RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 HTR6P50406 440 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 SKP1P63208 163 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 CRADDP78560 199 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 POU3F1Q03052 451 aaPredicted RBP3.16□□□□□ -1.9
VPS13B-208ENST00000521037 EGR4Q05215 589 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 EGFEM1PQ0D2K5 195 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 CDH17Q12864 832 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 RIPK1Q13546 671 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 STK11Q15831 433 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 SNCBQ16143 134 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 PARP6Q2NL67 630 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 C18orf21Q32NC0 220 aaPredicted RBP3.16□□□□□ -1.9
VPS13B-208ENST00000521037 ZCCHC12Q6PEW1 402 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 KCTD18Q6PI47 426 aaPredicted RBP3.16□□□□□ -1.9
VPS13B-208ENST00000521037 C6orf89Q6UWU4 347 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 FAM57BQ71RH2 274 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 PIGWQ7Z7B1 504 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 P2RY8Q86VZ1 359 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 SERPINA12Q8IW75 414 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 CDK20Q8IZL9 346 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 BATF2Q8N1L9 274 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 RIBC1Q8N443 379 aaPredicted RBP3.16□□□□□ -1.9
VPS13B-208ENST00000521037 ZSCAN4Q8NAM6 433 aaPredicted RBP3.16□□□□□ -1.9
VPS13B-208ENST00000521037 OR52B6Q8NGF0 335 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 OR4F5Q8NH21 305 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 ACTL9Q8TC94 416 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 RNASE8Q8TDE3 154 aaKnown RBP3.16□□□□□ -1.9
VPS13B-208ENST00000521037 ZNF473Q8WTR7 871 aaKnown RBP3.16□□□□□ -1.9
VPS13B-208ENST00000521037 EEF1AKMT1Q8WVE0 214 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 PEX13Q92968 403 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 GRAMD2BQ96HH9 432 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 SAMD8Q96LT4 415 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 ZIM3Q96PE6 472 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 ZNF300Q96RE9 604 aaPredicted RBP3.16□□□□□ -1.9
VPS13B-208ENST00000521037 TXN2Q99757 166 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 LRRC1Q9BTT6 524 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 TBCDQ9BTW9 1192 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 TSSK1BQ9BXA7 367 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 DPH5Q9H2P9 285 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 DPAGT1Q9H3H5 408 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 C16orf95Q9H693 158 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 ZNF665Q9H7R5 613 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 SEBOXQ9HB31 216 aaPredicted RBP3.16□□□□□ -1.9
VPS13B-208ENST00000521037 MYNNQ9NPC7 610 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 SLC52A3Q9NQ40 469 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 GLRX2Q9NS18 164 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 CA10Q9NS85 328 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 ZNF275Q9NSD4 429 aaPredicted RBP3.16□□□□□ -1.9
VPS13B-208ENST00000521037 SLC35D1Q9NTN3 355 aa3.16□□□□□ -1.9
VPS13B-208ENST00000521037 RCC2Q9P258 522 aaKnown RBP3.16□□□□□ -1.9
VPS13B-208ENST00000521037 PPIAL4EA0A075B759 164 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 TRBV5-3A0A0A0MS03 114 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 PPIAL4CA0A0B4J2A2 164 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 A0A0G2JMP0 313 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 A0A0X1KG70 313 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 IQANK1A0A1B0GTG1 560 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 GAGE12JA6NER3 117 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 FAM90A26D6RGX4 464 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 PPIAL4DF5H284 164 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 J3QR06 171 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 APOC4-APOC2K7ER74 178 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 M0R1B8 84 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 PGRMC1O00264 195 aaKnown RBP3.15□□□□□ -1.91
VPS13B-208ENST00000521037 DVL1O14640 695 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 TNFSF11O14788 317 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 SSX5O60225 188 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 MGRN1O60291 552 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 UGDHO60701 494 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 RAD51DO75771 328 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 GPR75O95800 540 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 PLGP00747 810 aaPredicted RBP3.15□□□□□ -1.91
VPS13B-208ENST00000521037 LHBP01229 141 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 IFNB1P01574 187 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 IGLV1-44P01699 117 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 APOC2P02655 101 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 SLC35E2BP0CK96 405 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 SLC35E2P0CK97 266 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 PPIAL4FP0DN26 164 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 GGT1P19440 569 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 DRD5P21918 477 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 HIST1H1TP22492 207 aaPredicted RBP3.15□□□□□ -1.91
VPS13B-208ENST00000521037 HSD17B3P37058 310 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 ARFIP1P53367 373 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 CTBP2P56545 445 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 MYBPC1Q00872 1141 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 GUCY2DQ02846 1103 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 C2orf54Q08AI8 447 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 UBE2V1Q13404 147 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 CUL3Q13618 768 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 EXOSC7Q15024 291 aaKnown RBP3.15□□□□□ -1.91
VPS13B-208ENST00000521037 DEFB112Q30KQ8 113 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 GLYR1Q49A26 553 aaPredicted RBP3.15□□□□□ -1.91
VPS13B-208ENST00000521037 TTMPQ5BVD1 217 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 CEP85LQ5SZL2 805 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 ASPHD1Q5U4P2 390 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 RAET1LQ5VY80 246 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 DUPD1Q68J44 220 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 ACSM5Q6NUN0 579 aa3.15□□□□□ -1.91
VPS13B-208ENST00000521037 FIP1L1Q6UN15 594 aaKnown RBP3.15□□□□□ -1.91
VPS13B-208ENST00000521037 CES3Q6UWW8 571 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms