RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 CYP51A1Q16850 503 aa18.03■□□□□ 0.48
SSH3-211ENST00000534112 UNQ6126/PRO20091Q6UXV3 157 aa18.03■□□□□ 0.48
SSH3-211ENST00000534112 DOK3Q7L591 496 aa18.03■□□□□ 0.48
SSH3-211ENST00000534112 POP5Q969H6 163 aaKnown RBP18.03■□□□□ 0.48
SSH3-211ENST00000534112 ATP6V1G3Q96LB4 118 aa18.03■□□□□ 0.48
SSH3-211ENST00000534112 DUX5Q96PT3 197 aa18.03■□□□□ 0.48
SSH3-211ENST00000534112 PRSS27Q9BQR3 290 aa18.03■□□□□ 0.48
SSH3-211ENST00000534112 CCDC28BQ9BUN5 200 aa18.03■□□□□ 0.48
SSH3-211ENST00000534112 OR2J1Q9GZK6 312 aa18.03■□□□□ 0.48
SSH3-211ENST00000534112 PCDHAC1Q9H158 963 aa18.03■□□□□ 0.48
SSH3-211ENST00000534112 MMP26Q9NRE1 261 aa18.03■□□□□ 0.48
SSH3-211ENST00000534112 CYSLTR2Q9NS75 346 aa18.03■□□□□ 0.48
SSH3-211ENST00000534112 PURGQ9UJV8 347 aaKnown RBP18.03■□□□□ 0.48
SSH3-211ENST00000534112 UGT2A1Q9Y4X1 527 aa18.03■□□□□ 0.48
SSH3-211ENST00000534112 TGP01266 2768 aa18.03■□□□□ 0.48
SSH3-211ENST00000534112 SLC2A10O95528 541 aa18.02■□□□□ 0.48
SSH3-211ENST00000534112 LIPAP38571 399 aa18.02■□□□□ 0.48
SSH3-211ENST00000534112 GDI2P50395 445 aaKnown RBP18.02■□□□□ 0.48
SSH3-211ENST00000534112 ATP4BP51164 291 aa18.02■□□□□ 0.48
SSH3-211ENST00000534112 DAP3P51398 398 aaKnown RBP18.02■□□□□ 0.48
SSH3-211ENST00000534112 SPRNQ5BIV9 151 aa18.02■□□□□ 0.48
SSH3-211ENST00000534112 TTMPQ5BVD1 217 aa18.02■□□□□ 0.48
SSH3-211ENST00000534112 HDDC2Q7Z4H3 204 aa18.02■□□□□ 0.48
SSH3-211ENST00000534112 AKR7LQ8NHP1 331 aa18.02■□□□□ 0.48
SSH3-211ENST00000534112 GEMIN6Q8WXD5 167 aaKnown RBP18.02■□□□□ 0.48
SSH3-211ENST00000534112 NABP1Q96AH0 204 aa18.02■□□□□ 0.48
SSH3-211ENST00000534112 C7orf26Q96N11 449 aa18.02■□□□□ 0.48
SSH3-211ENST00000534112 NPHS2Q9NP85 383 aa18.02■□□□□ 0.48
SSH3-211ENST00000534112 INIPQ9NRY2 104 aa18.02■□□□□ 0.48
SSH3-211ENST00000534112 ZNF69Q9UC07 566 aa18.02■□□□□ 0.48
SSH3-211ENST00000534112 KLHL21Q9UJP4 597 aa18.02■□□□□ 0.48
SSH3-211ENST00000534112 NUP50Q9UKX7 468 aa18.02■□□□□ 0.48
SSH3-211ENST00000534112 ZDHHC8Q9ULC8 765 aa18.02■□□□□ 0.48
SSH3-211ENST00000534112 SBK2P0C263 348 aa18.01■□□□□ 0.47
SSH3-211ENST00000534112 FUT1P19526 365 aa18.01■□□□□ 0.47
SSH3-211ENST00000534112 CD247P20963 164 aa18.01■□□□□ 0.47
SSH3-211ENST00000534112 AQP2P41181 271 aa18.01■□□□□ 0.47
SSH3-211ENST00000534112 PSG4Q00888 419 aa18.01■□□□□ 0.47
SSH3-211ENST00000534112 HNRNPA0Q13151 305 aaKnown RBP18.01■□□□□ 0.47
SSH3-211ENST00000534112 SGCAQ16586 387 aa18.01■□□□□ 0.47
SSH3-211ENST00000534112 ARMCX4Q5H9R4 360 aa18.01■□□□□ 0.47
SSH3-211ENST00000534112 ARMC4Q5T2S8 1044 aa18.01■□□□□ 0.47
SSH3-211ENST00000534112 RFPL4BQ6ZWI9 263 aa18.01■□□□□ 0.47
SSH3-211ENST00000534112 C1orf174Q8IYL3 243 aa18.01■□□□□ 0.47
SSH3-211ENST00000534112 NMD3Q96D46 503 aaKnown RBP18.01■□□□□ 0.47
SSH3-211ENST00000534112 C1orf147Q96MC9 270 aaPredicted RBP18.01■□□□□ 0.47
SSH3-211ENST00000534112 GPA33Q99795 319 aa18.01■□□□□ 0.47
SSH3-211ENST00000534112 DCAF16Q9NXF7 216 aa18.01■□□□□ 0.47
SSH3-211ENST00000534112 PLEK2Q9NYT0 353 aa18.01■□□□□ 0.47
SSH3-211ENST00000534112 NPTNQ9Y639 398 aa18.01■□□□□ 0.47
SSH3-211ENST00000534112 AUP1Q9Y679 476 aa18.01■□□□□ 0.47
SSH3-211ENST00000534112 IGKV1D-43A0A0B4J1Z2 117 aa18■□□□□ 0.47
SSH3-211ENST00000534112 DNAJC9-AS1A6NH13 148 aa18■□□□□ 0.47
SSH3-211ENST00000534112 TRAPPC2LH3BP13 241 aa18■□□□□ 0.47
SSH3-211ENST00000534112 IGHV2-70P01814 119 aa18■□□□□ 0.47
SSH3-211ENST00000534112 MT-ND1P03886 318 aa18■□□□□ 0.47
SSH3-211ENST00000534112 CD55P08174 381 aa18■□□□□ 0.47
SSH3-211ENST00000534112 MTPNP58546 118 aa18■□□□□ 0.47
SSH3-211ENST00000534112 PPP1CBP62140 327 aa18■□□□□ 0.47
SSH3-211ENST00000534112 ZNF154Q13106 437 aa18■□□□□ 0.47
SSH3-211ENST00000534112 SELPLGQ14242 412 aa18■□□□□ 0.47
SSH3-211ENST00000534112 KLF17Q5JT82 389 aaPredicted RBP18■□□□□ 0.47
SSH3-211ENST00000534112 PATL1Q86TB9 770 aaKnown RBP18■□□□□ 0.47
SSH3-211ENST00000534112 BCL6BQ8N143 479 aaPredicted RBP18■□□□□ 0.47
SSH3-211ENST00000534112 ABHD4Q8TB40 342 aa18■□□□□ 0.47
SSH3-211ENST00000534112 NSMAFQ92636 917 aa18■□□□□ 0.47
SSH3-211ENST00000534112 TAMM41Q96BW9 452 aa18■□□□□ 0.47
SSH3-211ENST00000534112 DCLRE1CQ96SD1 692 aaKnown RBP18■□□□□ 0.47
SSH3-211ENST00000534112 DIRC2Q96SL1 478 aa18■□□□□ 0.47
SSH3-211ENST00000534112 UNKLQ9H9P5 680 aaKnown RBP18■□□□□ 0.47
SSH3-211ENST00000534112 NANOGQ9H9S0 305 aa18■□□□□ 0.47
SSH3-211ENST00000534112 ZMAT3Q9HA38 289 aaKnown RBP18■□□□□ 0.47
SSH3-211ENST00000534112 SMURF2Q9HAU4 748 aa18■□□□□ 0.47
SSH3-211ENST00000534112 MSL2Q9HCI7 577 aa18■□□□□ 0.47
SSH3-211ENST00000534112 ZNF446Q9NWS9 450 aa18■□□□□ 0.47
SSH3-211ENST00000534112 CGGBP1Q9UFW8 167 aaPredicted RBP18■□□□□ 0.47
SSH3-211ENST00000534112 EGFL7Q9UHF1 273 aa18■□□□□ 0.47
SSH3-211ENST00000534112 POLR3KQ9Y2Y1 108 aaPredicted RBP18■□□□□ 0.47
SSH3-211ENST00000534112 OR7A10O76100 309 aa17.99■□□□□ 0.47
SSH3-211ENST00000534112 NGFP01138 241 aa17.99■□□□□ 0.47
SSH3-211ENST00000534112 IGHMP01871 453 aa17.99■□□□□ 0.47
SSH3-211ENST00000534112 ERVK-25P63136 954 aa17.99■□□□□ 0.47
SSH3-211ENST00000534112 FMODQ06828 376 aa17.99■□□□□ 0.47
SSH3-211ENST00000534112 BAMBIQ13145 260 aa17.99■□□□□ 0.47
SSH3-211ENST00000534112 PDLIM3Q53GG5 364 aaPredicted RBP17.99■□□□□ 0.47
SSH3-211ENST00000534112 FAM27BQ5VT28 67 aa17.99■□□□□ 0.47
SSH3-211ENST00000534112 TREML4Q6UXN2 200 aa17.99■□□□□ 0.47
SSH3-211ENST00000534112 DHDDSQ86SQ9 333 aa17.99■□□□□ 0.47
SSH3-211ENST00000534112 MOSPD2Q8NHP6 518 aa17.99■□□□□ 0.47
SSH3-211ENST00000534112 PFN4Q8NHR9 129 aa17.99■□□□□ 0.47
SSH3-211ENST00000534112 HDAC2Q92769 488 aaKnown RBP17.99■□□□□ 0.47
SSH3-211ENST00000534112 STX18Q9P2W9 335 aaKnown RBP17.99■□□□□ 0.47
SSH3-211ENST00000534112 H3BSA7 217 aa17.98■□□□□ 0.47
SSH3-211ENST00000534112 ICMTO60725 284 aa17.98■□□□□ 0.47
SSH3-211ENST00000534112 VIMP08670 466 aaKnown RBP17.98■□□□□ 0.47
SSH3-211ENST00000534112 ZNF12P17014 697 aa17.98■□□□□ 0.47
SSH3-211ENST00000534112 RBMXP38159 391 aaKnown RBP17.98■□□□□ 0.47
SSH3-211ENST00000534112 TNFAIP6P98066 277 aaPredicted RBP17.98■□□□□ 0.47
SSH3-211ENST00000534112 DEFA6Q01524 100 aa17.98■□□□□ 0.47
SSH3-211ENST00000534112 ZMAT1Q5H9K5 638 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms