RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 GP1BAP07359 652 aa11.89□□□□□ -0.51
CAPN1-202ENST00000524773 MGMTP16455 207 aa11.89□□□□□ -0.51
CAPN1-202ENST00000524773 AKR1C4P17516 323 aa11.89□□□□□ -0.51
CAPN1-202ENST00000524773 CSF2RBP32927 897 aa11.89□□□□□ -0.51
CAPN1-202ENST00000524773 RAB11BQ15907 218 aa11.89□□□□□ -0.51
CAPN1-202ENST00000524773 CSNK1A1LQ8N752 337 aa11.89□□□□□ -0.51
CAPN1-202ENST00000524773 ZC3H10Q96K80 434 aaKnown RBP11.89□□□□□ -0.51
CAPN1-202ENST00000524773 PLA2G2FQ9BZM2 168 aa11.89□□□□□ -0.51
CAPN1-202ENST00000524773 COMMD4Q9H0A8 199 aa11.89□□□□□ -0.51
CAPN1-202ENST00000524773 TLNRD1Q9H1K6 362 aa11.89□□□□□ -0.51
CAPN1-202ENST00000524773 MTIF3Q9H2K0 278 aaKnown RBP11.89□□□□□ -0.51
CAPN1-202ENST00000524773 SFXN1Q9H9B4 322 aa11.89□□□□□ -0.51
CAPN1-202ENST00000524773 PURGQ9UJV8 347 aaKnown RBP11.89□□□□□ -0.51
CAPN1-202ENST00000524773 A0A0B4J2A0 478 aa11.89□□□□□ -0.51
CAPN1-202ENST00000524773 SPARCP09486 303 aa11.89□□□□□ -0.51
CAPN1-202ENST00000524773 NPBWR1P48145 328 aa11.89□□□□□ -0.51
CAPN1-202ENST00000524773 MRPS10P82664 201 aaKnown RBP11.89□□□□□ -0.51
CAPN1-202ENST00000524773 EGR4Q05215 589 aa11.89□□□□□ -0.51
CAPN1-202ENST00000524773 EIF2B5Q13144 721 aaKnown RBP11.89□□□□□ -0.51
CAPN1-202ENST00000524773 PPP1R1AQ13522 171 aa11.89□□□□□ -0.51
CAPN1-202ENST00000524773 EXOSC6Q5RKV6 272 aaKnown RBP11.89□□□□□ -0.51
CAPN1-202ENST00000524773 PRAMEF17Q5VTA0 474 aa11.89□□□□□ -0.51
CAPN1-202ENST00000524773 ZCCHC12Q6PEW1 402 aa11.89□□□□□ -0.51
CAPN1-202ENST00000524773 ETV3LQ6ZN32 361 aa11.89□□□□□ -0.51
CAPN1-202ENST00000524773 MOB3CQ70IA8 216 aa11.89□□□□□ -0.51
CAPN1-202ENST00000524773 FAM122BQ7Z309 247 aa11.89□□□□□ -0.51
CAPN1-202ENST00000524773 ADAD2Q8NCV1 583 aaKnown RBP11.89□□□□□ -0.51
CAPN1-202ENST00000524773 RBM18Q96H35 190 aaKnown RBP11.89□□□□□ -0.51
CAPN1-202ENST00000524773 RTN4RQ9BZR6 473 aa11.89□□□□□ -0.51
CAPN1-202ENST00000524773 SELENOIQ9C0D9 397 aa11.89□□□□□ -0.51
CAPN1-202ENST00000524773 SLC25A32Q9H2D1 315 aa11.89□□□□□ -0.51
CAPN1-202ENST00000524773 TCEAL2Q9H3H9 227 aaPredicted RBP11.89□□□□□ -0.51
CAPN1-202ENST00000524773 MBD2Q9UBB5 411 aa11.89□□□□□ -0.51
CAPN1-202ENST00000524773 SHPKQ9UHJ6 478 aa11.89□□□□□ -0.51
CAPN1-202ENST00000524773 KLK13Q9UKR3 277 aa11.89□□□□□ -0.51
CAPN1-202ENST00000524773 ETV7Q9Y603 341 aa11.89□□□□□ -0.51
CAPN1-202ENST00000524773 TDRD6O60522 2096 aaKnown RBP11.88□□□□□ -0.51
CAPN1-202ENST00000524773 OR2AT4A6NND4 320 aa11.88□□□□□ -0.51
CAPN1-202ENST00000524773 K7EQS6 105 aa11.88□□□□□ -0.51
CAPN1-202ENST00000524773 AGPAT2O15120 278 aa11.88□□□□□ -0.51
CAPN1-202ENST00000524773 ITGB2P05107 769 aa11.88□□□□□ -0.51
CAPN1-202ENST00000524773 RBM34P42696 430 aaKnown RBP11.88□□□□□ -0.51
CAPN1-202ENST00000524773 CAPZA2P47755 286 aa11.88□□□□□ -0.51
CAPN1-202ENST00000524773 CTAG1AP78358 180 aa11.88□□□□□ -0.51
CAPN1-202ENST00000524773 FGL1Q08830 312 aa11.88□□□□□ -0.51
CAPN1-202ENST00000524773 CDNFQ49AH0 187 aa11.88□□□□□ -0.51
CAPN1-202ENST00000524773 GLT8D1Q68CQ7 371 aa11.88□□□□□ -0.51
CAPN1-202ENST00000524773 CDC20BQ86Y33 519 aa11.88□□□□□ -0.51
CAPN1-202ENST00000524773 SAMD14Q8IZD0 417 aaPredicted RBP11.88□□□□□ -0.51
CAPN1-202ENST00000524773 SDR16C5Q8N3Y7 309 aa11.88□□□□□ -0.51
CAPN1-202ENST00000524773 CAMKVQ8NCB2 501 aa11.88□□□□□ -0.51
CAPN1-202ENST00000524773 OR13C8Q8NGS7 320 aa11.88□□□□□ -0.51
CAPN1-202ENST00000524773 RPS4Y2Q8TD47 263 aa11.88□□□□□ -0.51
CAPN1-202ENST00000524773 CTHRC1Q96CG8 243 aa11.88□□□□□ -0.51
CAPN1-202ENST00000524773 CCDC3Q9BQI4 270 aa11.88□□□□□ -0.51
CAPN1-202ENST00000524773 RPP25Q9BUL9 199 aaKnown RBP11.88□□□□□ -0.51
CAPN1-202ENST00000524773 CST11Q9H112 138 aa11.88□□□□□ -0.51
CAPN1-202ENST00000524773 DNTTIP1Q9H147 329 aa11.88□□□□□ -0.51
CAPN1-202ENST00000524773 SLC22A11Q9NSA0 550 aa11.88□□□□□ -0.51
CAPN1-202ENST00000524773 CELSR3Q9NYQ7 3312 aa11.88□□□□□ -0.51
CAPN1-202ENST00000524773 A0A087WV62 115 aa11.88□□□□□ -0.51
CAPN1-202ENST00000524773 FARS2O95363 451 aaKnown RBP11.88□□□□□ -0.51
CAPN1-202ENST00000524773 CT45A8P0DMV1 189 aa11.88□□□□□ -0.51
CAPN1-202ENST00000524773 CT45A9P0DMV2 189 aa11.88□□□□□ -0.51
CAPN1-202ENST00000524773 PI3P19957 117 aa11.88□□□□□ -0.51
CAPN1-202ENST00000524773 ALOX5APP20292 161 aa11.88□□□□□ -0.51
CAPN1-202ENST00000524773 SNTB1Q13884 538 aaKnown RBP11.88□□□□□ -0.51
CAPN1-202ENST00000524773 ZNHIT3Q15649 155 aaPredicted RBP11.88□□□□□ -0.51
CAPN1-202ENST00000524773 TOMM34Q15785 309 aaPredicted RBP11.88□□□□□ -0.51
CAPN1-202ENST00000524773 CT45A2Q5DJT8 189 aa11.88□□□□□ -0.51
CAPN1-202ENST00000524773 BCORP1Q8N888 145 aa11.88□□□□□ -0.51
CAPN1-202ENST00000524773 C16orf52Q8NHV5 167 aa11.88□□□□□ -0.51
CAPN1-202ENST00000524773 NUDCD2Q8WVJ2 157 aa11.88□□□□□ -0.51
CAPN1-202ENST00000524773 TMED6Q8WW62 240 aa11.88□□□□□ -0.51
CAPN1-202ENST00000524773 ASB16Q96NS5 453 aa11.88□□□□□ -0.51
CAPN1-202ENST00000524773 NRSN2Q9GZP1 204 aa11.88□□□□□ -0.51
CAPN1-202ENST00000524773 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.88□□□□□ -0.51
CAPN1-202ENST00000524773 HRASLS2Q9NWW9 162 aa11.88□□□□□ -0.51
CAPN1-202ENST00000524773 ATXN7L1Q9ULK2 861 aaPredicted RBP11.88□□□□□ -0.51
CAPN1-202ENST00000524773 SERINC4A6NH21 518 aa11.88□□□□□ -0.51
CAPN1-202ENST00000524773 PRR19A6NJB7 356 aa11.88□□□□□ -0.51
CAPN1-202ENST00000524773 ZNF705EA8MWA4 302 aaPredicted RBP11.88□□□□□ -0.51
CAPN1-202ENST00000524773 F8W036 122 aa11.88□□□□□ -0.51
CAPN1-202ENST00000524773 CD14P08571 375 aa11.88□□□□□ -0.51
CAPN1-202ENST00000524773 UBBP0CG47 229 aa11.88□□□□□ -0.51
CAPN1-202ENST00000524773 UBCP0CG48 685 aaKnown RBP11.88□□□□□ -0.51
CAPN1-202ENST00000524773 PGAM2P15259 253 aa11.88□□□□□ -0.51
CAPN1-202ENST00000524773 PPM1FP49593 454 aaPredicted RBP11.88□□□□□ -0.51
CAPN1-202ENST00000524773 GPR143P51810 404 aa11.88□□□□□ -0.51
CAPN1-202ENST00000524773 RPS27AP62979 156 aaKnown RBP11.88□□□□□ -0.51
CAPN1-202ENST00000524773 UBA52P62987 128 aaKnown RBP11.88□□□□□ -0.51
CAPN1-202ENST00000524773 RPS21P63220 83 aaKnown RBP11.88□□□□□ -0.51
CAPN1-202ENST00000524773 CXADRP78310 365 aa11.88□□□□□ -0.51
CAPN1-202ENST00000524773 BLOC1S1P78537 153 aa11.88□□□□□ -0.51
CAPN1-202ENST00000524773 ZNF74Q16587 644 aa11.88□□□□□ -0.51
CAPN1-202ENST00000524773 C11orf87Q6NUJ2 197 aa11.88□□□□□ -0.51
CAPN1-202ENST00000524773 CHRDL2Q6WN34 429 aa11.88□□□□□ -0.51
CAPN1-202ENST00000524773 ZBTB8AQ96BR9 441 aa11.88□□□□□ -0.51
CAPN1-202ENST00000524773 C4orf45Q96LM5 186 aa11.88□□□□□ -0.51
CAPN1-202ENST00000524773 KXD1Q9BQD3 176 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms