RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 MYL12AP19105 171 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 F2RP25116 425 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 S100GP29377 79 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 CHI3L1P36222 383 aaPredicted RBP6.82□□□□□ -1.32
HDAC3-216ENST00000523088 CPOXP36551 454 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 MMP12P39900 470 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 RBM34P42696 430 aaKnown RBP6.82□□□□□ -1.32
HDAC3-216ENST00000523088 CTSKP43235 329 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 ART1P52961 327 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 MVDP53602 400 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 UCNP55089 124 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 ERVFRD-1P60508 538 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 RAB1AP62820 205 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 HBA1P69905 142 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 CXADRP78310 365 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 DEFA5Q01523 94 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 MC2RQ01718 297 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 MVKQ03426 396 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 ABHD18Q0P651 414 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 SURF2Q15527 256 aaPredicted RBP6.82□□□□□ -1.32
HDAC3-216ENST00000523088 PLEKHN1Q494U1 663 aaPredicted RBP6.82□□□□□ -1.32
HDAC3-216ENST00000523088 ZNF404Q494X3 552 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 MESTQ5EB52 335 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 PHF19Q5T6S3 580 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 OTUD1Q5VV17 481 aaPredicted RBP6.82□□□□□ -1.32
HDAC3-216ENST00000523088 EIF5AL1Q6IS14 154 aaKnown RBP6.82□□□□□ -1.32
HDAC3-216ENST00000523088 ADAM5Q6NVV9 412 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 STEAP1BQ6NZ63 245 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 SMARCD3Q6STE5 483 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 TMEM205Q6UW68 189 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 FAM131AQ6UXB0 335 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 FBXW12Q6X9E4 464 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 ZNF620Q6ZNG0 422 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 SLC16A9Q7RTY1 509 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 SLC22A15Q8IZD6 547 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 HORMAD2Q8N7B1 307 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 TMEM185AQ8NFB2 350 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 OR10X1Q8NGY0 326 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 MCFD2Q8NI22 146 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 MARCH1Q8TCQ1 289 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 C2CD4CQ8TF44 421 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 HPSE2Q8WWQ2 592 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 RORBQ92753 470 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 GTPBP3Q969Y2 492 aaKnown RBP6.82□□□□□ -1.32
HDAC3-216ENST00000523088 MIB2Q96AX9 1013 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 ROPN1LQ96C74 230 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 NTNG2Q96CW9 530 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 RCN3Q96D15 328 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 PERPQ96FX8 193 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 MARK4Q96L34 752 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 ERMAPQ96PL5 475 aaPredicted RBP6.82□□□□□ -1.32
HDAC3-216ENST00000523088 OR52E6Q96RD3 313 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 INSM2Q96T92 566 aaPredicted RBP6.82□□□□□ -1.32
HDAC3-216ENST00000523088 SDHCQ99643 169 aaPredicted RBP6.82□□□□□ -1.32
HDAC3-216ENST00000523088 NPAS2Q99743 824 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 TRIM51Q9BSJ1 452 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 ASPNQ9BXN1 380 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 ACTR3CQ9C0K3 210 aaPredicted RBP6.82□□□□□ -1.32
HDAC3-216ENST00000523088 NAA50Q9GZZ1 169 aaKnown RBP6.82□□□□□ -1.32
HDAC3-216ENST00000523088 ISYNA1Q9NPH2 558 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 SMCO4Q9NRQ5 59 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 CYSLTR2Q9NS75 346 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 RAD18Q9NS91 495 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 CRIM1Q9NZV1 1036 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 FTSJ1Q9UET6 329 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 STEAP1Q9UHE8 339 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 KCNK6Q9Y257 313 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 FNDC3AQ9Y2H6 1198 aaKnown RBP6.82□□□□□ -1.32
HDAC3-216ENST00000523088 AMDHD2Q9Y303 409 aa6.82□□□□□ -1.32
HDAC3-216ENST00000523088 TSSC4Q9Y5U2 329 aaPredicted RBP6.82□□□□□ -1.32
HDAC3-216ENST00000523088 TBC1D3DA0A087WVF3 549 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 TBC1D3IA0A087WXS9 549 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 TBC1D3EA0A087X179 549 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 A0A1W2PR48 441 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 TRAPPC13A5PLN9 417 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 COLCA2A8K830 154 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 C10orf142B7Z368 130 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 TBC1D3LB9A6J9 549 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 E7ENX8 843 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 SIVA1O15304 175 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 HYAL3O43820 417 aaPredicted RBP6.81□□□□□ -1.32
HDAC3-216ENST00000523088 ITGB2P05107 769 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 NMBP08949 121 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 CSF3P09919 207 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 TBC1D3HP0C7X1 549 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 ADRA2CP18825 462 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 AGXTP21549 392 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 CRHBPP24387 322 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 CXCR1P25024 350 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 HTR2AP28223 471 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 AKT2P31751 481 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 DRD3P35462 400 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 ACVR1BP36896 505 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 CTSOP43234 321 aaPredicted RBP6.81□□□□□ -1.32
HDAC3-216ENST00000523088 SNRPD2P62316 118 aaKnown RBP6.81□□□□□ -1.32
HDAC3-216ENST00000523088 BTG1P62324 171 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 PITX1P78337 314 aaPredicted RBP6.81□□□□□ -1.32
HDAC3-216ENST00000523088 FMO1Q01740 532 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 NAAAQ02083 359 aa6.81□□□□□ -1.32
HDAC3-216ENST00000523088 PAX5Q02548 391 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms