RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 SH3GL3Q99963 347 aa18.09■□□□□ 0.49
CD44-222ENST00000526025 TMEM204Q9BSN7 226 aa18.09■□□□□ 0.49
CD44-222ENST00000526025 GRIP2Q9C0E4 1043 aa18.09■□□□□ 0.49
CD44-222ENST00000526025 RIBC2Q9H4K1 309 aa18.09■□□□□ 0.49
CD44-222ENST00000526025 CELSR2Q9HCU4 2923 aa18.09■□□□□ 0.49
CD44-222ENST00000526025 PLCE1Q9P212 2302 aa18.09■□□□□ 0.49
CD44-222ENST00000526025 DCHS2Q6V1P9 2916 aa18.09■□□□□ 0.49
CD44-222ENST00000526025 C12orf71A8MTZ7 269 aa18.08■□□□□ 0.48
CD44-222ENST00000526025 MMP7P09237 267 aaPredicted RBP18.08■□□□□ 0.48
CD44-222ENST00000526025 SPI1P17947 270 aa18.08■□□□□ 0.48
CD44-222ENST00000526025 CAPZA2P47755 286 aa18.08■□□□□ 0.48
CD44-222ENST00000526025 HSF2Q03933 536 aa18.08■□□□□ 0.48
CD44-222ENST00000526025 SLC34A1Q06495 639 aa18.08■□□□□ 0.48
CD44-222ENST00000526025 SNAPC1Q16533 368 aa18.08■□□□□ 0.48
CD44-222ENST00000526025 OGFRL1Q5TC84 451 aaPredicted RBP18.08■□□□□ 0.48
CD44-222ENST00000526025 TMEM53Q6P2H8 277 aa18.08■□□□□ 0.48
CD44-222ENST00000526025 MDP1Q86V88 176 aa18.08■□□□□ 0.48
CD44-222ENST00000526025 SLC26A10Q8NG04 563 aa18.08■□□□□ 0.48
CD44-222ENST00000526025 PLPPR2Q96GM1 343 aa18.08■□□□□ 0.48
CD44-222ENST00000526025 RADILQ96JH8 1075 aa18.08■□□□□ 0.48
CD44-222ENST00000526025 HRASLS5Q96KN8 279 aa18.08■□□□□ 0.48
CD44-222ENST00000526025 ZNF75AQ96N20 296 aa18.08■□□□□ 0.48
CD44-222ENST00000526025 TVP23BQ9NYZ1 205 aa18.08■□□□□ 0.48
CD44-222ENST00000526025 KCNG2Q9UJ96 466 aa18.08■□□□□ 0.48
CD44-222ENST00000526025 MOKQ9UQ07 419 aa18.08■□□□□ 0.48
CD44-222ENST00000526025 DPRXA6NFQ7 191 aa18.07■□□□□ 0.48
CD44-222ENST00000526025 PRR23D1E9PI22 279 aaPredicted RBP18.07■□□□□ 0.48
CD44-222ENST00000526025 PRODHO43272 600 aa18.07■□□□□ 0.48
CD44-222ENST00000526025 RAB36O95755 333 aa18.07■□□□□ 0.48
CD44-222ENST00000526025 PRR23D2P0DMB1 279 aaPredicted RBP18.07■□□□□ 0.48
CD44-222ENST00000526025 CD79AP11912 226 aa18.07■□□□□ 0.48
CD44-222ENST00000526025 CD40P25942 277 aa18.07■□□□□ 0.48
CD44-222ENST00000526025 PEX2P28328 305 aa18.07■□□□□ 0.48
CD44-222ENST00000526025 ZNF83P51522 516 aa18.07■□□□□ 0.48
CD44-222ENST00000526025 RAB1AP62820 205 aa18.07■□□□□ 0.48
CD44-222ENST00000526025 TUBA1BP68363 451 aa18.07■□□□□ 0.48
CD44-222ENST00000526025 TUBA4AP68366 448 aa18.07■□□□□ 0.48
CD44-222ENST00000526025 EFNB1P98172 346 aa18.07■□□□□ 0.48
CD44-222ENST00000526025 TLE4Q04727 773 aa18.07■□□□□ 0.48
CD44-222ENST00000526025 ENDOGQ14249 297 aaKnown RBP18.07■□□□□ 0.48
CD44-222ENST00000526025 TUBA1AQ71U36 451 aa18.07■□□□□ 0.48
CD44-222ENST00000526025 PROKR2Q8NFJ6 384 aa18.07■□□□□ 0.48
CD44-222ENST00000526025 IL17RDQ8NFM7 739 aa18.07■□□□□ 0.48
CD44-222ENST00000526025 PTP4A1Q93096 173 aa18.07■□□□□ 0.48
CD44-222ENST00000526025 ZNF416Q9BWM5 594 aa18.07■□□□□ 0.48
CD44-222ENST00000526025 C1orf198Q9H425 327 aa18.07■□□□□ 0.48
CD44-222ENST00000526025 RERGLQ9H628 205 aa18.07■□□□□ 0.48
CD44-222ENST00000526025 IGHV1-18A0A0C4DH31 117 aa18.06■□□□□ 0.48
CD44-222ENST00000526025 SCG5P05408 212 aa18.06■□□□□ 0.48
CD44-222ENST00000526025 CD3EP07766 207 aa18.06■□□□□ 0.48
CD44-222ENST00000526025 ZNF14P17017 642 aaPredicted RBP18.06■□□□□ 0.48
CD44-222ENST00000526025 POLR2IP36954 125 aaKnown RBP18.06■□□□□ 0.48
CD44-222ENST00000526025 BSPH1Q075Z2 132 aa18.06■□□□□ 0.48
CD44-222ENST00000526025 AQP6Q13520 282 aa18.06■□□□□ 0.48
CD44-222ENST00000526025 LRRC18Q8N456 261 aa18.06■□□□□ 0.48
CD44-222ENST00000526025 C11orf40Q8WZ69 217 aa18.06■□□□□ 0.48
CD44-222ENST00000526025 FBXO17Q96EF6 278 aa18.06■□□□□ 0.48
CD44-222ENST00000526025 PIK3IP1Q96FE7 263 aa18.06■□□□□ 0.48
CD44-222ENST00000526025 PITX2Q99697 317 aa18.06■□□□□ 0.48
CD44-222ENST00000526025 TOR3AQ9H497 397 aa18.06■□□□□ 0.48
CD44-222ENST00000526025 NOX3Q9HBY0 568 aa18.06■□□□□ 0.48
CD44-222ENST00000526025 CCNB1IP1Q9NPC3 277 aa18.06■□□□□ 0.48
CD44-222ENST00000526025 HINT3Q9NQE9 182 aaKnown RBP18.06■□□□□ 0.48
CD44-222ENST00000526025 SMPD3Q9NY59 655 aaPredicted RBP18.06■□□□□ 0.48
CD44-222ENST00000526025 ROS1P08922 2347 aa18.06■□□□□ 0.48
CD44-222ENST00000526025 RAI1Q7Z5J4 1906 aaPredicted RBP18.06■□□□□ 0.48
CD44-222ENST00000526025 M0R1B8 84 aa18.05■□□□□ 0.48
CD44-222ENST00000526025 PTHP01270 115 aa18.05■□□□□ 0.48
CD44-222ENST00000526025 SERPINA5P05154 406 aa18.05■□□□□ 0.48
CD44-222ENST00000526025 CDC42P60953 191 aa18.05■□□□□ 0.48
CD44-222ENST00000526025 TEKQ02763 1124 aa18.05■□□□□ 0.48
CD44-222ENST00000526025 SCRN3Q0VDG4 424 aa18.05■□□□□ 0.48
CD44-222ENST00000526025 SLC35D3Q5M8T2 416 aa18.05■□□□□ 0.48
CD44-222ENST00000526025 LINC01590Q5TEZ4 76 aa18.05■□□□□ 0.48
CD44-222ENST00000526025 LPCAT4Q643R3 524 aa18.05■□□□□ 0.48
CD44-222ENST00000526025 ALKBH2Q6NS38 261 aa18.05■□□□□ 0.48
CD44-222ENST00000526025 PLBD1Q6P4A8 553 aa18.05■□□□□ 0.48
CD44-222ENST00000526025 CPOQ8IVL8 374 aa18.05■□□□□ 0.48
CD44-222ENST00000526025 OR9Q1Q8NGQ5 310 aa18.05■□□□□ 0.48
CD44-222ENST00000526025 FGFBP3Q8TAT2 258 aa18.05■□□□□ 0.48
CD44-222ENST00000526025 TMEM163Q8TC26 289 aa18.05■□□□□ 0.48
CD44-222ENST00000526025 TRUB1Q8WWH5 349 aaKnown RBP18.05■□□□□ 0.48
CD44-222ENST00000526025 HTRA1Q92743 480 aa18.05■□□□□ 0.48
CD44-222ENST00000526025 MBOAT4Q96T53 435 aa18.05■□□□□ 0.48
CD44-222ENST00000526025 HCAR1Q9BXC0 346 aa18.05■□□□□ 0.48
CD44-222ENST00000526025 CLEC4MQ9H2X3 399 aaPredicted RBP18.05■□□□□ 0.48
CD44-222ENST00000526025 NKX1-2Q9UD57 310 aaPredicted RBP18.05■□□□□ 0.48
CD44-222ENST00000526025 NDRG4Q9ULP0 352 aaKnown RBP18.05■□□□□ 0.48
CD44-222ENST00000526025 RNF115Q9Y4L5 304 aa18.05■□□□□ 0.48
CD44-222ENST00000526025 TIMM10BQ9Y5J6 103 aa18.05■□□□□ 0.48
CD44-222ENST00000526025 HRNRQ86YZ3 2850 aaPredicted RBP18.05■□□□□ 0.48
CD44-222ENST00000526025 ABCA12Q86UK0 2595 aa18.05■□□□□ 0.48
CD44-222ENST00000526025 CACNA1DQ01668 2161 aa18.04■□□□□ 0.48
CD44-222ENST00000526025 FAM183AA6NL82 134 aa18.04■□□□□ 0.48
CD44-222ENST00000526025 SLC16A6O15403 523 aa18.04■□□□□ 0.48
CD44-222ENST00000526025 PRKYO43930 277 aa18.04■□□□□ 0.48
CD44-222ENST00000526025 GLCEO94923 617 aa18.04■□□□□ 0.48
CD44-222ENST00000526025 SNAP29O95721 258 aa18.04■□□□□ 0.48
CD44-222ENST00000526025 TFP02787 698 aa18.04■□□□□ 0.48
CD44-222ENST00000526025 CECR9P0C854 216 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms