RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 HCAR1Q9BXC0 346 aa12.23□□□□□ -0.45
USF1-209ENST00000529476 TEX12Q9BXU0 123 aa12.23□□□□□ -0.45
USF1-209ENST00000529476 NMNAT2Q9BZQ4 307 aa12.23□□□□□ -0.45
USF1-209ENST00000529476 RACGAP1Q9H0H5 632 aa12.23□□□□□ -0.45
USF1-209ENST00000529476 SIAEQ9HAT2 523 aa12.23□□□□□ -0.45
USF1-209ENST00000529476 NOX3Q9HBY0 568 aa12.23□□□□□ -0.45
USF1-209ENST00000529476 EMC7Q9NPA0 242 aa12.23□□□□□ -0.45
USF1-209ENST00000529476 OBP2BQ9NPH6 170 aa12.23□□□□□ -0.45
USF1-209ENST00000529476 POLE4Q9NR33 117 aa12.23□□□□□ -0.45
USF1-209ENST00000529476 NPAP1Q9NZP6 1156 aa12.23□□□□□ -0.45
USF1-209ENST00000529476 FKBP7Q9Y680 259 aa12.23□□□□□ -0.45
USF1-209ENST00000529476 AKAP9Q99996 3911 aa12.22□□□□□ -0.45
USF1-209ENST00000529476 SIAH2O43255 324 aa12.22□□□□□ -0.45
USF1-209ENST00000529476 PRKYO43930 277 aa12.22□□□□□ -0.45
USF1-209ENST00000529476 FARS2O95363 451 aaKnown RBP12.22□□□□□ -0.45
USF1-209ENST00000529476 WNT11O96014 354 aa12.22□□□□□ -0.45
USF1-209ENST00000529476 GYPBP06028 91 aa12.22□□□□□ -0.45
USF1-209ENST00000529476 CLUP10909 449 aa12.22□□□□□ -0.45
USF1-209ENST00000529476 CD79AP11912 226 aa12.22□□□□□ -0.45
USF1-209ENST00000529476 NPR2P20594 1047 aa12.22□□□□□ -0.45
USF1-209ENST00000529476 ZNF83P51522 516 aa12.22□□□□□ -0.45
USF1-209ENST00000529476 SLC25A1P53007 311 aa12.22□□□□□ -0.45
USF1-209ENST00000529476 PIGFQ07326 219 aa12.22□□□□□ -0.45
USF1-209ENST00000529476 DAZAP2Q15038 168 aaPredicted RBP12.22□□□□□ -0.45
USF1-209ENST00000529476 NRN1LQ496H8 165 aa12.22□□□□□ -0.45
USF1-209ENST00000529476 FAM27BQ5VT28 67 aa12.22□□□□□ -0.45
USF1-209ENST00000529476 PLBD1Q6P4A8 553 aa12.22□□□□□ -0.45
USF1-209ENST00000529476 UGT2A3Q6UWM9 527 aa12.22□□□□□ -0.45
USF1-209ENST00000529476 ZNF295-AS1Q8N0V1 137 aa12.22□□□□□ -0.45
USF1-209ENST00000529476 PROKR2Q8NFJ6 384 aa12.22□□□□□ -0.45
USF1-209ENST00000529476 OR51L1Q8NGJ5 315 aa12.22□□□□□ -0.45
USF1-209ENST00000529476 OR2T4Q8NH00 348 aa12.22□□□□□ -0.45
USF1-209ENST00000529476 PTP4A1Q93096 173 aa12.22□□□□□ -0.45
USF1-209ENST00000529476 GRIP2Q9C0E4 1043 aa12.22□□□□□ -0.45
USF1-209ENST00000529476 HINT3Q9NQE9 182 aaKnown RBP12.22□□□□□ -0.45
USF1-209ENST00000529476 B3GNT2Q9NY97 397 aa12.22□□□□□ -0.45
USF1-209ENST00000529476 DEFB108AA8MXU0 73 aa12.21□□□□□ -0.45
USF1-209ENST00000529476 PRR23D1E9PI22 279 aaPredicted RBP12.21□□□□□ -0.45
USF1-209ENST00000529476 E9PQ18 207 aa12.21□□□□□ -0.45
USF1-209ENST00000529476 DLGAP1O14490 977 aa12.21□□□□□ -0.45
USF1-209ENST00000529476 ATP6V1G2O95670 118 aa12.21□□□□□ -0.45
USF1-209ENST00000529476 PRR23D2P0DMB1 279 aaPredicted RBP12.21□□□□□ -0.45
USF1-209ENST00000529476 GAAP10253 952 aa12.21□□□□□ -0.45
USF1-209ENST00000529476 SPI1P17947 270 aa12.21□□□□□ -0.45
USF1-209ENST00000529476 MSR1P21757 451 aa12.21□□□□□ -0.45
USF1-209ENST00000529476 PAICSP22234 425 aaKnown RBP12.21□□□□□ -0.45
USF1-209ENST00000529476 GUCA1AP43080 201 aaPredicted RBP12.21□□□□□ -0.45
USF1-209ENST00000529476 RIPK1Q13546 671 aa12.21□□□□□ -0.45
USF1-209ENST00000529476 ENDOGQ14249 297 aaKnown RBP12.21□□□□□ -0.45
USF1-209ENST00000529476 MEP1BQ16820 701 aa12.21□□□□□ -0.45
USF1-209ENST00000529476 SSX8Q7RTT4 187 aa12.21□□□□□ -0.45
USF1-209ENST00000529476 SLC16A14Q7RTX9 510 aa12.21□□□□□ -0.45
USF1-209ENST00000529476 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.21□□□□□ -0.45
USF1-209ENST00000529476 MDP1Q86V88 176 aa12.21□□□□□ -0.45
USF1-209ENST00000529476 CPOQ8IVL8 374 aa12.21□□□□□ -0.45
USF1-209ENST00000529476 CCDC36Q8IYA8 594 aa12.21□□□□□ -0.45
USF1-209ENST00000529476 PACRGLQ8N7B6 248 aa12.21□□□□□ -0.45
USF1-209ENST00000529476 BBS1Q8NFJ9 593 aa12.21□□□□□ -0.45
USF1-209ENST00000529476 NRG4Q8WWG1 115 aa12.21□□□□□ -0.45
USF1-209ENST00000529476 NANOS1Q8WY41 292 aaKnown RBP12.21□□□□□ -0.45
USF1-209ENST00000529476 C11orf40Q8WZ69 217 aa12.21□□□□□ -0.45
USF1-209ENST00000529476 FBXO17Q96EF6 278 aa12.21□□□□□ -0.45
USF1-209ENST00000529476 ZNF416Q9BWM5 594 aa12.21□□□□□ -0.45
USF1-209ENST00000529476 PRRG3Q9BZD7 231 aa12.21□□□□□ -0.45
USF1-209ENST00000529476 C8orf4Q9NR00 106 aa12.21□□□□□ -0.45
USF1-209ENST00000529476 SMPD3Q9NY59 655 aaPredicted RBP12.21□□□□□ -0.45
USF1-209ENST00000529476 ITGB1BP2Q9UKP3 347 aa12.21□□□□□ -0.45
USF1-209ENST00000529476 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.2□□□□□ -0.46
USF1-209ENST00000529476 DPRXA6NFQ7 191 aa12.2□□□□□ -0.46
USF1-209ENST00000529476 A6NNC1 897 aa12.2□□□□□ -0.46
USF1-209ENST00000529476 M0R1B8 84 aa12.2□□□□□ -0.46
USF1-209ENST00000529476 UBL3O95164 117 aa12.2□□□□□ -0.46
USF1-209ENST00000529476 HLA-DQA2P01906 255 aa12.2□□□□□ -0.46
USF1-209ENST00000529476 TFP02787 698 aa12.2□□□□□ -0.46
USF1-209ENST00000529476 CELA3BP08861 270 aa12.2□□□□□ -0.46
USF1-209ENST00000529476 CST2P09228 141 aa12.2□□□□□ -0.46
USF1-209ENST00000529476 CBR1P16152 277 aa12.2□□□□□ -0.46
USF1-209ENST00000529476 PTDSS1P48651 473 aaKnown RBP12.2□□□□□ -0.46
USF1-209ENST00000529476 EFNB1P98172 346 aa12.2□□□□□ -0.46
USF1-209ENST00000529476 HSF2Q03933 536 aa12.2□□□□□ -0.46
USF1-209ENST00000529476 GLO1Q04760 184 aa12.2□□□□□ -0.46
USF1-209ENST00000529476 KCNMB1Q16558 191 aa12.2□□□□□ -0.46
USF1-209ENST00000529476 GSG1Q2KHT4 349 aa12.2□□□□□ -0.46
USF1-209ENST00000529476 C1QTNF12Q5T7M4 302 aa12.2□□□□□ -0.46
USF1-209ENST00000529476 LYPD4Q6UWN0 246 aa12.2□□□□□ -0.46
USF1-209ENST00000529476 CXXC5Q7LFL8 322 aaKnown RBP12.2□□□□□ -0.46
USF1-209ENST00000529476 TCEANCQ8N8B7 351 aa12.2□□□□□ -0.46
USF1-209ENST00000529476 SLC26A10Q8NG04 563 aa12.2□□□□□ -0.46
USF1-209ENST00000529476 PIK3IP1Q96FE7 263 aa12.2□□□□□ -0.46
USF1-209ENST00000529476 PLPPR2Q96GM1 343 aa12.2□□□□□ -0.46
USF1-209ENST00000529476 HRASLS5Q96KN8 279 aa12.2□□□□□ -0.46
USF1-209ENST00000529476 IL4I1Q96RQ9 567 aa12.2□□□□□ -0.46
USF1-209ENST00000529476 OR51V1Q9H2C8 321 aa12.2□□□□□ -0.46
USF1-209ENST00000529476 RNF121Q9H920 327 aa12.2□□□□□ -0.46
USF1-209ENST00000529476 NGBQ9NPG2 151 aa12.2□□□□□ -0.46
USF1-209ENST00000529476 FAM118AQ9NWS6 357 aa12.2□□□□□ -0.46
USF1-209ENST00000529476 CRNNQ9UBG3 495 aaPredicted RBP12.2□□□□□ -0.46
USF1-209ENST00000529476 IGHV1-18A0A0C4DH31 117 aa12.19□□□□□ -0.46
USF1-209ENST00000529476 TVP23AA6NH52 213 aa12.19□□□□□ -0.46
USF1-209ENST00000529476 TLX2O43763 284 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms