RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 LRFN5Q96NI6 719 aa13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 MED18Q9BUE0 208 aa13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 CRISPLD2Q9H0B8 497 aa13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 SPNS1Q9H2V7 528 aa13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 MOB1AQ9H8S9 216 aa13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 BCO1Q9HAY6 547 aa13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 QSER1Q2KHR3 1735 aa13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 TTC3P53804 2025 aa13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 HSBP1L1C9JCN9 74 aa13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 CRYABP02511 175 aaKnown RBP13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 SCG5P05408 212 aa13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 ACHEP22303 614 aa13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 OR8G1Q15617 311 aa13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 EMC4Q5J8M3 183 aa13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 OTPQ5XKR4 325 aa13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 IDO2Q6ZQW0 420 aa13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 CLDN22Q8N7P3 220 aa13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 NUDT9Q9BW91 350 aa13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 WWTR1Q9GZV5 400 aa13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 WSB2Q9NYS7 404 aaPredicted RBP13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 COA3Q9Y2R0 106 aaPredicted RBP13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 XIRP1Q702N8 1843 aaKnown RBP13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 TNFSF11O14788 317 aa13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 NDUFB7P17568 137 aa13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 CHATP28329 748 aa13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 SLC6A12P48065 614 aa13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 FAM199XQ6PEV8 388 aaPredicted RBP13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 DEFB124Q8NES8 71 aa13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 ZNF419Q96HQ0 510 aaPredicted RBP13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 SMIM3Q9BZL3 60 aa13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 CRLF2Q9HC73 371 aa13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 PLCXD1Q9NUJ7 323 aa13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 SSUH2Q9Y2M2 353 aa13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 A0A087WZY1 265 aa13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 A0A0U1RQK1 487 aa13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 SPTY2D1-AS1A0A0U1RR47 76 aa13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 K7EPK0 472 aa13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 ZNF254O75437 659 aa13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 SLC2A1P11166 492 aa13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 SNRPBP14678 240 aaKnown RBP13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 SNRPD2P62316 118 aaKnown RBP13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 DYRK1AQ13627 763 aa13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 LILRA6Q6PI73 481 aa13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 FAM71E2Q8N5Q1 922 aa13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 PIGTQ969N2 578 aa13.51□□□□□ -0.25
PCDHA9-202ENST00000532602 ATAD5Q96QE3 1844 aa13.5□□□□□ -0.25
PCDHA9-202ENST00000532602 DEGS1O15121 323 aa13.5□□□□□ -0.25
PCDHA9-202ENST00000532602 TUSC2O75896 110 aa13.5□□□□□ -0.25
PCDHA9-202ENST00000532602 UBL3O95164 117 aa13.5□□□□□ -0.25
PCDHA9-202ENST00000532602 PTAFRP25105 342 aa13.5□□□□□ -0.25
PCDHA9-202ENST00000532602 TRIM23P36406 574 aa13.5□□□□□ -0.25
PCDHA9-202ENST00000532602 HTR2BP41595 481 aa13.5□□□□□ -0.25
PCDHA9-202ENST00000532602 TEKQ02763 1124 aa13.5□□□□□ -0.25
PCDHA9-202ENST00000532602 EDDM3AQ14507 147 aa13.5□□□□□ -0.25
PCDHA9-202ENST00000532602 KCNJ8Q15842 424 aa13.5□□□□□ -0.25
PCDHA9-202ENST00000532602 PRRX2Q99811 253 aa13.5□□□□□ -0.25
PCDHA9-202ENST00000532602 CHST8Q9H2A9 424 aa13.5□□□□□ -0.25
PCDHA9-202ENST00000532602 GPR55Q9Y2T6 319 aaPredicted RBP13.5□□□□□ -0.25
PCDHA9-202ENST00000532602 ARHGAP33O14559 1287 aa13.5□□□□□ -0.25
PCDHA9-202ENST00000532602 LGI1O95970 557 aa13.5□□□□□ -0.25
PCDHA9-202ENST00000532602 CELA2BP08218 269 aaPredicted RBP13.5□□□□□ -0.25
PCDHA9-202ENST00000532602 PNLIPRP2P54317 469 aa13.5□□□□□ -0.25
PCDHA9-202ENST00000532602 HTR4Q13639 388 aa13.5□□□□□ -0.25
PCDHA9-202ENST00000532602 XKR7Q5GH72 579 aa13.5□□□□□ -0.25
PCDHA9-202ENST00000532602 NANPQ8TBE9 248 aa13.5□□□□□ -0.25
PCDHA9-202ENST00000532602 TMEM43Q9BTV4 400 aa13.5□□□□□ -0.25
PCDHA9-202ENST00000532602 PCDHGA5Q9Y5G8 931 aa13.5□□□□□ -0.25
PCDHA9-202ENST00000532602 SLC16A6O15403 523 aa13.5□□□□□ -0.25
PCDHA9-202ENST00000532602 EMDP50402 254 aa13.5□□□□□ -0.25
PCDHA9-202ENST00000532602 TRA2AQ13595 282 aaKnown RBP eCLIP13.5□□□□□ -0.25
PCDHA9-202ENST00000532602 HEPHL1Q6MZM0 1159 aa13.5□□□□□ -0.25
PCDHA9-202ENST00000532602 SFXN4Q6P4A7 337 aa13.5□□□□□ -0.25
PCDHA9-202ENST00000532602 SLC22A25Q6T423 547 aa13.5□□□□□ -0.25
PCDHA9-202ENST00000532602 CADM4Q8NFZ8 388 aa13.5□□□□□ -0.25
PCDHA9-202ENST00000532602 LGALS14Q8TCE9 139 aa13.5□□□□□ -0.25
PCDHA9-202ENST00000532602 PSD2Q9BQI7 771 aa13.5□□□□□ -0.25
PCDHA9-202ENST00000532602 FAM234AQ9H0X4 552 aa13.5□□□□□ -0.25
PCDHA9-202ENST00000532602 HRH3Q9Y5N1 445 aa13.5□□□□□ -0.25
PCDHA9-202ENST00000532602 NUP205Q92621 2012 aa13.5□□□□□ -0.25
PCDHA9-202ENST00000532602 IGFBP1P08833 259 aaPredicted RBP13.5□□□□□ -0.25
PCDHA9-202ENST00000532602 ENTHD1Q8IYW4 607 aa13.5□□□□□ -0.25
PCDHA9-202ENST00000532602 TP53I13Q8NBR0 393 aaPredicted RBP13.5□□□□□ -0.25
PCDHA9-202ENST00000532602 SMAP2Q8WU79 429 aaPredicted RBP13.5□□□□□ -0.25
PCDHA9-202ENST00000532602 UBE2FQ969M7 185 aa13.5□□□□□ -0.25
PCDHA9-202ENST00000532602 CPNE4Q96A23 557 aaPredicted RBP13.5□□□□□ -0.25
PCDHA9-202ENST00000532602 LINC00615Q96LM1 132 aaPredicted RBP13.5□□□□□ -0.25
PCDHA9-202ENST00000532602 SLC17A4Q9Y2C5 497 aa13.5□□□□□ -0.25
PCDHA9-202ENST00000532602 A0A087WV62 115 aa13.5□□□□□ -0.25
PCDHA9-202ENST00000532602 GSK3AP49840 483 aa13.5□□□□□ -0.25
PCDHA9-202ENST00000532602 CISD2Q8N5K1 135 aaKnown RBP13.5□□□□□ -0.25
PCDHA9-202ENST00000532602 SUMF2Q8NBJ7 301 aa13.5□□□□□ -0.25
PCDHA9-202ENST00000532602 OR11A1Q9GZK7 315 aa13.5□□□□□ -0.25
PCDHA9-202ENST00000532602 SHARPINQ9H0F6 387 aa13.5□□□□□ -0.25
PCDHA9-202ENST00000532602 PSMB1P20618 241 aaKnown RBP13.49□□□□□ -0.25
PCDHA9-202ENST00000532602 NFYBP25208 207 aa13.49□□□□□ -0.25
PCDHA9-202ENST00000532602 RAD52P43351 418 aa13.49□□□□□ -0.25
PCDHA9-202ENST00000532602 SPCS2Q15005 226 aa13.49□□□□□ -0.25
PCDHA9-202ENST00000532602 DESI1Q6ICB0 168 aa13.49□□□□□ -0.25
PCDHA9-202ENST00000532602 DHRS13Q6UX07 377 aa13.49□□□□□ -0.25
PCDHA9-202ENST00000532602 MRGPRX4Q96LA9 322 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms