.38
LIG1-203ENST00000536218 FBXO4Q9UKT5 387 aa12.66□□□□□ -0.38
LIG1-203ENST00000536218 CPED1A4D0V7 1026 aa12.66□□□□□ -0.38
LIG1-203ENST00000536218 ACOD1A6NK06 481 aa12.66□□□□□ -0.38
LIG1-203ENST00000536218 H7C1Q1 480 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms