RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 RAP2AP10114 183 aa15.4■□□□□ 0.06
CLK4-211ENST00000522556 NR4A1P22736 598 aa15.4■□□□□ 0.06
CLK4-211ENST00000522556 TSPAN31Q12999 210 aa15.4■□□□□ 0.06
CLK4-211ENST00000522556 TNK1Q13470 666 aa15.4■□□□□ 0.06
CLK4-211ENST00000522556 CLEC12BQ2HXU8 276 aa15.4■□□□□ 0.06
CLK4-211ENST00000522556 NRN1LQ496H8 165 aa15.4■□□□□ 0.06
CLK4-211ENST00000522556 CLEC12AQ5QGZ9 265 aa15.4■□□□□ 0.06
CLK4-211ENST00000522556 FAM27BQ5VT28 67 aa15.4■□□□□ 0.06
CLK4-211ENST00000522556 LRP11Q86VZ4 500 aa15.4■□□□□ 0.06
CLK4-211ENST00000522556 SPATA24Q86W54 205 aa15.4■□□□□ 0.06
CLK4-211ENST00000522556 HS3ST5Q8IZT8 346 aa15.4■□□□□ 0.06
CLK4-211ENST00000522556 ZCCHC24Q8N2G6 241 aaKnown RBP15.4■□□□□ 0.06
CLK4-211ENST00000522556 MAPK1IP1LQ8NDC0 245 aa15.4■□□□□ 0.06
CLK4-211ENST00000522556 SLC30A7Q8NEW0 376 aa15.4■□□□□ 0.06
CLK4-211ENST00000522556 SLCO4A1Q96BD0 722 aa15.4■□□□□ 0.06
CLK4-211ENST00000522556 TRMT61AQ96FX7 289 aaKnown RBP15.4■□□□□ 0.06
CLK4-211ENST00000522556 SORCS2Q96PQ0 1159 aa15.4■□□□□ 0.06
CLK4-211ENST00000522556 ZNF416Q9BWM5 594 aa15.4■□□□□ 0.06
CLK4-211ENST00000522556 ZNF442Q9H7R0 627 aa15.4■□□□□ 0.06
CLK4-211ENST00000522556 POLE4Q9NR33 117 aa15.4■□□□□ 0.06
CLK4-211ENST00000522556 VSX1Q9NZR4 365 aaPredicted RBP15.4■□□□□ 0.06
CLK4-211ENST00000522556 MYEF2Q9P2K5 600 aaKnown RBP15.4■□□□□ 0.06
CLK4-211ENST00000522556 CHD3Q12873 2000 aaKnown RBP15.39■□□□□ 0.05
CLK4-211ENST00000522556 AQP12BA6NM10 295 aa15.39■□□□□ 0.05
CLK4-211ENST00000522556 H7C417 338 aa15.39■□□□□ 0.05
CLK4-211ENST00000522556 SSX4O60224 188 aa15.39■□□□□ 0.05
CLK4-211ENST00000522556 SLC16A7O60669 478 aa15.39■□□□□ 0.05
CLK4-211ENST00000522556 CCNB2O95067 398 aa15.39■□□□□ 0.05
CLK4-211ENST00000522556 SOX14O95416 240 aa15.39■□□□□ 0.05
CLK4-211ENST00000522556 TP53P04637 393 aaPredicted RBP15.39■□□□□ 0.05
CLK4-211ENST00000522556 HIST1H1CP16403 213 aaKnown RBP15.39■□□□□ 0.05
CLK4-211ENST00000522556 SLC6A6P31641 620 aa15.39■□□□□ 0.05
CLK4-211ENST00000522556 PSG4Q00888 419 aa15.39■□□□□ 0.05
CLK4-211ENST00000522556 GPR139Q6DWJ6 353 aa15.39■□□□□ 0.05
CLK4-211ENST00000522556 TMEM53Q6P2H8 277 aa15.39■□□□□ 0.05
CLK4-211ENST00000522556 DNM1P46Q6ZS02 220 aa15.39■□□□□ 0.05
CLK4-211ENST00000522556 AQP12AQ8IXF9 295 aa15.39■□□□□ 0.05
CLK4-211ENST00000522556 OR4K13Q8NH42 304 aa15.39■□□□□ 0.05
CLK4-211ENST00000522556 COX4I2Q96KJ9 171 aa15.39■□□□□ 0.05
CLK4-211ENST00000522556 NMNAT3Q96T66 252 aa15.39■□□□□ 0.05
CLK4-211ENST00000522556 IFT27Q9BW83 186 aa15.39■□□□□ 0.05
CLK4-211ENST00000522556 MRPL37Q9BZE1 423 aaKnown RBP15.39■□□□□ 0.05
CLK4-211ENST00000522556 TRIM15Q9C019 465 aa15.39■□□□□ 0.05
CLK4-211ENST00000522556 NUAK2Q9H093 628 aa15.39■□□□□ 0.05
CLK4-211ENST00000522556 WNT5BQ9H1J7 359 aa15.39■□□□□ 0.05
CLK4-211ENST00000522556 REEP1Q9H902 201 aa15.39■□□□□ 0.05
CLK4-211ENST00000522556 COA3Q9Y2R0 106 aaPredicted RBP15.39■□□□□ 0.05
CLK4-211ENST00000522556 CDH10Q9Y6N8 788 aa15.39■□□□□ 0.05
CLK4-211ENST00000522556 LOC100509620A0A075B734 347 aa15.38■□□□□ 0.05
CLK4-211ENST00000522556 TCRBV3S1A0A5B6 114 aa15.38■□□□□ 0.05
CLK4-211ENST00000522556 NR2C1P13056 603 aa15.38■□□□□ 0.05
CLK4-211ENST00000522556 NPR2P20594 1047 aa15.38■□□□□ 0.05
CLK4-211ENST00000522556 MSR1P21757 451 aa15.38■□□□□ 0.05
CLK4-211ENST00000522556 RPS6KA3P51812 740 aa15.38■□□□□ 0.05
CLK4-211ENST00000522556 EFNB3Q15768 340 aa15.38■□□□□ 0.05
CLK4-211ENST00000522556 MEP1BQ16820 701 aa15.38■□□□□ 0.05
CLK4-211ENST00000522556 SLC35F1Q5T1Q4 408 aa15.38■□□□□ 0.05
CLK4-211ENST00000522556 LEG1Q6P5S2 330 aa15.38■□□□□ 0.05
CLK4-211ENST00000522556 Q71RC1 249 aaPredicted RBP15.38■□□□□ 0.05
CLK4-211ENST00000522556 ZNF525Q8N782 197 aa15.38■□□□□ 0.05
CLK4-211ENST00000522556 SDR9C7Q8NEX9 313 aa15.38■□□□□ 0.05
CLK4-211ENST00000522556 IL17RDQ8NFM7 739 aa15.38■□□□□ 0.05
CLK4-211ENST00000522556 C18orf12Q96KH6 178 aa15.38■□□□□ 0.05
CLK4-211ENST00000522556 NIPSNAP1Q9BPW8 284 aa15.38■□□□□ 0.05
CLK4-211ENST00000522556 SYT3Q9BQG1 590 aa15.38■□□□□ 0.05
CLK4-211ENST00000522556 OR2H1Q9GZK4 316 aa15.38■□□□□ 0.05
CLK4-211ENST00000522556 NDEL1Q9GZM8 345 aa15.38■□□□□ 0.05
CLK4-211ENST00000522556 PLK3Q9H4B4 646 aa15.38■□□□□ 0.05
CLK4-211ENST00000522556 CCNB1IP1Q9NPC3 277 aa15.38■□□□□ 0.05
CLK4-211ENST00000522556 CST1P01037 141 aa15.37■□□□□ 0.05
CLK4-211ENST00000522556 CST2P09228 141 aa15.37■□□□□ 0.05
CLK4-211ENST00000522556 APEHP13798 732 aaKnown RBP15.37■□□□□ 0.05
CLK4-211ENST00000522556 IFNGR2P38484 337 aa15.37■□□□□ 0.05
CLK4-211ENST00000522556 WNT5AP41221 380 aa15.37■□□□□ 0.05
CLK4-211ENST00000522556 NUDT6P53370 316 aa15.37■□□□□ 0.05
CLK4-211ENST00000522556 HSF2Q03933 536 aa15.37■□□□□ 0.05
CLK4-211ENST00000522556 MAD2L1BPQ15013 274 aaPredicted RBP15.37■□□□□ 0.05
CLK4-211ENST00000522556 MICAQ29983 383 aa15.37■□□□□ 0.05
CLK4-211ENST00000522556 TMEM255AQ5JRV8 349 aa15.37■□□□□ 0.05
CLK4-211ENST00000522556 ZNF774Q6NX45 483 aa15.37■□□□□ 0.05
CLK4-211ENST00000522556 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.37■□□□□ 0.05
CLK4-211ENST00000522556 ADCK1Q86TW2 530 aa15.37■□□□□ 0.05
CLK4-211ENST00000522556 OR10G2Q8NGC3 310 aa15.37■□□□□ 0.05
CLK4-211ENST00000522556 OR4Q3Q8NH05 313 aa15.37■□□□□ 0.05
CLK4-211ENST00000522556 FNDC8Q8TC99 324 aa15.37■□□□□ 0.05
CLK4-211ENST00000522556 DOK1Q99704 481 aa15.37■□□□□ 0.05
CLK4-211ENST00000522556 CDH20Q9HBT6 801 aa15.37■□□□□ 0.05
CLK4-211ENST00000522556 ARMC1Q9NVT9 282 aa15.37■□□□□ 0.05
CLK4-211ENST00000522556 IGHV4-30-2A0A087WSY4 118 aa15.36■□□□□ 0.05
CLK4-211ENST00000522556 IGLV1-36A0A0B4J1U3 117 aa15.36■□□□□ 0.05
CLK4-211ENST00000522556 OR6C68A6NDL8 312 aa15.36■□□□□ 0.05
CLK4-211ENST00000522556 FAM171A2A8MVW0 826 aa15.36■□□□□ 0.05
CLK4-211ENST00000522556 B9A039 149 aa15.36■□□□□ 0.05
CLK4-211ENST00000522556 RNF223E7ERA6 249 aa15.36■□□□□ 0.05
CLK4-211ENST00000522556 BHLHE40O14503 412 aa15.36■□□□□ 0.05
CLK4-211ENST00000522556 ARPC3O15145 178 aa15.36■□□□□ 0.05
CLK4-211ENST00000522556 FKBP6O75344 327 aa15.36■□□□□ 0.05
CLK4-211ENST00000522556 ENTPD5O75356 428 aa15.36■□□□□ 0.05
CLK4-211ENST00000522556 KHDRBS3O75525 346 aaKnown RBP15.36■□□□□ 0.05
CLK4-211ENST00000522556 STAMBPO95630 424 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms