RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 ERMAPQ96PL5 475 aaPredicted RBP13.7□□□□□ -0.22
TSKU-204ENST00000533752 SNX18Q96RF0 628 aa13.7□□□□□ -0.22
TSKU-204ENST00000533752 IFT27Q9BW83 186 aa13.7□□□□□ -0.22
TSKU-204ENST00000533752 CHID1Q9BWS9 393 aa13.7□□□□□ -0.22
TSKU-204ENST00000533752 SYT4Q9H2B2 425 aa13.7□□□□□ -0.22
TSKU-204ENST00000533752 CDH20Q9HBT6 801 aa13.7□□□□□ -0.22
TSKU-204ENST00000533752 DLL4Q9NR61 685 aa13.7□□□□□ -0.22
TSKU-204ENST00000533752 IL20RAQ9UHF4 553 aa13.7□□□□□ -0.22
TSKU-204ENST00000533752 CDH10Q9Y6N8 788 aa13.7□□□□□ -0.22
TSKU-204ENST00000533752 C12orf71A8MTZ7 269 aa13.69□□□□□ -0.22
TSKU-204ENST00000533752 SOCS2O14508 198 aa13.69□□□□□ -0.22
TSKU-204ENST00000533752 KHDRBS3O75525 346 aaKnown RBP13.69□□□□□ -0.22
TSKU-204ENST00000533752 PPP1R3DO95685 299 aa13.69□□□□□ -0.22
TSKU-204ENST00000533752 IGHV4-39P01824 125 aa13.69□□□□□ -0.22
TSKU-204ENST00000533752 GSTM3P21266 225 aa13.69□□□□□ -0.22
TSKU-204ENST00000533752 NOS3P29474 1203 aa13.69□□□□□ -0.22
TSKU-204ENST00000533752 CRABP1P29762 137 aa13.69□□□□□ -0.22
TSKU-204ENST00000533752 APLNRP35414 380 aa13.69□□□□□ -0.22
TSKU-204ENST00000533752 GLRXP35754 106 aa13.69□□□□□ -0.22
TSKU-204ENST00000533752 RAB35Q15286 201 aa13.69□□□□□ -0.22
TSKU-204ENST00000533752 MICAQ29983 383 aa13.69□□□□□ -0.22
TSKU-204ENST00000533752 ZNF770Q6IQ21 691 aaPredicted RBP13.69□□□□□ -0.22
TSKU-204ENST00000533752 SYT9Q86SS6 491 aa13.69□□□□□ -0.22
TSKU-204ENST00000533752 SPATA24Q86W54 205 aa13.69□□□□□ -0.22
TSKU-204ENST00000533752 ALDH16A1Q8IZ83 802 aa13.69□□□□□ -0.22
TSKU-204ENST00000533752 AQP11Q8NBQ7 271 aa13.69□□□□□ -0.22
TSKU-204ENST00000533752 OR9Q2Q8NGE9 314 aa13.69□□□□□ -0.22
TSKU-204ENST00000533752 C18orf12Q96KH6 178 aa13.69□□□□□ -0.22
TSKU-204ENST00000533752 MMADHCQ9H3L0 296 aaPredicted RBP13.69□□□□□ -0.22
TSKU-204ENST00000533752 PLK3Q9H4B4 646 aa13.69□□□□□ -0.22
TSKU-204ENST00000533752 POLE4Q9NR33 117 aa13.69□□□□□ -0.22
TSKU-204ENST00000533752 POMPQ9Y244 141 aa13.69□□□□□ -0.22
TSKU-204ENST00000533752 CMAHPQ9Y471 501 aa13.69□□□□□ -0.22
TSKU-204ENST00000533752 FKBP7Q9Y680 259 aa13.69□□□□□ -0.22
TSKU-204ENST00000533752 ARRDC5A6NEK1 342 aa13.68□□□□□ -0.22
TSKU-204ENST00000533752 GSC2O15499 205 aa13.68□□□□□ -0.22
TSKU-204ENST00000533752 RENP00797 406 aa13.68□□□□□ -0.22
TSKU-204ENST00000533752 CST1P01037 141 aa13.68□□□□□ -0.22
TSKU-204ENST00000533752 CTLA4P16410 223 aa13.68□□□□□ -0.22
TSKU-204ENST00000533752 ZNF32P17041 273 aa13.68□□□□□ -0.22
TSKU-204ENST00000533752 LAP3P28838 519 aa13.68□□□□□ -0.22
TSKU-204ENST00000533752 THBS4P35443 961 aa13.68□□□□□ -0.22
TSKU-204ENST00000533752 PPOXP50336 477 aa13.68□□□□□ -0.22
TSKU-204ENST00000533752 NUDT6P53370 316 aa13.68□□□□□ -0.22
TSKU-204ENST00000533752 CLEC12BQ2HXU8 276 aa13.68□□□□□ -0.22
TSKU-204ENST00000533752 PABPC1L2AQ5JQF8 200 aa13.68□□□□□ -0.22
TSKU-204ENST00000533752 UNQ6126/PRO20091Q6UXV3 157 aa13.68□□□□□ -0.22
TSKU-204ENST00000533752 RASSF6Q6ZTQ3 369 aa13.68□□□□□ -0.22
TSKU-204ENST00000533752 GLB1L2Q8IW92 636 aa13.68□□□□□ -0.22
TSKU-204ENST00000533752 CANT1Q8WVQ1 401 aa13.68□□□□□ -0.22
TSKU-204ENST00000533752 SAMD8Q96LT4 415 aa13.68□□□□□ -0.22
TSKU-204ENST00000533752 DGCR6LQ9BY27 220 aa13.68□□□□□ -0.22
TSKU-204ENST00000533752 CADM1Q9BY67 442 aaKnown RBP13.68□□□□□ -0.22
TSKU-204ENST00000533752 TIMM10BQ9Y5J6 103 aa13.68□□□□□ -0.22
TSKU-204ENST00000533752 U3KQV3 271 aa13.68□□□□□ -0.22
TSKU-204ENST00000533752 TCRBV3S1A0A5B6 114 aa13.67□□□□□ -0.22
TSKU-204ENST00000533752 FAM171A2A8MVW0 826 aa13.67□□□□□ -0.22
TSKU-204ENST00000533752 GNGT2O14610 69 aa13.67□□□□□ -0.22
TSKU-204ENST00000533752 SLC16A7O60669 478 aa13.67□□□□□ -0.22
TSKU-204ENST00000533752 ERCC1P07992 297 aaPredicted RBP13.67□□□□□ -0.22
TSKU-204ENST00000533752 CSF3P09919 207 aa13.67□□□□□ -0.22
TSKU-204ENST00000533752 PCSK6P29122 969 aa13.67□□□□□ -0.22
TSKU-204ENST00000533752 EVX1P49640 407 aa13.67□□□□□ -0.22
TSKU-204ENST00000533752 DSCR9P59020 149 aa13.67□□□□□ -0.22
TSKU-204ENST00000533752 SCRN3Q0VDG4 424 aa13.67□□□□□ -0.22
TSKU-204ENST00000533752 MST1LQ2TV78 715 aa13.67□□□□□ -0.22
TSKU-204ENST00000533752 PTCHD4Q6ZW05 846 aa13.67□□□□□ -0.22
TSKU-204ENST00000533752 OR10G2Q8NGC3 310 aa13.67□□□□□ -0.22
TSKU-204ENST00000533752 MRPL24Q96A35 216 aaKnown RBP13.67□□□□□ -0.22
TSKU-204ENST00000533752 COX4I2Q96KJ9 171 aa13.67□□□□□ -0.22
TSKU-204ENST00000533752 BCL2L14Q9BZR8 327 aa13.67□□□□□ -0.22
TSKU-204ENST00000533752 OR2H1Q9GZK4 316 aa13.67□□□□□ -0.22
TSKU-204ENST00000533752 VNN3Q9NY84 501 aa13.67□□□□□ -0.22
TSKU-204ENST00000533752 IL20Q9NYY1 176 aa13.67□□□□□ -0.22
TSKU-204ENST00000533752 GDF2Q9UK05 429 aaPredicted RBP13.67□□□□□ -0.22
TSKU-204ENST00000533752 GASTP01350 101 aa13.66□□□□□ -0.22
TSKU-204ENST00000533752 INHBBP09529 407 aa13.66□□□□□ -0.22
TSKU-204ENST00000533752 STOMP27105 288 aa13.66□□□□□ -0.22
TSKU-204ENST00000533752 CDKN2AP42771 156 aaKnown RBP13.66□□□□□ -0.22
TSKU-204ENST00000533752 RAD52P43351 418 aa13.66□□□□□ -0.22
TSKU-204ENST00000533752 GDI2P50395 445 aaKnown RBP13.66□□□□□ -0.22
TSKU-204ENST00000533752 EFNA4P52798 201 aa13.66□□□□□ -0.22
TSKU-204ENST00000533752 LSM6P62312 80 aaKnown RBP13.66□□□□□ -0.22
TSKU-204ENST00000533752 AQP6Q13520 282 aa13.66□□□□□ -0.22
TSKU-204ENST00000533752 ENDOGQ14249 297 aaKnown RBP13.66□□□□□ -0.22
TSKU-204ENST00000533752 LEG1Q6P5S2 330 aa13.66□□□□□ -0.22
TSKU-204ENST00000533752 CLEC2AQ6UVW9 174 aa13.66□□□□□ -0.22
TSKU-204ENST00000533752 BIVMQ86UB2 503 aa13.66□□□□□ -0.22
TSKU-204ENST00000533752 GIPC3Q8TF64 312 aa13.66□□□□□ -0.22
TSKU-204ENST00000533752 ZNF416Q9BWM5 594 aa13.66□□□□□ -0.22
TSKU-204ENST00000533752 NUAK2Q9H093 628 aa13.66□□□□□ -0.22
TSKU-204ENST00000533752 RACGAP1Q9H0H5 632 aa13.66□□□□□ -0.22
TSKU-204ENST00000533752 RERGLQ9H628 205 aa13.66□□□□□ -0.22
TSKU-204ENST00000533752 EGLN3Q9H6Z9 239 aa13.66□□□□□ -0.22
TSKU-204ENST00000533752 TBC1D23Q9NUY8 699 aa13.66□□□□□ -0.22
TSKU-204ENST00000533752 NDRG4Q9ULP0 352 aaKnown RBP13.66□□□□□ -0.22
TSKU-204ENST00000533752 BAIAP2Q9UQB8 552 aa13.66□□□□□ -0.22
TSKU-204ENST00000533752 VPS13CQ709C8 3753 aa13.65□□□□□ -0.22
TSKU-204ENST00000533752 TRIM64A6NGJ6 449 aa13.65□□□□□ -0.22
TSKU-204ENST00000533752 TRIM64BA6NI03 449 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms