RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 PLPP3O14495 311 aa11.84□□□□□ -0.51
LDLR-203ENST00000535915 CSRP1P21291 193 aaKnown RBP11.84□□□□□ -0.51
LDLR-203ENST00000535915 POU3F4P49335 361 aa11.84□□□□□ -0.51
LDLR-203ENST00000535915 EFNB2P52799 333 aa11.84□□□□□ -0.51
LDLR-203ENST00000535915 EIF2B1Q14232 305 aaKnown RBP11.84□□□□□ -0.51
LDLR-203ENST00000535915 ANKRD16Q6P6B7 361 aa11.84□□□□□ -0.51
LDLR-203ENST00000535915 KCTD18Q6PI47 426 aaPredicted RBP11.84□□□□□ -0.51
LDLR-203ENST00000535915 C16orf47Q6ZP98 133 aaPredicted RBP11.84□□□□□ -0.51
LDLR-203ENST00000535915 KDM8Q8N371 416 aa11.84□□□□□ -0.51
LDLR-203ENST00000535915 ZNF441Q8N8Z8 693 aa11.84□□□□□ -0.51
LDLR-203ENST00000535915 DPCDQ9BVM2 203 aaPredicted RBP11.84□□□□□ -0.51
LDLR-203ENST00000535915 SEMA4CQ9C0C4 833 aa11.84□□□□□ -0.51
LDLR-203ENST00000535915 CLEC4MQ9H2X3 399 aaPredicted RBP11.84□□□□□ -0.51
LDLR-203ENST00000535915 KCNK15Q9H427 330 aa11.84□□□□□ -0.51
LDLR-203ENST00000535915 HEXA-AS1Q9H8Q6 139 aa11.84□□□□□ -0.51
LDLR-203ENST00000535915 NPDC1Q9NQX5 325 aaPredicted RBP11.84□□□□□ -0.51
LDLR-203ENST00000535915 ZC4H2Q9NQZ6 224 aa11.84□□□□□ -0.51
LDLR-203ENST00000535915 MGAT4CQ9UBM8 478 aa11.84□□□□□ -0.51
LDLR-203ENST00000535915 GGT3PA6NGU5 568 aa11.84□□□□□ -0.51
LDLR-203ENST00000535915 TRIM77I1YAP6 450 aa11.84□□□□□ -0.51
LDLR-203ENST00000535915 CTAG2O75638 210 aa11.84□□□□□ -0.51
LDLR-203ENST00000535915 SLC22A5O76082 557 aa11.84□□□□□ -0.51
LDLR-203ENST00000535915 FAUP35544 74 aaKnown RBP11.84□□□□□ -0.51
LDLR-203ENST00000535915 TEX30Q5JUR7 227 aa11.84□□□□□ -0.51
LDLR-203ENST00000535915 NDUFAF7Q7L592 441 aa11.84□□□□□ -0.51
LDLR-203ENST00000535915 MARVELD3Q96A59 401 aa11.84□□□□□ -0.51
LDLR-203ENST00000535915 SLC41A2Q96JW4 573 aa11.84□□□□□ -0.51
LDLR-203ENST00000535915 FOXQ1Q9C009 403 aa11.84□□□□□ -0.51
LDLR-203ENST00000535915 PCED1AQ9H1Q7 454 aa11.84□□□□□ -0.51
LDLR-203ENST00000535915 FBXL3Q9UKT7 428 aa11.84□□□□□ -0.51
LDLR-203ENST00000535915 DHDHQ9UQ10 334 aa11.84□□□□□ -0.51
LDLR-203ENST00000535915 ASCC3Q8N3C0 2202 aaKnown RBP11.83□□□□□ -0.52
LDLR-203ENST00000535915 C2orf72A6NCS6 295 aa11.83□□□□□ -0.52
LDLR-203ENST00000535915 H7C417 338 aa11.83□□□□□ -0.52
LDLR-203ENST00000535915 SOX1O00570 391 aaPredicted RBP11.83□□□□□ -0.52
LDLR-203ENST00000535915 CREBL2O60519 120 aaPredicted RBP11.83□□□□□ -0.52
LDLR-203ENST00000535915 NDUFB6O95139 128 aa11.83□□□□□ -0.52
LDLR-203ENST00000535915 GLB1P16278 677 aa11.83□□□□□ -0.52
LDLR-203ENST00000535915 RIDAP52758 137 aaKnown RBP11.83□□□□□ -0.52
LDLR-203ENST00000535915 MFGE8Q08431 387 aaPredicted RBP11.83□□□□□ -0.52
LDLR-203ENST00000535915 C2orf76Q3KRA6 126 aa11.83□□□□□ -0.52
LDLR-203ENST00000535915 SEZ6L2Q6UXD5 910 aa11.83□□□□□ -0.52
LDLR-203ENST00000535915 MDGA2Q7Z553 956 aa11.83□□□□□ -0.52
LDLR-203ENST00000535915 FTMTQ8N4E7 242 aa11.83□□□□□ -0.52
LDLR-203ENST00000535915 PLPP7Q8NBV4 271 aa11.83□□□□□ -0.52
LDLR-203ENST00000535915 C8orf44Q96CB5 159 aa11.83□□□□□ -0.52
LDLR-203ENST00000535915 SORCS2Q96PQ0 1159 aa11.83□□□□□ -0.52
LDLR-203ENST00000535915 NKX3-1Q99801 234 aaPredicted RBP11.83□□□□□ -0.52
LDLR-203ENST00000535915 ABHD6Q9BV23 337 aa11.83□□□□□ -0.52
LDLR-203ENST00000535915 GPN1Q9HCN4 374 aaPredicted RBP11.83□□□□□ -0.52
LDLR-203ENST00000535915 MTFP1Q9UDX5 166 aa11.83□□□□□ -0.52
LDLR-203ENST00000535915 COA3Q9Y2R0 106 aaPredicted RBP11.83□□□□□ -0.52
LDLR-203ENST00000535915 RALGAPA1Q6GYQ0 2036 aa11.83□□□□□ -0.52
LDLR-203ENST00000535915 TRAV18A0A075B6X5 111 aa11.83□□□□□ -0.52
LDLR-203ENST00000535915 G3V3Q6 166 aa11.83□□□□□ -0.52
LDLR-203ENST00000535915 H3BUI4 141 aa11.83□□□□□ -0.52
LDLR-203ENST00000535915 OR2T1O43869 369 aa11.83□□□□□ -0.52
LDLR-203ENST00000535915 MPZL1O95297 269 aa11.83□□□□□ -0.52
LDLR-203ENST00000535915 HLA-DOBP13765 273 aa11.83□□□□□ -0.52
LDLR-203ENST00000535915 IL11P20809 199 aa11.83□□□□□ -0.52
LDLR-203ENST00000535915 RNF4P78317 190 aa11.83□□□□□ -0.52
LDLR-203ENST00000535915 ROM1Q03395 351 aa11.83□□□□□ -0.52
LDLR-203ENST00000535915 GLO1Q04760 184 aa11.83□□□□□ -0.52
LDLR-203ENST00000535915 SNTA1Q13424 505 aa11.83□□□□□ -0.52
LDLR-203ENST00000535915 RAB11BQ15907 218 aa11.83□□□□□ -0.52
LDLR-203ENST00000535915 YOD1Q5VVQ6 348 aaPredicted RBP11.83□□□□□ -0.52
LDLR-203ENST00000535915 DNM1P46Q6ZS02 220 aa11.83□□□□□ -0.52
LDLR-203ENST00000535915 ZNF248Q8NDW4 579 aa11.83□□□□□ -0.52
LDLR-203ENST00000535915 STK35Q8TDR2 534 aa11.83□□□□□ -0.52
LDLR-203ENST00000535915 THAP3Q8WTV1 239 aaPredicted RBP11.83□□□□□ -0.52
LDLR-203ENST00000535915 FAM3DQ96BQ1 224 aa11.83□□□□□ -0.52
LDLR-203ENST00000535915 ZNF501Q96CX3 271 aaPredicted RBP11.83□□□□□ -0.52
LDLR-203ENST00000535915 CHRDQ9H2X0 955 aa11.83□□□□□ -0.52
LDLR-203ENST00000535915 LRP12Q9Y561 859 aa11.83□□□□□ -0.52
LDLR-203ENST00000535915 MEIS3P1A6NDR6 274 aa11.82□□□□□ -0.52
LDLR-203ENST00000535915 WNT11O96014 354 aa11.82□□□□□ -0.52
LDLR-203ENST00000535915 IFNGR1P15260 489 aa11.82□□□□□ -0.52
LDLR-203ENST00000535915 CRABP1P29762 137 aa11.82□□□□□ -0.52
LDLR-203ENST00000535915 TSPAN5P62079 268 aa11.82□□□□□ -0.52
LDLR-203ENST00000535915 GUCA2AQ02747 115 aa11.82□□□□□ -0.52
LDLR-203ENST00000535915 SMAD4Q13485 552 aaKnown RBP11.82□□□□□ -0.52
LDLR-203ENST00000535915 STK11Q15831 433 aa11.82□□□□□ -0.52
LDLR-203ENST00000535915 TDHQ8IZJ6 230 aa11.82□□□□□ -0.52
LDLR-203ENST00000535915 OR4C16Q8NGL9 310 aa11.82□□□□□ -0.52
LDLR-203ENST00000535915 CDCP1Q9H5V8 836 aa11.82□□□□□ -0.52
LDLR-203ENST00000535915 CA10Q9NS85 328 aa11.82□□□□□ -0.52
LDLR-203ENST00000535915 SLC17A2O00624 439 aa11.82□□□□□ -0.52
LDLR-203ENST00000535915 KDM4BO94953 1096 aa11.82□□□□□ -0.52
LDLR-203ENST00000535915 IGHMP01871 453 aa11.82□□□□□ -0.52
LDLR-203ENST00000535915 CSF1P09603 554 aa11.82□□□□□ -0.52
LDLR-203ENST00000535915 CPN1P15169 458 aa11.82□□□□□ -0.52
LDLR-203ENST00000535915 SLC26A5P58743 744 aa11.82□□□□□ -0.52
LDLR-203ENST00000535915 PSMA6P60900 246 aaKnown RBP11.82□□□□□ -0.52
LDLR-203ENST00000535915 ASPHD2Q6ICH7 369 aa11.82□□□□□ -0.52
LDLR-203ENST00000535915 SLC25A45Q8N413 288 aa11.82□□□□□ -0.52
LDLR-203ENST00000535915 GALNT11Q8NCW6 608 aa11.82□□□□□ -0.52
LDLR-203ENST00000535915 PLPP5Q8NEB5 264 aa11.82□□□□□ -0.52
LDLR-203ENST00000535915 TMEM234Q8WY98 164 aa11.82□□□□□ -0.52
LDLR-203ENST00000535915 NUDT22Q9BRQ3 303 aa11.82□□□□□ -0.52
LDLR-203ENST00000535915 TAS2R8Q9NYW2 309 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms