RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 SKA3Q8IX90 412 aa13.64□□□□□ -0.23
CNN1-202ENST00000535659 CCDC36Q8IYA8 594 aa13.64□□□□□ -0.23
CNN1-202ENST00000535659 C17orf78Q8N4C9 275 aa13.64□□□□□ -0.23
CNN1-202ENST00000535659 ZNF511Q8NB15 262 aa13.64□□□□□ -0.23
CNN1-202ENST00000535659 SLC26A10Q8NG04 563 aa13.64□□□□□ -0.23
CNN1-202ENST00000535659 OR6K6Q8NGW6 343 aa13.64□□□□□ -0.23
CNN1-202ENST00000535659 C11orf40Q8WZ69 217 aa13.64□□□□□ -0.23
CNN1-202ENST00000535659 HTRA1Q92743 480 aa13.64□□□□□ -0.23
CNN1-202ENST00000535659 USP9XQ93008 2570 aaPredicted RBP13.64□□□□□ -0.23
CNN1-202ENST00000535659 RFKQ969G6 155 aa13.64□□□□□ -0.23
CNN1-202ENST00000535659 S100PBPQ96BU1 408 aa13.64□□□□□ -0.23
CNN1-202ENST00000535659 ZNF582Q96NG8 517 aaPredicted RBP13.64□□□□□ -0.23
CNN1-202ENST00000535659 SH3GL3Q99963 347 aa13.64□□□□□ -0.23
CNN1-202ENST00000535659 ACTR6Q9GZN1 396 aa13.64□□□□□ -0.23
CNN1-202ENST00000535659 CLN6Q9NWW5 311 aa13.64□□□□□ -0.23
CNN1-202ENST00000535659 ENTPD6O75354 484 aa13.64□□□□□ -0.23
CNN1-202ENST00000535659 HRGP04196 525 aa13.64□□□□□ -0.23
CNN1-202ENST00000535659 GAAP10253 952 aa13.64□□□□□ -0.23
CNN1-202ENST00000535659 MSR1P21757 451 aa13.64□□□□□ -0.23
CNN1-202ENST00000535659 LSM6P62312 80 aaKnown RBP13.64□□□□□ -0.23
CNN1-202ENST00000535659 SORDQ00796 357 aa13.64□□□□□ -0.23
CNN1-202ENST00000535659 TEKQ02763 1124 aa13.64□□□□□ -0.23
CNN1-202ENST00000535659 TIMM23BQ5SRD1 257 aa13.64□□□□□ -0.23
CNN1-202ENST00000535659 B3GLCTQ6Y288 498 aa13.64□□□□□ -0.23
CNN1-202ENST00000535659 THAP5Q7Z6K1 395 aa13.64□□□□□ -0.23
CNN1-202ENST00000535659 LRRC18Q8N456 261 aa13.64□□□□□ -0.23
CNN1-202ENST00000535659 WDR31Q8NA23 367 aa13.64□□□□□ -0.23
CNN1-202ENST00000535659 HSD17B8Q92506 261 aa13.64□□□□□ -0.23
CNN1-202ENST00000535659 KCNN2Q9H2S1 579 aa13.64□□□□□ -0.23
CNN1-202ENST00000535659 NPDC1Q9NQX5 325 aaPredicted RBP13.64□□□□□ -0.23
CNN1-202ENST00000535659 SLC17A5Q9NRA2 495 aa13.64□□□□□ -0.23
CNN1-202ENST00000535659 DNAJC27Q9NZQ0 273 aa13.64□□□□□ -0.23
CNN1-202ENST00000535659 KLF2Q9Y5W3 355 aaPredicted RBP13.64□□□□□ -0.23
CNN1-202ENST00000535659 TVP23AA6NH52 213 aa13.63□□□□□ -0.23
CNN1-202ENST00000535659 SLC22A31A6NKX4 558 aa13.63□□□□□ -0.23
CNN1-202ENST00000535659 SNTNA6NMZ2 147 aa13.63□□□□□ -0.23
CNN1-202ENST00000535659 PPP3CBP16298 524 aa13.63□□□□□ -0.23
CNN1-202ENST00000535659 ZNF823P16415 610 aa13.63□□□□□ -0.23
CNN1-202ENST00000535659 GSTT1P30711 240 aa13.63□□□□□ -0.23
CNN1-202ENST00000535659 CCKARP32238 428 aa13.63□□□□□ -0.23
CNN1-202ENST00000535659 CDH11P55287 796 aa13.63□□□□□ -0.23
CNN1-202ENST00000535659 UBE2NP61088 152 aaKnown RBP13.63□□□□□ -0.23
CNN1-202ENST00000535659 CDK5R2Q13319 367 aa13.63□□□□□ -0.23
CNN1-202ENST00000535659 MEP1BQ16820 701 aa13.63□□□□□ -0.23
CNN1-202ENST00000535659 C1QTNF12Q5T7M4 302 aa13.63□□□□□ -0.23
CNN1-202ENST00000535659 UGT2A3Q6UWM9 527 aa13.63□□□□□ -0.23
CNN1-202ENST00000535659 OR10H5Q8NGA6 315 aa13.63□□□□□ -0.23
CNN1-202ENST00000535659 APH1BQ8WW43 257 aa13.63□□□□□ -0.23
CNN1-202ENST00000535659 ZMYND19Q96E35 227 aaPredicted RBP13.63□□□□□ -0.23
CNN1-202ENST00000535659 ZNF416Q9BWM5 594 aa13.63□□□□□ -0.23
CNN1-202ENST00000535659 ANKRD60Q9BZ19 345 aa13.63□□□□□ -0.23
CNN1-202ENST00000535659 EMC7Q9NPA0 242 aa13.63□□□□□ -0.23
CNN1-202ENST00000535659 MRPL22Q9NWU5 206 aaKnown RBP13.63□□□□□ -0.23
CNN1-202ENST00000535659 WARS2Q9UGM6 360 aaKnown RBP13.63□□□□□ -0.23
CNN1-202ENST00000535659 NDRG3Q9UGV2 375 aa13.63□□□□□ -0.23
CNN1-202ENST00000535659 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.63□□□□□ -0.23
CNN1-202ENST00000535659 ARPC4-TTLL3A0A0A6YYG9 625 aa13.62□□□□□ -0.23
CNN1-202ENST00000535659 CCDC182A6NF36 153 aa13.62□□□□□ -0.23
CNN1-202ENST00000535659 WBP4O75554 376 aaKnown RBP13.62□□□□□ -0.23
CNN1-202ENST00000535659 CST2P09228 141 aa13.62□□□□□ -0.23
CNN1-202ENST00000535659 MYF6P23409 242 aa13.62□□□□□ -0.23
CNN1-202ENST00000535659 HTR1FP30939 366 aa13.62□□□□□ -0.23
CNN1-202ENST00000535659 HOXC12P31275 282 aa13.62□□□□□ -0.23
CNN1-202ENST00000535659 TMED1Q13445 227 aa13.62□□□□□ -0.23
CNN1-202ENST00000535659 LCN1P1Q5VSP4 162 aa13.62□□□□□ -0.23
CNN1-202ENST00000535659 OTPQ5XKR4 325 aa13.62□□□□□ -0.23
CNN1-202ENST00000535659 LYPD4Q6UWN0 246 aa13.62□□□□□ -0.23
CNN1-202ENST00000535659 C22orf34Q6ZV56 151 aa13.62□□□□□ -0.23
CNN1-202ENST00000535659 SLC16A14Q7RTX9 510 aa13.62□□□□□ -0.23
CNN1-202ENST00000535659 DPPA2Q7Z7J5 298 aa13.62□□□□□ -0.23
CNN1-202ENST00000535659 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.62□□□□□ -0.23
CNN1-202ENST00000535659 OR52N5Q8NH56 324 aa13.62□□□□□ -0.23
CNN1-202ENST00000535659 MUCL1Q96DR8 90 aa13.62□□□□□ -0.23
CNN1-202ENST00000535659 WFIKKN1Q96NZ8 548 aa13.62□□□□□ -0.23
CNN1-202ENST00000535659 WACQ9BTA9 647 aa13.62□□□□□ -0.23
CNN1-202ENST00000535659 CDADC1Q9BWV3 514 aa13.62□□□□□ -0.23
CNN1-202ENST00000535659 Q9H521 79 aa13.62□□□□□ -0.23
CNN1-202ENST00000535659 WDR76Q9H967 626 aa13.62□□□□□ -0.23
CNN1-202ENST00000535659 MARCH7Q9H992 704 aa13.62□□□□□ -0.23
CNN1-202ENST00000535659 OBP2BQ9NPH6 170 aa13.62□□□□□ -0.23
CNN1-202ENST00000535659 B3GNT2Q9NY97 397 aa13.62□□□□□ -0.23
CNN1-202ENST00000535659 HAO2Q9NYQ3 351 aa13.62□□□□□ -0.23
CNN1-202ENST00000535659 ZNF224Q9NZL3 707 aa13.62□□□□□ -0.23
CNN1-202ENST00000535659 AMDHD2Q9Y303 409 aa13.62□□□□□ -0.23
CNN1-202ENST00000535659 DOPEY1Q5JWR5 2465 aa13.61□□□□□ -0.23
CNN1-202ENST00000535659 A0A1W2PR80 420 aa13.61□□□□□ -0.23
CNN1-202ENST00000535659 SH3D21A4FU49 640 aa13.61□□□□□ -0.23
CNN1-202ENST00000535659 C12orf71A8MTZ7 269 aa13.61□□□□□ -0.23
CNN1-202ENST00000535659 C19orf84I3L1E1 186 aa13.61□□□□□ -0.23
CNN1-202ENST00000535659 ZNF593O00488 134 aaPredicted RBP13.61□□□□□ -0.23
CNN1-202ENST00000535659 DENRO43583 198 aaKnown RBP13.61□□□□□ -0.23
CNN1-202ENST00000535659 WNT11O96014 354 aa13.61□□□□□ -0.23
CNN1-202ENST00000535659 HLA-HP01893 362 aa13.61□□□□□ -0.23
CNN1-202ENST00000535659 PEX19P40855 299 aa13.61□□□□□ -0.23
CNN1-202ENST00000535659 CAPZA2P47755 286 aa13.61□□□□□ -0.23
CNN1-202ENST00000535659 PCBD1P61457 104 aa13.61□□□□□ -0.23
CNN1-202ENST00000535659 PIGFQ07326 219 aa13.61□□□□□ -0.23
CNN1-202ENST00000535659 SNTB1Q13884 538 aaKnown RBP13.61□□□□□ -0.23
CNN1-202ENST00000535659 ENDOGQ14249 297 aaKnown RBP13.61□□□□□ -0.23
CNN1-202ENST00000535659 TAB1Q15750 504 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms