RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 GOLGA6L4A6NEF3 574 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 ARHGAP42A6NI28 874 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 ZNF726A6NNF4 738 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 A8MXQ7 604 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 CLDN5O00501 218 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 DNALI1O14645 258 aaPredicted RBP-0.16□□□□□ -2.44
COPB1-212ENST00000534771 PLIN3O60664 434 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 PALMO75781 387 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 UTS2O95399 124 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 AP2A1O95782 977 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 PAHP00439 452 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 HMOX1P09601 288 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 ACSM4P0C7M7 580 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 CALM1P0DP23 149 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 CALM2P0DP24 149 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 CALM3P0DP25 149 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 SERPINB5P36952 375 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 MAP3K8P41279 467 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 MAGEA6P43360 314 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 LGALS7P47929 136 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 UBE2E1P51965 193 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 ZNF140P52738 457 aaPredicted RBP-0.16□□□□□ -2.44
COPB1-212ENST00000534771 ZNF138P52744 262 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 PLA2G16P53816 162 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 EMP2P54851 167 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 UGT2B15P54855 530 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 CCL23P55773 120 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 SLC26A5P58743 744 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 UBE2NP61088 152 aaKnown RBP-0.16□□□□□ -2.44
COPB1-212ENST00000534771 ARF5P84085 180 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 CDK16Q00536 496 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 IL5RAQ01344 420 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 OR5I1Q13606 314 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 SCARB2Q14108 478 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 DUSP7Q16829 419 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 AVPI1Q5T686 147 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 ANKRD22Q5VYY1 191 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 KCTD16Q68DU8 428 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 ZNF660Q6AZW8 331 aaPredicted RBP-0.16□□□□□ -2.44
COPB1-212ENST00000534771 OR6B2Q6IFH4 312 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 H3F3CQ6NXT2 135 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 ZNF322Q6U7Q0 402 aaPredicted RBP-0.16□□□□□ -2.44
COPB1-212ENST00000534771 Q6ZRN7 208 aaPredicted RBP-0.16□□□□□ -2.44
COPB1-212ENST00000534771 KIAA1328Q86T90 577 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 METTL13Q8N6R0 699 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 HSD17B11Q8NBQ5 300 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 OR5T1Q8NG75 326 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 OR52H1Q8NGJ2 320 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 SH3YL1Q96HL8 342 aaPredicted RBP-0.16□□□□□ -2.44
COPB1-212ENST00000534771 NPY6RQ99463 290 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 RNF2Q99496 336 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 P2RX4Q99571 388 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 RETNLBQ9BQ08 111 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 TUBGCP2Q9BSJ2 902 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 ZWILCHQ9H900 591 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 RHBDL2Q9NX52 303 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 GNG12Q9UBI6 72 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 HMGXB4Q9UGU5 601 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 NUDCQ9Y266 331 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 TMED5Q9Y3A6 229 aa-0.16□□□□□ -2.44
COPB1-212ENST00000534771 RPRD2Q5VT52 1461 aaKnown RBP-0.16□□□□□ -2.44
COPB1-212ENST00000534771 ZFHX2Q9C0A1 2572 aaPredicted RBP-0.17□□□□□ -2.44
COPB1-212ENST00000534771 IGHV3-72A0A0B4J1Y9 119 aa-0.17□□□□□ -2.44
COPB1-212ENST00000534771 OR6C74A6NCV1 312 aa-0.17□□□□□ -2.44
COPB1-212ENST00000534771 CFAP73A6NFT4 308 aa-0.17□□□□□ -2.44
COPB1-212ENST00000534771 OR5H1A6NKK0 313 aa-0.17□□□□□ -2.44
COPB1-212ENST00000534771 SIGLEC16A6NMB1 481 aa-0.17□□□□□ -2.44
COPB1-212ENST00000534771 GPR89AB7ZAQ6 455 aa-0.17□□□□□ -2.44
COPB1-212ENST00000534771 C9JVG2 144 aa-0.17□□□□□ -2.44
COPB1-212ENST00000534771 CTAGE5O15320 804 aa-0.17□□□□□ -2.44
COPB1-212ENST00000534771 RGS16O15492 202 aaPredicted RBP-0.17□□□□□ -2.44
COPB1-212ENST00000534771 CHMP2AO43633 222 aa-0.17□□□□□ -2.44
COPB1-212ENST00000534771 PSCAO43653 123 aa-0.17□□□□□ -2.44
COPB1-212ENST00000534771 CTAG2O75638 210 aa-0.17□□□□□ -2.44
COPB1-212ENST00000534771 OR4F21O95013 312 aa-0.17□□□□□ -2.44
COPB1-212ENST00000534771 CDS2O95674 445 aa-0.17□□□□□ -2.44
COPB1-212ENST00000534771 IGHV3-11P01762 117 aa-0.17□□□□□ -2.44
COPB1-212ENST00000534771 GPR89BP0CG08 455 aa-0.17□□□□□ -2.44
COPB1-212ENST00000534771 THRAP10827 490 aa-0.17□□□□□ -2.44
COPB1-212ENST00000534771 IMPDH1P20839 514 aa-0.17□□□□□ -2.44
COPB1-212ENST00000534771 DRD5P21918 477 aa-0.17□□□□□ -2.44
COPB1-212ENST00000534771 CD1CP29017 333 aa-0.17□□□□□ -2.44
COPB1-212ENST00000534771 OTX1P32242 354 aaPredicted RBP-0.17□□□□□ -2.44
COPB1-212ENST00000534771 MAS1LP35410 378 aa-0.17□□□□□ -2.44
COPB1-212ENST00000534771 CDKN1BP46527 198 aa-0.17□□□□□ -2.44
COPB1-212ENST00000534771 P2RY1P47900 373 aa-0.17□□□□□ -2.44
COPB1-212ENST00000534771 CASP4P49662 377 aa-0.17□□□□□ -2.44
COPB1-212ENST00000534771 TMED10P49755 219 aaKnown RBP-0.17□□□□□ -2.44
COPB1-212ENST00000534771 RORCP51449 518 aa-0.17□□□□□ -2.44
COPB1-212ENST00000534771 KLF3P57682 345 aaPredicted RBP-0.17□□□□□ -2.44
COPB1-212ENST00000534771 NUTF2P61970 127 aaKnown RBP-0.17□□□□□ -2.44
COPB1-212ENST00000534771 CCNA1P78396 465 aa-0.17□□□□□ -2.44
COPB1-212ENST00000534771 CDK5Q00535 292 aa-0.17□□□□□ -2.44
COPB1-212ENST00000534771 ARHGAP19Q14CB8 494 aa-0.17□□□□□ -2.44
COPB1-212ENST00000534771 PTPN20Q4JDL3 420 aa-0.17□□□□□ -2.44
COPB1-212ENST00000534771 TCEAL5Q5H9L2 206 aa-0.17□□□□□ -2.44
COPB1-212ENST00000534771 CCNJQ5T5M9 372 aa-0.17□□□□□ -2.44
COPB1-212ENST00000534771 LRRC8BQ6P9F7 803 aa-0.17□□□□□ -2.44
COPB1-212ENST00000534771 IYDQ6PHW0 289 aa-0.17□□□□□ -2.44
COPB1-212ENST00000534771 DAZ4Q86SG3 579 aaKnown RBP-0.17□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms