RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 FBXO32Q969P5 355 aa1.3□□□□□ -2.2
PCM1-217ENST00000522998 FAM3DQ96BQ1 224 aa1.3□□□□□ -2.2
PCM1-217ENST00000522998 ZNF681Q96N22 645 aa1.3□□□□□ -2.2
PCM1-217ENST00000522998 RSPO3Q9BXY4 272 aaPredicted RBP1.3□□□□□ -2.2
PCM1-217ENST00000522998 PKIBQ9C010 78 aa1.3□□□□□ -2.2
PCM1-217ENST00000522998 SAV1Q9H4B6 383 aaPredicted RBP1.3□□□□□ -2.2
PCM1-217ENST00000522998 ZNRD1Q9P1U0 126 aa1.3□□□□□ -2.2
PCM1-217ENST00000522998 PSMC3IPQ9P2W1 217 aaPredicted RBP1.3□□□□□ -2.2
PCM1-217ENST00000522998 ZNF222Q9UK12 451 aa1.3□□□□□ -2.2
PCM1-217ENST00000522998 LSM7Q9UK45 103 aaKnown RBP1.3□□□□□ -2.2
PCM1-217ENST00000522998 NUP50Q9UKX7 468 aa1.3□□□□□ -2.2
PCM1-217ENST00000522998 ING4Q9UNL4 249 aa1.3□□□□□ -2.2
PCM1-217ENST00000522998 MRPS18BQ9Y676 258 aaKnown RBP1.3□□□□□ -2.2
PCM1-217ENST00000522998 MAPK8IP3Q9UPT6 1336 aa1.3□□□□□ -2.2
PCM1-217ENST00000522998 COL27A1Q8IZC6 1860 aaPredicted RBP1.3□□□□□ -2.2
PCM1-217ENST00000522998 CNTNAP1P78357 1384 aa1.3□□□□□ -2.2
PCM1-217ENST00000522998 AKNAQ7Z591 1439 aa1.3□□□□□ -2.2
PCM1-217ENST00000522998 SVILO95425 2214 aa1.3□□□□□ -2.2
PCM1-217ENST00000522998 CIB4A0PJX0 185 aa1.29□□□□□ -2.2
PCM1-217ENST00000522998 XKRY2A2RUG3 117 aa1.29□□□□□ -2.2
PCM1-217ENST00000522998 F6UB75 175 aa1.29□□□□□ -2.2
PCM1-217ENST00000522998 ZNF207O43670 478 aaKnown RBP1.29□□□□□ -2.2
PCM1-217ENST00000522998 SRP72O76094 671 aaKnown RBP1.29□□□□□ -2.2
PCM1-217ENST00000522998 TSPAN13O95857 204 aa1.29□□□□□ -2.2
PCM1-217ENST00000522998 HLA-DPB1P04440 258 aa1.29□□□□□ -2.2
PCM1-217ENST00000522998 FABP3P05413 133 aa1.29□□□□□ -2.2
PCM1-217ENST00000522998 BCHEP06276 602 aa1.29□□□□□ -2.2
PCM1-217ENST00000522998 RHOXF2BP0C7M4 288 aa1.29□□□□□ -2.2
PCM1-217ENST00000522998 CALM1P0DP23 149 aa1.29□□□□□ -2.2
PCM1-217ENST00000522998 CALM2P0DP24 149 aa1.29□□□□□ -2.2
PCM1-217ENST00000522998 CALM3P0DP25 149 aa1.29□□□□□ -2.2
PCM1-217ENST00000522998 CCNB1P14635 433 aa1.29□□□□□ -2.2
PCM1-217ENST00000522998 HNRNPH3P31942 346 aaKnown RBP1.29□□□□□ -2.2
PCM1-217ENST00000522998 FOXN2P32314 431 aa1.29□□□□□ -2.2
PCM1-217ENST00000522998 TNNT2P45379 298 aaPredicted RBP1.29□□□□□ -2.2
PCM1-217ENST00000522998 KRTAP12-3P60328 96 aa1.29□□□□□ -2.2
PCM1-217ENST00000522998 SLC25A11Q02978 314 aaKnown RBP1.29□□□□□ -2.2
PCM1-217ENST00000522998 MXD1Q05195 221 aa1.29□□□□□ -2.2
PCM1-217ENST00000522998 LOXL1Q08397 574 aaPredicted RBP1.29□□□□□ -2.2
PCM1-217ENST00000522998 SYCNQ0VAF6 134 aa1.29□□□□□ -2.2
PCM1-217ENST00000522998 TCP10Q12799 353 aa1.29□□□□□ -2.2
PCM1-217ENST00000522998 GINS1Q14691 196 aa1.29□□□□□ -2.2
PCM1-217ENST00000522998 PON2Q15165 354 aa1.29□□□□□ -2.2
PCM1-217ENST00000522998 STK11Q15831 433 aa1.29□□□□□ -2.2
PCM1-217ENST00000522998 THEM4Q5T1C6 240 aa1.29□□□□□ -2.2
PCM1-217ENST00000522998 ANKRD26P1Q6NSI1 321 aa1.29□□□□□ -2.2
PCM1-217ENST00000522998 CEMP1Q6PRD7 247 aaPredicted RBP1.29□□□□□ -2.2
PCM1-217ENST00000522998 SASS6Q6UVJ0 657 aa1.29□□□□□ -2.2
PCM1-217ENST00000522998 ZNF836Q6ZNA1 936 aa1.29□□□□□ -2.2
PCM1-217ENST00000522998 WDR86Q86TI4 376 aa1.29□□□□□ -2.2
PCM1-217ENST00000522998 OAFQ86UD1 273 aa1.29□□□□□ -2.2
PCM1-217ENST00000522998 FAM228AQ86W67 206 aa1.29□□□□□ -2.2
PCM1-217ENST00000522998 MMAAQ8IVH4 418 aaKnown RBP1.29□□□□□ -2.2
PCM1-217ENST00000522998 LIX1Q8N485 282 aa1.29□□□□□ -2.2
PCM1-217ENST00000522998 EID2Q8N6I1 236 aa1.29□□□□□ -2.2
PCM1-217ENST00000522998 CXorf40AQ8TE69 158 aa1.29□□□□□ -2.2
PCM1-217ENST00000522998 ABHD3Q8WU67 409 aa1.29□□□□□ -2.2
PCM1-217ENST00000522998 GALNT14Q96FL9 552 aa1.29□□□□□ -2.2
PCM1-217ENST00000522998 DUS3LQ96G46 650 aaKnown RBP1.29□□□□□ -2.2
PCM1-217ENST00000522998 PDXPQ96GD0 296 aa1.29□□□□□ -2.2
PCM1-217ENST00000522998 TPD52L3Q96J77 140 aa1.29□□□□□ -2.2
PCM1-217ENST00000522998 PKNOX2Q96KN3 472 aa1.29□□□□□ -2.2
PCM1-217ENST00000522998 ZNF578Q96N58 590 aaPredicted RBP1.29□□□□□ -2.2
PCM1-217ENST00000522998 SERPINB12Q96P63 405 aa1.29□□□□□ -2.2
PCM1-217ENST00000522998 SLC25A2Q9BXI2 301 aa1.29□□□□□ -2.2
PCM1-217ENST00000522998 NEUROG2Q9H2A3 272 aa1.29□□□□□ -2.2
PCM1-217ENST00000522998 SYNDIG1Q9H7V2 258 aa1.29□□□□□ -2.2
PCM1-217ENST00000522998 HMG20AQ9NP66 347 aa1.29□□□□□ -2.2
PCM1-217ENST00000522998 FGF20Q9NP95 211 aaPredicted RBP1.29□□□□□ -2.2
PCM1-217ENST00000522998 ZNF355PQ9NSJ1 428 aa1.29□□□□□ -2.2
PCM1-217ENST00000522998 CTNNA3Q9UI47 895 aa1.29□□□□□ -2.2
PCM1-217ENST00000522998 RFNGQ9Y644 331 aa1.29□□□□□ -2.2
PCM1-217ENST00000522998 TMEM14AQ9Y6G1 99 aa1.29□□□□□ -2.2
PCM1-217ENST00000522998 KCNE3Q9Y6H6 103 aa1.29□□□□□ -2.2
PCM1-217ENST00000522998 COL1A2P08123 1366 aa1.29□□□□□ -2.2
PCM1-217ENST00000522998 PTPRTO14522 1441 aa1.29□□□□□ -2.2
PCM1-217ENST00000522998 ADAMTS13Q76LX8 1427 aa1.29□□□□□ -2.2
PCM1-217ENST00000522998 BRWD3Q6RI45 1802 aa1.29□□□□□ -2.2
PCM1-217ENST00000522998 GLYATL1P3A0A0U1RQE8 302 aa1.28□□□□□ -2.2
PCM1-217ENST00000522998 A0A0U1RQV1 116 aa1.28□□□□□ -2.2
PCM1-217ENST00000522998 ZNF816-ZNF321PA0A0X1KG74 233 aa1.28□□□□□ -2.2
PCM1-217ENST00000522998 A0A1W2PP18 115 aa1.28□□□□□ -2.2
PCM1-217ENST00000522998 TMEM223A0PJW6 202 aa1.28□□□□□ -2.2
PCM1-217ENST00000522998 ZNF716A6NP11 495 aa1.28□□□□□ -2.2
PCM1-217ENST00000522998 C17orf51A8MQB3 221 aa1.28□□□□□ -2.2
PCM1-217ENST00000522998 DPM1O60762 260 aa1.28□□□□□ -2.2
PCM1-217ENST00000522998 GABARAPO95166 117 aa1.28□□□□□ -2.2
PCM1-217ENST00000522998 SLC25A14O95258 325 aaPredicted RBP1.28□□□□□ -2.2
PCM1-217ENST00000522998 IGKV1-17P01599 117 aa1.28□□□□□ -2.2
PCM1-217ENST00000522998 UQCRFS1P1P0C7P4 283 aa1.28□□□□□ -2.2
PCM1-217ENST00000522998 ZNF735P0CB33 412 aa1.28□□□□□ -2.2
PCM1-217ENST00000522998 RAB3BP20337 219 aa1.28□□□□□ -2.2
PCM1-217ENST00000522998 MAS1LP35410 378 aa1.28□□□□□ -2.2
PCM1-217ENST00000522998 GPX4P36969 197 aaPredicted RBP1.28□□□□□ -2.2
PCM1-217ENST00000522998 NAA10P41227 235 aaPredicted RBP1.28□□□□□ -2.2
PCM1-217ENST00000522998 CSNK1A1P48729 337 aa1.28□□□□□ -2.2
PCM1-217ENST00000522998 ACLYP53396 1101 aa1.28□□□□□ -2.2
PCM1-217ENST00000522998 RAP1AP62834 184 aa1.28□□□□□ -2.2
PCM1-217ENST00000522998 ACTG2P63267 376 aa1.28□□□□□ -2.2
PCM1-217ENST00000522998 ADARB1P78563 741 aaKnown RBP1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms