RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 TMIGD3P0DMS9 266 aaPredicted RBP11.22□□□□□ -0.61
SCN3B-206ENST00000530277 FOLR1P15328 257 aa11.22□□□□□ -0.61
SCN3B-206ENST00000530277 DLSTP36957 453 aa11.22□□□□□ -0.61
SCN3B-206ENST00000530277 RBM34P42696 430 aaKnown RBP11.22□□□□□ -0.61
SCN3B-206ENST00000530277 NPY4RP50391 375 aa11.22□□□□□ -0.61
SCN3B-206ENST00000530277 BCL2A1Q16548 175 aa11.22□□□□□ -0.61
SCN3B-206ENST00000530277 PPP1R3BQ86XI6 285 aa11.22□□□□□ -0.61
SCN3B-206ENST00000530277 TMEM185AQ8NFB2 350 aa11.22□□□□□ -0.61
SCN3B-206ENST00000530277 ELP5Q8TE02 316 aa11.22□□□□□ -0.61
SCN3B-206ENST00000530277 ZNF442Q9H7R0 627 aa11.22□□□□□ -0.61
SCN3B-206ENST00000530277 LSM5Q9Y4Y9 91 aaKnown RBP11.22□□□□□ -0.61
SCN3B-206ENST00000530277 FAM221AA4D161 298 aa11.21□□□□□ -0.61
SCN3B-206ENST00000530277 LGALS8O00214 317 aa11.21□□□□□ -0.61
SCN3B-206ENST00000530277 NKX2-2O95096 273 aa11.21□□□□□ -0.61
SCN3B-206ENST00000530277 CBX5P45973 191 aa11.21□□□□□ -0.61
SCN3B-206ENST00000530277 MNX1P50219 401 aaPredicted RBP11.21□□□□□ -0.61
SCN3B-206ENST00000530277 CLDN20P56880 219 aa11.21□□□□□ -0.61
SCN3B-206ENST00000530277 NHLRC1Q6VVB1 395 aa11.21□□□□□ -0.61
SCN3B-206ENST00000530277 TMPRSS11FQ6ZWK6 438 aa11.21□□□□□ -0.61
SCN3B-206ENST00000530277 ANGPTL5Q86XS5 388 aa11.21□□□□□ -0.61
SCN3B-206ENST00000530277 FBLIM1Q8WUP2 373 aa11.21□□□□□ -0.61
SCN3B-206ENST00000530277 ANKRD9Q96BM1 317 aaPredicted RBP11.21□□□□□ -0.61
SCN3B-206ENST00000530277 SIGLEC11Q96RL6 698 aa11.21□□□□□ -0.61
SCN3B-206ENST00000530277 HS3ST3A1Q9Y663 406 aa11.21□□□□□ -0.61
SCN3B-206ENST00000530277 A0A087WUJ7 227 aa11.21□□□□□ -0.61
SCN3B-206ENST00000530277 A0A087WV62 115 aa11.21□□□□□ -0.61
SCN3B-206ENST00000530277 LOC107986453A0A1B0GWG9 222 aa11.21□□□□□ -0.61
SCN3B-206ENST00000530277 HSPA12AO43301 675 aa11.21□□□□□ -0.61
SCN3B-206ENST00000530277 ADRB1P08588 477 aa11.21□□□□□ -0.61
SCN3B-206ENST00000530277 ZNF806P0C7X5 589 aa11.21□□□□□ -0.61
SCN3B-206ENST00000530277 EDN3P14138 238 aa11.21□□□□□ -0.61
SCN3B-206ENST00000530277 M6PRP20645 277 aa11.21□□□□□ -0.61
SCN3B-206ENST00000530277 ZNF616Q08AN1 781 aa11.21□□□□□ -0.61
SCN3B-206ENST00000530277 C2orf76Q3KRA6 126 aa11.21□□□□□ -0.61
SCN3B-206ENST00000530277 YIF1BQ5BJH7 314 aa11.21□□□□□ -0.61
SCN3B-206ENST00000530277 TMEM81Q6P7N7 255 aa11.21□□□□□ -0.61
SCN3B-206ENST00000530277 OR6V1Q8N148 313 aa11.21□□□□□ -0.61
SCN3B-206ENST00000530277 OR51E1Q8TCB6 317 aa11.21□□□□□ -0.61
SCN3B-206ENST00000530277 ZNF436Q9C0F3 470 aaPredicted RBP11.21□□□□□ -0.61
SCN3B-206ENST00000530277 NOTCH4Q99466 2003 aa11.21□□□□□ -0.62
SCN3B-206ENST00000530277 SNRNP200O75643 2136 aaKnown RBP11.21□□□□□ -0.62
SCN3B-206ENST00000530277 TMEM212A6NML5 194 aa11.21□□□□□ -0.62
SCN3B-206ENST00000530277 BHLHE40O14503 412 aa11.21□□□□□ -0.62
SCN3B-206ENST00000530277 DBHP09172 617 aa11.21□□□□□ -0.62
SCN3B-206ENST00000530277 HOXB9P17482 250 aaPredicted RBP11.21□□□□□ -0.62
SCN3B-206ENST00000530277 NFYAP23511 347 aaPredicted RBP11.21□□□□□ -0.62
SCN3B-206ENST00000530277 CD27P26842 260 aa11.21□□□□□ -0.62
SCN3B-206ENST00000530277 ST3GAL2Q16842 350 aa11.21□□□□□ -0.62
SCN3B-206ENST00000530277 PTCRAQ6ISU1 281 aaPredicted RBP11.21□□□□□ -0.62
SCN3B-206ENST00000530277 MEX3BQ6ZN04 569 aaKnown RBP11.21□□□□□ -0.62
SCN3B-206ENST00000530277 ARIH2OSQ8N7S6 290 aa11.21□□□□□ -0.62
SCN3B-206ENST00000530277 CCDC74AQ96AQ1 378 aa11.21□□□□□ -0.62
SCN3B-206ENST00000530277 MIB2Q96AX9 1013 aa11.21□□□□□ -0.62
SCN3B-206ENST00000530277 URM1Q9BTM9 101 aaKnown RBP11.21□□□□□ -0.62
SCN3B-206ENST00000530277 NARFLQ9H6Q4 476 aa11.21□□□□□ -0.62
SCN3B-206ENST00000530277 TAS2R8Q9NYW2 309 aa11.21□□□□□ -0.62
SCN3B-206ENST00000530277 C14orf166Q9Y224 244 aaKnown RBP11.21□□□□□ -0.62
SCN3B-206ENST00000530277 M0R036 132 aa11.2□□□□□ -0.62
SCN3B-206ENST00000530277 CYR61O00622 381 aa11.2□□□□□ -0.62
SCN3B-206ENST00000530277 SIGLEC6O43699 453 aa11.2□□□□□ -0.62
SCN3B-206ENST00000530277 RAB40ALP0C0E4 278 aa11.2□□□□□ -0.62
SCN3B-206ENST00000530277 RAB3AP20336 220 aa11.2□□□□□ -0.62
SCN3B-206ENST00000530277 POLR2HP52434 150 aaKnown RBP11.2□□□□□ -0.62
SCN3B-206ENST00000530277 OR52W1Q6IF63 320 aa11.2□□□□□ -0.62
SCN3B-206ENST00000530277 OR5H2Q8NGV7 314 aa11.2□□□□□ -0.62
SCN3B-206ENST00000530277 ZFAND1Q8TCF1 268 aa11.2□□□□□ -0.62
SCN3B-206ENST00000530277 PAQR8Q8TEZ7 354 aa11.2□□□□□ -0.62
SCN3B-206ENST00000530277 RAB40AQ8WXH6 277 aa11.2□□□□□ -0.62
SCN3B-206ENST00000530277 HIST1H2AAQ96QV6 131 aa11.2□□□□□ -0.62
SCN3B-206ENST00000530277 OR52A1Q9UKL2 312 aa11.2□□□□□ -0.62
SCN3B-206ENST00000530277 LSM2Q9Y333 95 aaKnown RBP11.2□□□□□ -0.62
SCN3B-206ENST00000530277 PCDHGA1Q9Y5H4 931 aa11.2□□□□□ -0.62
SCN3B-206ENST00000530277 A0A0B4J2A0 478 aa11.2□□□□□ -0.62
SCN3B-206ENST00000530277 A8MVM7 634 aa11.2□□□□□ -0.62
SCN3B-206ENST00000530277 PYCARD-AS1I3L0S3 204 aa11.2□□□□□ -0.62
SCN3B-206ENST00000530277 DCTN6O00399 190 aa11.2□□□□□ -0.62
SCN3B-206ENST00000530277 OR2J2O76002 312 aa11.2□□□□□ -0.62
SCN3B-206ENST00000530277 HPXP02790 462 aa11.2□□□□□ -0.62
SCN3B-206ENST00000530277 SERPINA5P05154 406 aa11.2□□□□□ -0.62
SCN3B-206ENST00000530277 S100A6P06703 90 aa11.2□□□□□ -0.62
SCN3B-206ENST00000530277 CSF1P09603 554 aa11.2□□□□□ -0.62
SCN3B-206ENST00000530277 LIMS1P48059 325 aa11.2□□□□□ -0.62
SCN3B-206ENST00000530277 ZNF117Q03924 483 aa11.2□□□□□ -0.62
SCN3B-206ENST00000530277 RBMS2Q15434 407 aaKnown RBP11.2□□□□□ -0.62
SCN3B-206ENST00000530277 ELAVL1Q15717 326 aaKnown RBP11.2□□□□□ -0.62
SCN3B-206ENST00000530277 CCDC36Q8IYA8 594 aa11.2□□□□□ -0.62
SCN3B-206ENST00000530277 IL22RA1Q8N6P7 574 aa11.2□□□□□ -0.62
SCN3B-206ENST00000530277 ZNF680Q8NEM1 530 aa11.2□□□□□ -0.62
SCN3B-206ENST00000530277 NT5CQ8TCD5 201 aa11.2□□□□□ -0.62
SCN3B-206ENST00000530277 KIAA1143Q96AT1 154 aaPredicted RBP11.2□□□□□ -0.62
SCN3B-206ENST00000530277 SHPKQ9UHJ6 478 aa11.2□□□□□ -0.62
SCN3B-206ENST00000530277 SLC5A6Q9Y289 635 aa11.2□□□□□ -0.62
SCN3B-206ENST00000530277 GPR171O14626 319 aa11.2□□□□□ -0.62
SCN3B-206ENST00000530277 TBX19O60806 448 aa11.2□□□□□ -0.62
SCN3B-206ENST00000530277 RECKO95980 971 aa11.2□□□□□ -0.62
SCN3B-206ENST00000530277 IFNA21P01568 189 aa11.2□□□□□ -0.62
SCN3B-206ENST00000530277 PPICP45877 212 aa11.2□□□□□ -0.62
SCN3B-206ENST00000530277 AFF3P51826 1226 aaKnown RBP11.2□□□□□ -0.62
SCN3B-206ENST00000530277 RPL27P61353 136 aaKnown RBP11.2□□□□□ -0.62
SCN3B-206ENST00000530277 BHLHE23Q8NDY6 225 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms