RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 RASD2Q96D21 266 aa13.36□□□□□ -0.27
CAPN1-213ENST00000527897 RSRC1Q96IZ7 334 aaKnown RBP13.36□□□□□ -0.27
CAPN1-213ENST00000527897 MYOZ1Q9NP98 299 aaPredicted RBP13.36□□□□□ -0.27
CAPN1-213ENST00000527897 CD300AQ9UGN4 299 aa13.36□□□□□ -0.27
CAPN1-213ENST00000527897 ADAM21Q9UKJ8 722 aa13.36□□□□□ -0.27
CAPN1-213ENST00000527897 ANK3Q12955 4377 aaKnown RBP13.36□□□□□ -0.27
CAPN1-213ENST00000527897 YLPM1P49750 1951 aaKnown RBP13.36□□□□□ -0.27
CAPN1-213ENST00000527897 SLC22A23A1A5C7 686 aa13.35□□□□□ -0.27
CAPN1-213ENST00000527897 C5orf49A4QMS7 147 aa13.35□□□□□ -0.27
CAPN1-213ENST00000527897 UNC119BA6NIH7 251 aa13.35□□□□□ -0.27
CAPN1-213ENST00000527897 B2RBV5 119 aa13.35□□□□□ -0.27
CAPN1-213ENST00000527897 LYNX1G3V0Z9 82 aa13.35□□□□□ -0.27
CAPN1-213ENST00000527897 NDUFS8O00217 210 aa13.35□□□□□ -0.27
CAPN1-213ENST00000527897 DYNC1I1O14576 645 aa13.35□□□□□ -0.27
CAPN1-213ENST00000527897 TLX2O43763 284 aaPredicted RBP13.35□□□□□ -0.27
CAPN1-213ENST00000527897 NDUFB2O95178 105 aa13.35□□□□□ -0.27
CAPN1-213ENST00000527897 CLPTM1O96005 669 aa13.35□□□□□ -0.27
CAPN1-213ENST00000527897 FABP3P05413 133 aa13.35□□□□□ -0.27
CAPN1-213ENST00000527897 LYNX1P0DP58 116 aa13.35□□□□□ -0.27
CAPN1-213ENST00000527897 NAT2P11245 290 aa13.35□□□□□ -0.27
CAPN1-213ENST00000527897 STOMP27105 288 aa13.35□□□□□ -0.27
CAPN1-213ENST00000527897 OMPP47874 163 aa13.35□□□□□ -0.27
CAPN1-213ENST00000527897 MNAT1P51948 309 aa13.35□□□□□ -0.27
CAPN1-213ENST00000527897 SELENOVP59797 346 aa13.35□□□□□ -0.27
CAPN1-213ENST00000527897 KRR1Q13601 381 aaKnown RBP13.35□□□□□ -0.27
CAPN1-213ENST00000527897 MESTQ5EB52 335 aa13.35□□□□□ -0.27
CAPN1-213ENST00000527897 CYP2R1Q6VVX0 501 aa13.35□□□□□ -0.27
CAPN1-213ENST00000527897 FITM2Q8N6M3 262 aa13.35□□□□□ -0.27
CAPN1-213ENST00000527897 CPEB3Q8NE35 698 aaKnown RBP13.35□□□□□ -0.27
CAPN1-213ENST00000527897 UBASH3BQ8TF42 649 aa13.35□□□□□ -0.27
CAPN1-213ENST00000527897 BPESC1Q9GZL8 116 aa13.35□□□□□ -0.27
CAPN1-213ENST00000527897 EMC7Q9NPA0 242 aa13.35□□□□□ -0.27
CAPN1-213ENST00000527897 TAAR3PQ9P1P4 343 aa13.35□□□□□ -0.27
CAPN1-213ENST00000527897 SIGLEC7Q9Y286 467 aa13.35□□□□□ -0.27
CAPN1-213ENST00000527897 IER3IP1Q9Y5U9 82 aa13.35□□□□□ -0.27
CAPN1-213ENST00000527897 JMJD1CQ15652 2540 aa13.35□□□□□ -0.27
CAPN1-213ENST00000527897 A8MV72 311 aaPredicted RBP13.34□□□□□ -0.27
CAPN1-213ENST00000527897 SOCS2O14508 198 aa13.34□□□□□ -0.27
CAPN1-213ENST00000527897 MGRN1O60291 552 aa13.34□□□□□ -0.27
CAPN1-213ENST00000527897 STAMBPO95630 424 aa13.34□□□□□ -0.27
CAPN1-213ENST00000527897 IGFBP1P08833 259 aaPredicted RBP13.34□□□□□ -0.27
CAPN1-213ENST00000527897 APEHP13798 732 aaKnown RBP13.34□□□□□ -0.27
CAPN1-213ENST00000527897 ZNF16P17020 682 aaPredicted RBP13.34□□□□□ -0.27
CAPN1-213ENST00000527897 MSR1P21757 451 aa13.34□□□□□ -0.27
CAPN1-213ENST00000527897 RAD52P43351 418 aa13.34□□□□□ -0.27
CAPN1-213ENST00000527897 LIMS1P48059 325 aa13.34□□□□□ -0.27
CAPN1-213ENST00000527897 EVX1P49640 407 aa13.34□□□□□ -0.27
CAPN1-213ENST00000527897 GDI2P50395 445 aaKnown RBP13.34□□□□□ -0.27
CAPN1-213ENST00000527897 UCP2P55851 309 aa13.34□□□□□ -0.27
CAPN1-213ENST00000527897 KLF3P57682 345 aaPredicted RBP13.34□□□□□ -0.27
CAPN1-213ENST00000527897 SMIM11AP58511 58 aa13.34□□□□□ -0.27
CAPN1-213ENST00000527897 PSG4Q00888 419 aa13.34□□□□□ -0.27
CAPN1-213ENST00000527897 GLO1Q04760 184 aa13.34□□□□□ -0.27
CAPN1-213ENST00000527897 SPATA46Q5T0L3 261 aa13.34□□□□□ -0.27
CAPN1-213ENST00000527897 C6orf52Q5T4I8 152 aa13.34□□□□□ -0.27
CAPN1-213ENST00000527897 FAM27BQ5VT28 67 aa13.34□□□□□ -0.27
CAPN1-213ENST00000527897 THSD4Q6ZMP0 1018 aa13.34□□□□□ -0.27
CAPN1-213ENST00000527897 ZDHHC21Q8IVQ6 265 aa13.34□□□□□ -0.27
CAPN1-213ENST00000527897 CCDC197Q8NCU1 140 aa13.34□□□□□ -0.27
CAPN1-213ENST00000527897 OR1J1Q8NGS3 322 aa13.34□□□□□ -0.27
CAPN1-213ENST00000527897 SYNPRQ8TBG9 265 aa13.34□□□□□ -0.27
CAPN1-213ENST00000527897 C11orf40Q8WZ69 217 aa13.34□□□□□ -0.27
CAPN1-213ENST00000527897 NSL1Q96IY1 281 aa13.34□□□□□ -0.27
CAPN1-213ENST00000527897 MS4A5Q9H3V2 200 aa13.34□□□□□ -0.27
CAPN1-213ENST00000527897 EIF3KQ9UBQ5 218 aaKnown RBP13.34□□□□□ -0.27
CAPN1-213ENST00000527897 IGHV4-61A0A0C4DH41 118 aa13.33□□□□□ -0.28
CAPN1-213ENST00000527897 PRSS37A4D1T9 235 aa13.33□□□□□ -0.28
CAPN1-213ENST00000527897 VWC2LB2RUY7 222 aa13.33□□□□□ -0.28
CAPN1-213ENST00000527897 OR10H3O60404 316 aa13.33□□□□□ -0.28
CAPN1-213ENST00000527897 CRLF1O75462 422 aa13.33□□□□□ -0.28
CAPN1-213ENST00000527897 SNAP29O95721 258 aa13.33□□□□□ -0.28
CAPN1-213ENST00000527897 SEMG1P04279 462 aa13.33□□□□□ -0.28
CAPN1-213ENST00000527897 SCG5P05408 212 aa13.33□□□□□ -0.28
CAPN1-213ENST00000527897 CST2P09228 141 aa13.33□□□□□ -0.28
CAPN1-213ENST00000527897 IGHV4-31P0DP07 118 aa13.33□□□□□ -0.28
CAPN1-213ENST00000527897 SDHAP31040 664 aa13.33□□□□□ -0.28
CAPN1-213ENST00000527897 RRM2P31350 389 aa13.33□□□□□ -0.28
CAPN1-213ENST00000527897 CENPAP49450 140 aa13.33□□□□□ -0.28
CAPN1-213ENST00000527897 PCBD1P61457 104 aa13.33□□□□□ -0.28
CAPN1-213ENST00000527897 OTPQ5XKR4 325 aa13.33□□□□□ -0.28
CAPN1-213ENST00000527897 CYB5R2Q6BCY4 276 aa13.33□□□□□ -0.28
CAPN1-213ENST00000527897 ZNF774Q6NX45 483 aa13.33□□□□□ -0.28
CAPN1-213ENST00000527897 UGT2A3Q6UWM9 527 aa13.33□□□□□ -0.28
CAPN1-213ENST00000527897 FAM122BQ7Z309 247 aa13.33□□□□□ -0.28
CAPN1-213ENST00000527897 PRIMA1Q86XR5 153 aa13.33□□□□□ -0.28
CAPN1-213ENST00000527897 ALDH16A1Q8IZ83 802 aa13.33□□□□□ -0.28
CAPN1-213ENST00000527897 ZNF540Q8NDQ6 660 aa13.33□□□□□ -0.28
CAPN1-213ENST00000527897 FANK1Q8TC84 345 aa13.33□□□□□ -0.28
CAPN1-213ENST00000527897 DHRS1Q96LJ7 313 aa13.33□□□□□ -0.28
CAPN1-213ENST00000527897 GPA33Q99795 319 aa13.33□□□□□ -0.28
CAPN1-213ENST00000527897 ZNF416Q9BWM5 594 aa13.33□□□□□ -0.28
CAPN1-213ENST00000527897 BCL2L14Q9BZR8 327 aa13.33□□□□□ -0.28
CAPN1-213ENST00000527897 OR2H1Q9GZK4 316 aa13.33□□□□□ -0.28
CAPN1-213ENST00000527897 WNT5BQ9H1J7 359 aa13.33□□□□□ -0.28
CAPN1-213ENST00000527897 SYT4Q9H2B2 425 aa13.33□□□□□ -0.28
CAPN1-213ENST00000527897 POLE4Q9NR33 117 aa13.33□□□□□ -0.28
CAPN1-213ENST00000527897 TMCC3Q9ULS5 477 aa13.33□□□□□ -0.28
CAPN1-213ENST00000527897 TIMM10BQ9Y5J6 103 aa13.33□□□□□ -0.28
CAPN1-213ENST00000527897 LOC100509620A0A075B734 347 aa13.32□□□□□ -0.28
CAPN1-213ENST00000527897 LRP5LA4QPB2 252 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms