RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 ZFP36L2P47974 494 aaKnown RBP13.94□□□□□ -0.18
PCDHA3-202ENST00000532566 TAS2R20P59543 309 aa13.94□□□□□ -0.18
PCDHA3-202ENST00000532566 CPEB2Q7Z5Q1 589 aaKnown RBP13.94□□□□□ -0.18
PCDHA3-202ENST00000532566 RDH10Q8IZV5 341 aa13.94□□□□□ -0.18
PCDHA3-202ENST00000532566 CDCP1Q9H5V8 836 aa13.94□□□□□ -0.18
PCDHA3-202ENST00000532566 M0QYG6 137 aa13.94□□□□□ -0.18
PCDHA3-202ENST00000532566 GPR3P46089 330 aa13.94□□□□□ -0.18
PCDHA3-202ENST00000532566 GRB2P62993 217 aaKnown RBP13.94□□□□□ -0.18
PCDHA3-202ENST00000532566 SLC9A3R2Q15599 337 aa13.94□□□□□ -0.18
PCDHA3-202ENST00000532566 CREB3L2Q70SY1 520 aa13.94□□□□□ -0.18
PCDHA3-202ENST00000532566 ANGPTL5Q86XS5 388 aa13.94□□□□□ -0.18
PCDHA3-202ENST00000532566 S1PR5Q9H228 398 aa13.94□□□□□ -0.18
PCDHA3-202ENST00000532566 A0A1W2PPV9 198 aa13.93□□□□□ -0.18
PCDHA3-202ENST00000532566 SMLR1H3BR10 107 aa13.93□□□□□ -0.18
PCDHA3-202ENST00000532566 HRO43593 1189 aa13.93□□□□□ -0.18
PCDHA3-202ENST00000532566 VAMP5O95183 116 aa13.93□□□□□ -0.18
PCDHA3-202ENST00000532566 CNOT4O95628 575 aaKnown RBP13.93□□□□□ -0.18
PCDHA3-202ENST00000532566 ZGLP1P0C6A0 271 aa13.93□□□□□ -0.18
PCDHA3-202ENST00000532566 CD46P15529 392 aa13.93□□□□□ -0.18
PCDHA3-202ENST00000532566 DOC2BQ14184 412 aa13.93□□□□□ -0.18
PCDHA3-202ENST00000532566 MEX3BQ6ZN04 569 aaKnown RBP13.93□□□□□ -0.18
PCDHA3-202ENST00000532566 MFSD4AQ8N468 514 aa13.93□□□□□ -0.18
PCDHA3-202ENST00000532566 ESX1Q8N693 406 aa13.93□□□□□ -0.18
PCDHA3-202ENST00000532566 STK35Q8TDR2 534 aa13.93□□□□□ -0.18
PCDHA3-202ENST00000532566 PAPOLGQ9BWT3 736 aaKnown RBP13.93□□□□□ -0.18
PCDHA3-202ENST00000532566 WWTR1Q9GZV5 400 aa13.93□□□□□ -0.18
PCDHA3-202ENST00000532566 GPR171O14626 319 aa13.93□□□□□ -0.18
PCDHA3-202ENST00000532566 FFAR1O14842 300 aa13.93□□□□□ -0.18
PCDHA3-202ENST00000532566 SERPINE2P07093 398 aa13.93□□□□□ -0.18
PCDHA3-202ENST00000532566 CHRM2P08172 466 aa13.93□□□□□ -0.18
PCDHA3-202ENST00000532566 PMPCAQ10713 525 aa13.93□□□□□ -0.18
PCDHA3-202ENST00000532566 TMEM81Q6P7N7 255 aa13.93□□□□□ -0.18
PCDHA3-202ENST00000532566 ZSCAN1Q8NBB4 408 aa13.93□□□□□ -0.18
PCDHA3-202ENST00000532566 OR5L1Q8NGL2 311 aa13.93□□□□□ -0.18
PCDHA3-202ENST00000532566 ATF6BQ99941 703 aa13.93□□□□□ -0.18
PCDHA3-202ENST00000532566 FBXO34Q9NWN3 711 aa13.93□□□□□ -0.18
PCDHA3-202ENST00000532566 TAS2R4Q9NYW5 299 aa13.93□□□□□ -0.18
PCDHA3-202ENST00000532566 KCNG2Q9UJ96 466 aa13.93□□□□□ -0.18
PCDHA3-202ENST00000532566 FBXL2Q9UKC9 423 aa13.93□□□□□ -0.18
PCDHA3-202ENST00000532566 B3GALT5Q9Y2C3 310 aa13.93□□□□□ -0.18
PCDHA3-202ENST00000532566 PIAS2O75928 621 aa13.93□□□□□ -0.18
PCDHA3-202ENST00000532566 CX3CR1P49238 355 aa13.93□□□□□ -0.18
PCDHA3-202ENST00000532566 MESP2Q0VG99 397 aa13.93□□□□□ -0.18
PCDHA3-202ENST00000532566 CMTM4Q8IZR5 234 aa13.93□□□□□ -0.18
PCDHA3-202ENST00000532566 OR2G2Q8NGZ5 317 aa13.93□□□□□ -0.18
PCDHA3-202ENST00000532566 TRAPPC4Q9Y296 219 aa13.93□□□□□ -0.18
PCDHA3-202ENST00000532566 A0A0D9SG52 128 aa13.93□□□□□ -0.18
PCDHA3-202ENST00000532566 TMEM221A6NGB7 291 aa13.93□□□□□ -0.18
PCDHA3-202ENST00000532566 UBBP0CG47 229 aa13.93□□□□□ -0.18
PCDHA3-202ENST00000532566 EPXP11678 715 aa13.93□□□□□ -0.18
PCDHA3-202ENST00000532566 KIR2DL1P43626 348 aaPredicted RBP13.93□□□□□ -0.18
PCDHA3-202ENST00000532566 SF3B4Q15427 424 aaKnown RBP eCLIP13.93□□□□□ -0.18
PCDHA3-202ENST00000532566 TMEM71Q6P5X7 295 aa13.93□□□□□ -0.18
PCDHA3-202ENST00000532566 RFPL4BQ6ZWI9 263 aa13.93□□□□□ -0.18
PCDHA3-202ENST00000532566 BOLLQ8N9W6 283 aaKnown RBP13.93□□□□□ -0.18
PCDHA3-202ENST00000532566 OR5M1Q8NGP8 315 aa13.93□□□□□ -0.18
PCDHA3-202ENST00000532566 OR5H6Q8NGV6 325 aa13.93□□□□□ -0.18
PCDHA3-202ENST00000532566 PBDC1Q9BVG4 233 aa13.93□□□□□ -0.18
PCDHA3-202ENST00000532566 NUDT9Q9BW91 350 aa13.93□□□□□ -0.18
PCDHA3-202ENST00000532566 OR51B6Q9H340 312 aa13.93□□□□□ -0.18
PCDHA3-202ENST00000532566 ZNF286AQ9HBT8 521 aa13.93□□□□□ -0.18
PCDHA3-202ENST00000532566 NOSIPQ9Y314 301 aaKnown RBP13.93□□□□□ -0.18
PCDHA3-202ENST00000532566 TET1Q8NFU7 2136 aa13.93□□□□□ -0.18
PCDHA3-202ENST00000532566 PIKFYVEQ9Y2I7 2098 aa13.92□□□□□ -0.18
PCDHA3-202ENST00000532566 A0A0B4J203 849 aa13.92□□□□□ -0.18
PCDHA3-202ENST00000532566 FITM1A5D6W6 292 aa13.92□□□□□ -0.18
PCDHA3-202ENST00000532566 ARPC3O15145 178 aa13.92□□□□□ -0.18
PCDHA3-202ENST00000532566 PPP3CBP16298 524 aa13.92□□□□□ -0.18
PCDHA3-202ENST00000532566 SELENBP1Q13228 472 aa13.92□□□□□ -0.18
PCDHA3-202ENST00000532566 ZNF74Q16587 644 aa13.92□□□□□ -0.18
PCDHA3-202ENST00000532566 SPRED2Q7Z698 418 aa13.92□□□□□ -0.18
PCDHA3-202ENST00000532566 FAM109AQ8N4B1 249 aa13.92□□□□□ -0.18
PCDHA3-202ENST00000532566 TMEM185AQ8NFB2 350 aa13.92□□□□□ -0.18
PCDHA3-202ENST00000532566 OR8D4Q8NGM9 314 aa13.92□□□□□ -0.18
PCDHA3-202ENST00000532566 C3orf49Q96BT1 292 aa13.92□□□□□ -0.18
PCDHA3-202ENST00000532566 SLAMF6Q96DU3 332 aa13.92□□□□□ -0.18
PCDHA3-202ENST00000532566 SEC22AQ96IW7 307 aa13.92□□□□□ -0.18
PCDHA3-202ENST00000532566 ANKRD10Q9NXR5 420 aa13.92□□□□□ -0.18
PCDHA3-202ENST00000532566 DNAJB12Q9NXW2 375 aaKnown RBP13.92□□□□□ -0.18
PCDHA3-202ENST00000532566 TRAV1-2A0A0B4J238 106 aa13.92□□□□□ -0.18
PCDHA3-202ENST00000532566 A0A1W2PNR3 127 aa13.92□□□□□ -0.18
PCDHA3-202ENST00000532566 ZNF44P15621 663 aa13.92□□□□□ -0.18
PCDHA3-202ENST00000532566 TGM1P22735 817 aa13.92□□□□□ -0.18
PCDHA3-202ENST00000532566 ZNF684Q5T5D7 378 aa13.92□□□□□ -0.18
PCDHA3-202ENST00000532566 HEPHL1Q6MZM0 1159 aa13.92□□□□□ -0.18
PCDHA3-202ENST00000532566 GLIPR1L1Q6UWM5 242 aa13.92□□□□□ -0.18
PCDHA3-202ENST00000532566 MAML2Q8IZL2 1156 aaPredicted RBP13.92□□□□□ -0.18
PCDHA3-202ENST00000532566 OR51S1Q8NGJ8 323 aa13.92□□□□□ -0.18
PCDHA3-202ENST00000532566 HSD17B8Q92506 261 aa13.92□□□□□ -0.18
PCDHA3-202ENST00000532566 SGCZQ96LD1 299 aa13.92□□□□□ -0.18
PCDHA3-202ENST00000532566 MED29Q9NX70 200 aa13.92□□□□□ -0.18
PCDHA3-202ENST00000532566 ASH2LQ9UBL3 628 aa13.92□□□□□ -0.18
PCDHA3-202ENST00000532566 SLC22A23A1A5C7 686 aa13.92□□□□□ -0.18
PCDHA3-202ENST00000532566 E9PI62 339 aa13.92□□□□□ -0.18
PCDHA3-202ENST00000532566 TRAPPC2LH3BP13 241 aa13.92□□□□□ -0.18
PCDHA3-202ENST00000532566 PMS2P2O95744 297 aa13.92□□□□□ -0.18
PCDHA3-202ENST00000532566 TSPAN15O95858 294 aa13.92□□□□□ -0.18
PCDHA3-202ENST00000532566 RAC2P15153 192 aa13.92□□□□□ -0.18
PCDHA3-202ENST00000532566 CYB561P49447 251 aa13.92□□□□□ -0.18
PCDHA3-202ENST00000532566 RNF4P78317 190 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms